ZMP
si:ch211-194d6.1
Ensembl ID:
ZFIN ID:
Description:
Syntaxin-binding protein 5-like [Source:UniProtKB/Swiss-Prot;Acc:Q5SQE2]
Human Orthologue:
STXBP5L
Human Description:
syntaxin binding protein 5-like [Source:HGNC Symbol;Acc:30757]
Mouse Orthologue:
Stxbp5l
Mouse Description:
syntaxin binding protein 5-like Gene [Source:MGI Symbol;Acc:MGI:2443815]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa31716 | Nonsense | Available for shipment | Available now |
| sa34660 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa34659 | Essential Splice Site | Available for shipment | Available now |
| sa2514 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa31716
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000017292 | Nonsense | 193 | 1159 | 5 | 26 |
| ENSDART00000138602 | None | None | 214 | None | 3 |
Genomic Location (Zv9):
Chromosome 9 (position 28554257)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 27709953 |
| GRCz11 | 9 | 27520699 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGTGGGAATACACACATAGTGAACATTGAATCCTTCATTTTGTCTGGATA[T/A]GTCATCATGTGGAACAAGGCCATTGAACTGTGAGTACAAGCTGTTTTGCT
Long Flanking Sequence:
TTTTAATTAACAGTTCAGCTTTAGTTGAAAGATGAGCAAGGACATGCTGAAAAATGTTAGAGACTGAACAAAACTTTAAACCCACCAATATACAGTGTAATTTGGCTCTTTTCCTTGTTCATGGTTCAGTGTGTAAACACATTCTGGTAATGAATATGCATTAATGCACATTGCAGTTTTATAGGATTTTGTAATTACATCTTAAGCATTCAGGGAAAAAATGGTGTACATGCAATGAATAAAAACTGTGAAGCATATTAATTAAAAAGATAATTAATGGCTTGCAAGTTCTTCATCATGAGATAATAATTACATACTATAATATGATGTTGACATATCCTGTGAAGTGTTCTCTCATTCCCTCAAATATGATTCCTCTTTTTTTTCTCTTCTAGGATCACATTTTGTCATCTTCCATTTCAAAGTAAATGGCTTTACGTGGGGACGGAGCGTGGGAATACACACATAGTGAACATTGAATCCTTCATTTTGTCTGGATA[T/A]GTCATCATGTGGAACAAGGCCATTGAACTGTGAGTACAAGCTGTTTTGCTTTGTATAATCATCTACCTAACATGAAAGTTTTGCTTTATGGAAAAAAAATCTACCTAAAAGTTTAGCTAACATGACTAATAGGAGCTAATCAATATAAAGCCTGAGTGCCCACGCTTGCAAAAATATGTGTATCTATTAAAGATGGCGATGATGATGATGTGATACTCTGTCATCTGGAATATGAGACGATTATAAATGCAATTATCAAAATAAATCTGCAGTTTCAGGGAGGAATATTGGAGGTTTAGCACAGTTATACTCCTATGGGAATAATCTACCCCCAACATAAAAACTCTGTCATGATTTAATCAACGTCATGTTAGGGCTGGGTGATAAATTGAAATGAAATTAAAATCGTGATTTAGCAAAAGCTGTGATTGTCATGCACATGAGAAGCATGGTTCTAGCATCAGATGTAAATCCAAAGTAGTAAATCTGAAGGCCAGAGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34660
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000017292 | Essential Splice Site | 482 | 1159 | 14 | 26 |
