ZMP
cd9a
Ensembl ID:
ZFIN ID:
Description:
CD9 antigen [Source:RefSeq peptide;Acc:NP_997784]
Human Orthologue:
CD9
Human Description:
CD9 molecule [Source:HGNC Symbol;Acc:1709]
Mouse Orthologue:
Cd9
Mouse Description:
CD9 antigen Gene [Source:MGI Symbol;Acc:MGI:88348]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa6498 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
This allele has been removed from public view.
Allele Name:
sa28971
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000019571 | None | None | 227 | None | 8 |
| ENSDART00000135587 | Essential Splice Site | 23 | 228 | 1 | 8 |
The following transcripts of ENSDARG00000005842 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 18 (position 6229453)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 7184554 |
| GRCz11 | 18 | 7143516 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGAGATGTGCGTCAAATACCTGATGTTCGTCTTCAATTTCATCTTCTGG[G/T]TAAGCCCGTGTGTGTTCTGTGTCTGGTGTGTGTGTGTGTGTGTGTGTGTG
Long Flanking Sequence:
CATACATGTCAATGAAAAAAACGTGCAAAGAGAGAGTAAGAAGAACAGTGCAAGAAACCTCAGGGCTTTGCTCTGACTGAGTGACGTCATTCCATCATGACGTAATTCCCAGCGAATAAAGACCGAGGGGCTTTTACCCTTAAAATAAACGAATAGGACAAAAATCCTCGAAAGAGTGAGTCTATTTGCAATTGATTTCGTTGTCTAACCCTTCAAAACAGTTACAGGTGCAGATACTGTCGCAGCTTTGATTTCGCCAATTGCAAAGTTGATGTTTGACAGCAGGACTGAGGCAGTGTGAGTTTGTCTCGGTCGTGAGTTTCCCGTGAGACACACACACACACCGCCGCCTGCGAGACACCGGACGGATCGCTCCCGTGATCTTTACTCTGTCATTCAGCACCGTGTGTGGCGGAGCACAGACTGCTGAGATGGCGGCGCTGACCGGAGGAGAGATGTGCGTCAAATACCTGATGTTCGTCTTCAATTTCATCTTCTGG[G/T]TAAGCCCGTGTGTGTTCTGTGTCTGGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGGGGTTTACTCGCGCTCGGGACGCTGTTTTATATCACTCGCGCTTTTCTCCAGGGGTTTGATTCATTGATAAATAAATGCGTGTGCATGGCGTCCTGTTTGGAAATTGTTAATTGGTTTATTTTGCAATTAATTACGCGGGAACGTCTGTGTGAAGCCATGCAACCGAATTACATCCATTTAGCTGACCTAATTTGAAGGATTTCAGAACCCTTAAAACACCGTGTGTGTTTCTGTGAGAGACGGTTGATGTGTCTTCTGTGTGTATTTTCGGGACAAGCACTGCATTTTGATAGTGTTTTCTGTGACTGCTCTCTGTTCGTGTTTGTTTGCCTCAGCTGTTCTCTCCGACGGCTGGACAGACGCGTTCTTTATGGTGTCCGCTTCCTGAATTAATCATTTGAACCGACTCTCTTAAATGATTCGTTTGAACCGATTCGTCGTTTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6498
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000019571 | Essential Splice Site | 89 | 227 | None | 8 |
| ENSDART00000135587 | Essential Splice Site | 90 | 228 | None | 8 |
The following transcripts of ENSDARG00000005842 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 18 (position 6217877)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 7172978 |
| GRCz11 | 18 | 7131940 |
KASP Assay ID:
554-4788.1 (used for ordering genotyping assays)
KASP Sequence:
TTTCGGATGTTGCGGAGCCATCCAGGAGTCCCCTTGCATGCTGGGATTGG[T/C]AATGCACATATYATGCAGCTTGTAATATCTGTATATACARTTGAAGTCAR
Long Flanking Sequence:
TAATTTCCCCGTGGCAGTAATTATCCACAGTCGATTGGCTATAAAAAACTGGGCCAAAACTAAGTGGCCTTAGATGAATGAGCATGTTAAGGGAAGGCTTTTAGACCGATTTACTCCATATCTGCTCCTTTATCTGTTTTTATTTTAATGTCAACATATAATAACTTCGATTTGTGTTCATGTTAATGCATTGGTCAGATAAAGCGATTTGTGTGGTTTTGTTGCAGATCGCAGGCACGGCTGTCTTGGCTGTTGGACTGTGGCTGAGGTTTGATCCCAAGACCAAGAGTTTGTTCGAAGGGGAAAACTCTCCTTATGTCTTCTACACAGGTCAGCAGAGATGTGCTTTAATCAGATGTGATGTGACCGGCTGCCTTCACACTGAGTTGTTTGTGTTGCAGGAGTGTATATCCTCATTGCGGCCGGTGCGCTCATGATGGTGGTGGGATTTTTCGGATGTTGCGGAGCCATCCAGGAGTCCCCTTGCATGCTGGGATTGG[T/C]AATGCACATATCATGCAGCTTGTAATATCTGTATATACAGTTGAAGTCAGAATTATTTGCTCTCCTGAATTATTAGACCCCCTGTATATTTTTCACCAGTTTCTGTTTAATGAAAAGACATTAGAAACATATTTTAATCATAATAGTTTTAATAACTCATTACTAATAAGGAGTTATTTTATCTTTGCCATGATGACAGTACATAACATTTGACTAGATATTTTTCAAGATACTAGTATTCAGCTTAAAGTGACATTTAAAGGCTTAACTAGGTTAATAGAGTGGAGGAACCATGGCGTCACCTTGTAGGCTAATCGGCTGCAAGCATAAAACTGGTTCCCAAGATACAATACCTATAGAAATTCCCAATAGGCTTTTCGAAGATTGCAAATAATAAGCTCTGTGTTCAAACACTGTTCATTACACTTGCACTTTTTGCCCAACCGGATAATCCTCACATGAAAATACAACTTTAAGCACTTTTGTATCTTAAATGCAAT
Associated Phenotype:
Not determined