| ENSDART00000138602 | None | None | 214 | None | 3 |
Genomic Location (Zv9):
Chromosome 9 (position 28507016)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 27662712 |
| GRCz11 | 9 | 27473458 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCCACAGACATGCAGACGGATCGATAAAGTTTTGGGATGCCACAGCGAG[T/C]AAGTGTCTTAGCTTTGAAGAGCTTGTGCTTCTCTTTCAGCCTCATGCTGT
Long Flanking Sequence:
AATAATAATAATAACAACAATAATAATAATAACAACAATAATAATAATAATAAATCATCCTACACAAGGTGATGCTTCTCACCTAAAAAAGTTTGACACCCCTGGCTCAAAAAGTAAAGTTTCCACCCATATATGGAGGTCATTTATCGTATTTTTATTTGCTTGAAAACTGTGGATTGATTTCGTTTTTGTTTTAAAGCATACATTGATTGCATTTATTTTCACTTAAAATCAATAATGTCTAAAATGTGCCCTTCTCCTTGGCTCTCAGTGGCAAATCTTTTGCACTTCTCCACTTTAATTCAATAGCGCTATTGACCCTGTGGGTTGTTCTCTCTTCCTCTTTTCCCTCCTGTTTCCGAAGCCTTCGCTGCTTGCTTCCTCGTAAGAGGTTTAACACACAAACTCATTCGCTCATGCGATCACTCTTTGTCTTTCCTTTTTGTTGTCCCCCACAGACATGCAGACGGATCGATAAAGTTTTGGGATGCCACAGCGAG[T/C]AAGTGTCTTAGCTTTGAAGAGCTTGTGCTTCTCTTTCAGCCTCATGCTGTTTCCATCCCACACTTTCTCATCACTGCTTCATTTCAGATGAATATTATCTATTGATGCTTTGCCATAGGATTTTTCATTTGTATAATTCAAAGCAAAATATGTCTTGCTTTAAAAAAAAAACTCTCTACTTTTTCTGTTTTTCTAAAGTTCTCCTTCATATGTATTTTTTTTTTTAAACAACGTCTGCAGCTTTGTAATAATGGTTCTTCTCGTGATTATTTACTTCTTTATGGGGATTGTGCTGTGTTACTCATTTGTAAGTCACTTTGGATTAAAGTGTCTGCTAAATTAATTAATGTAAATGCAAAGTAAATGACCAAAATGAACATCCAATGATCAAATAACAACTGCAAATAATAAATATTCCTGGTTCAGTGCATGTTAAGCGCAGCAGAATGCATTTAGGGTGTAATTTACGCACACACACACAAACACAGTCAGGTCATTAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34659
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000017292 | Essential Splice Site | 1072 | 1159 | 24 | 26 |
| ENSDART00000138602 | None | None | 214 | None | 3 |
Genomic Location (Zv9):
Chromosome 9 (position 28454960)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 27610656 |
| GRCz11 | 9 | 27421402 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAAGGGCTTTTTTGGTGGCAATGCCCAAACCTTCGACAGAGAGGAGTTAT[G/T]TGAGTGTGCATATATTTATCAAGCCCCCCTCACCCCCTCTTTCTCTCGGT
Long Flanking Sequence:
ATATATATAGTTCAAGCCTGAAATTAATTATTTATAAAAATATAAGTTTTTGCCTAAATTGAAAAGGAAAATCAGAAGATGACTGAAAGGCTTGCTGCTATTATTAGTGTCCACTACAATGTGGCATACATCACTGTTGTTTGAACTGTTCACTGTGGACTGCTTAGTATTCTGTAAGCATACCATAGTAGTTCAATTCAAACTATAGCCTCTCTTCTTTTCTAACTGCCCATCAAGCACTCAAGATAGAAAGTTAAATCTTTGTTCATTGTACAACATGTAACTGTACTGACATCTGCTGGTGGGATTTTGAACTAGCTATCTTTTTCATTCTATTATTTGTACTGGTTTGTTTCAAACCTTTTGATATGCTGTTCATTAATTGCAGGAGACATTAGGGGAGCTTTTTACACCCATCGAGACCCCTGAGGCTCAGAACCGTGGCTTTCTTAAGGGCTTTTTTGGTGGCAATGCCCAAACCTTCGACAGAGAGGAGTTAT[G/T]TGAGTGTGCATATATTTATCAAGCCCCCCTCACCCCCTCTTTCTCTCGGTCTCTCTCATATGTGCATATTTTTTACTACCACACTAAATTCTTGTACTTGAGTTGAGTTTAGCACTTGAAGATTATGCTGAATAGGATAATACTGTCTGATTGGCATTGGCATATAAAGTGAATAGATTTAAAGTTAAACAGTAAATCATTCATTTGTTAGGTCTGACATAATGCATTATAATCCACTGGTTTAAATGCTATCAGATGTGAAGTATTAGCTCTCATATAACTACATTTTTTATTATAAAAAATAAAGATTGTAGACTTTATATTGTTACTAAAATCTGAAATGGGCAGAGAATGATTCAACTCTATACTGTGAATGTTGTGACTGAATCTTAAAGAGCACATCATATGTGTATTCTCAAGATGGTCTGATAAGTGCTTCCAACTTAAAATTGTAAAGAATACTATTGAGGCTTGGAAGCCTGGAAACAGCATTCCATACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2514
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000017292 | Nonsense | 1156 | 1159 | 26 | 26 |
| ENSDART00000138602 | None | None | 214 | None | 3 |
Genomic Location (Zv9):
Chromosome 9 (position 28449752)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 27605448 |
| GRCz11 | 9 | 27416194 |
KASP Assay ID:
554-3208.1 (used for ordering genotyping assays)
KASP Sequence:
GCTTTTCCTTTTTTTCCACAGCTAATGCTTAAATGCAAAGRCAAGAAGTG[G/A]TATCAGTTTTAGAGGGTCCTCTTGGAGGCGTGTTTCACTGTCRTGCCACA
Long Flanking Sequence:
TATCCTTCATTGCAAAAATACAAAAGTTCCAGTAGATCAGCAGTTTCAGAAATGCTTATACCAGCCTGTCTGGCACCAACAACCATGGCACCTTCAAAGTCAATCAAATTACCTTTCTTTCCGATTCTGATGCATTTGGCTTTCTCTTGTTAAATAGTTGGCGAGGCATCGGCGGGTAAGGCATCACGCAGCCTGGCACAGCACATCCCAGGACAAGGTGGTATAGAGGGCATGAAGGCGGCAGCAGGCGGAGTGGTTGGGGATTTGGCTCGAGCTCGCATCGCCCTGGATGAGAGAGGACAGAGGTTAGGGGAGCTAGAAGAAAGGACTGCTCTGATGATGACCAGCGCAGAAACTTTCTCTAAACACGCTCATGAGGTATGAAGGAAAACAAAAGAATGAGAAGTATGAAATACAGTAAAAGCACTAATGCACATGTTTAAATGTTTTGCTTTTCCTTTTTTTCCACAGCTAATGCTTAAATGCAAAGACAAGAAGTG[G/A]TATCAGTTTTAGAGGGTCCTCTTGGAGGCGTGTTTCACTGTCGTGCCACAAGAGGGCGCAACTCTGGTACTTGGACTTTCACTCTTTAAAAGAGAAGAGACAGAGCGAGCAAGACTGATGGACCAAGAGGGACTTAAGGGCTGTTCAGATTCTCTTCTGTCTGTGTACAGGACTGACTTAAAGAGGTTAAAAAGGCAAAGGCCAGATCACGATATTGGGAGATGTACCATTAGTATTTGAGAGTAAGAGGAATTCTATACCCACAATGTAAATCCGACGACATCTTCATTTATGTACAGGGGTTGACCAGGGTCTCCTCACAACAAGTAAACTGACTCTCGCCGTGTAGATAATGGGAAAGTTACGAAATCAACAAGAGTGCATGAAACAAAATGGATGACCTATAAAAACGTAAAACTGCCATATTAAAAAGCAGCATGTTACTTTAAAACAAAAGGTAAATAAAAGATTAACAAACTTTTATTTAATAACCTAAGCCA
Associated Phenotype:
Not determined