Busch Lab

ZMP

si:dkey-202b22.4

Ensembl ID:
ENSDARG00000005547
ZFIN ID:
ZDB-GENE-041210-174
Description:
RAD50-interacting protein 1 [Source:RefSeq peptide;Acc:NP_001038468]
Human Orthologue:
RINT1
Human Description:
RAD50 interactor 1 [Source:HGNC Symbol;Acc:21876]
Mouse Orthologue:
Rint1
Mouse Description:
RAD50 interactor 1 Gene [Source:MGI Symbol;Acc:MGI:1916233]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa33450 Nonsense Available for shipment Available now
sa33449 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa31393 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa33450
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000045639 Nonsense 162 780 3 13
Genomic Location (Zv9):
Chromosome 4 (position 17577430)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 18520270
GRCz11 4 18509246
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTTTTCTTTGCTTCTTTTATGCTGCATCAGTGACAGTATCCAGCAGTA[T/A]CTGATGACCAATAGTGTGTGGGATGCGGTCAGAGCCATTGACAGTATGGC
Long Flanking Sequence:
TGTCTGTTTGCTGTTTTTTTTTTCTGAATTATGGAGTGATAAAAGAGGTTCCCCGAATCTCCCCTGTAAAAAAAACTACTTCAGATTTTTCTGCTAGAATTGTATGCAAATTAGCCTACATTTAATTAAACAATGCCTATTTTAATATAATCAATCAACTGCACAAGTATAGTGATCCAGTAACTATTACCTCATTTCTTTCCCTGTACACCTATACAGCAGTGGTGTCAAACTGAGTTCCTGGAGGGCCGGTTTAGTGCACTGTTTAGTTCCAACCCTGCTTCAACACACTTACCTGTAGGTCTTAAACCAGCCTGAAGAACTCAAATAGTTGGATCTGGTTTGTTTAAATATGGCTGGAACTAAAGTGTGCAGAGCTGCGGCCCTCCAGGAACTCAGTTCGACACATACAGTGTATTGCCTAAAAAATTATAATAACGTAACAGAGATTTTTTTTCTTTGCTTCTTTTATGCTGCATCAGTGACAGTATCCAGCAGTA[T/A]CTGATGACCAATAGTGTGTGGGATGCGGTCAGAGCCATTGACAGTATGGCGTCTCTGGATATGGATTTGAGGGAGTCAGGCTGTCTCCACCTGCAGGCTTTCCTCAGAGAGACACTTCGGTTTTGGCACAAGATCCTTAAAGACAAACTGACCAGGTGTGAAACTCACAGGACGTTTAGAGTTAGTATAAATGCTTCTGAGATGATGCTAAATGTTTAGTTGTGTTTCAGTGATTTCGAGGAAGTCCTGACGCAGTTACACTGGCCGTTCATCTCAGCCCCGACACAGACTCTCTCTCCTCCAGCAAACGCACAGGAGCTCAACAGCCAGCTGGAGCTGCTCGTCTCCCAGCTTCTGTCTCTACAGACCTCGTATCCTTAATATTCTGCTGAATAGACTTCAGTACTGATGCAGTTTCTCAGTGTATGTCACTGGAGTGTCAGACTGATCCAGGCTCGCAAAGAATTATGCAAAAGTTAATATTCCTTGTTAAATTTTCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33449
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000045639 Essential Splice Site 539 780 10 13
Genomic Location (Zv9):
Chromosome 4 (position 17571733)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 18514573
GRCz11 4 18503549
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACATCCTGATGGAGATCAGAAATGCTTACTTGTATGGTATTTTGTCTCA[G/A]TTCTTCTTGCAGTTGCAGCAGGCTGCAGTTTCAGTGGGCGAGGAAATCCT
Long Flanking Sequence:
TATTTATTATTATTTGTCAAATAAATTTATATATATATATATATATATATATATATATATACGACTGGAGTAATGACTCAGATATGACAATTAAATGCATTTTAAAAAATATATTAAAATAGTAAATATATCAATATTTTACAAAATATGCATTTTAAAAAAGTTTTTTAATAAATTAGGATCTTTAATCTTGTATGTGATCAAAGAACAGGTGTATAAGGAATATTCGTTTGGTTTTTAAATAAGGGTTACCATTTGATATTTTAGGCTCTTTAAATTTGAACATTTCTAAAAGTTCACATATAAAAAAAAACAATATCAATTATACAAAATATAACGTATATTATTTTATTTATTTAACAAAAATGAAGATAAAACGAAAGAGTCTTCCTTACACTTTACTAACACATTATATTAAATAGAATAATAAAAATAATATGAACCTTTTTCTACATCCTGATGGAGATCAGAAATGCTTACTTGTATGGTATTTTGTCTCA[G/A]TTCTTCTTGCAGTTGCAGCAGGCTGCAGTTTCAGTGGGCGAGGAAATCCTGGGCCCTTTAGGGGCCACAGAGAGCGGCAGACTGGCCTCTCTGGAGGGATCTTTGTTTGAGGAACTGTTGGCTCTGTTGGAGAGGCTGCGAGGAGACATGCTGGGCCGATTACTAGACGCAGTCATGAGAGACGTCAAGGAGAAGGCACAGCCATACTGCAAAGACAGGTATAAGTAAAAAAAAATACAGCCAGCAGATGTGCTAGTAATATATATTTAATTGATTCAACATGCTGTTTTTCACTGTAGATTTTTACTGGAAAATTATTGAATATTTAAATTTATATACAGTTAAATTTTTATTTCTTTATTAAATATTTCCCAAATGATGTTTAACAGAGCAAGGAAATTTTCACAGCATGTCTGATAATCATTTTTCTTTTGGAGAAAGTCTTATTTGTTTTATTTAGGCTAGAATAAAAGCAGTTTTTAATTTTTAAAAAACCATTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31393
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000045639 Nonsense 733 780 13 13
Genomic Location (Zv9):
Chromosome 4 (position 17568573)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 18511413
GRCz11 4 18500389
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATCATCTTGACTCTAAAAGTGGGTCCGGCGCTGTTGCTATTAGACGTTT[T/A]GAAACAGTCAGAAGAAGATAGTCTTCCCAACCATCAACAGTCCAGTCCAG
Long Flanking Sequence:
GTGAAGCAAAAGCCTGTTAAAAGTGTTTATATGCATTATCTTCTAATAATTTAATTGACCAAAGTACATTATTACATCTATACTAAGGTTAACAAACCTAAAAACATTGTTCAGATGTTATATTTCAAGACATTTATTAGGTTTTTTGTCTTCAAACGGCTTTTGTGTCAAGGACATGCTTACACATCCATAGCATTTTTTAAATTTATGTTTTGACTGTATTTTTAAAGATATTTTTTTTTTATTTTAGGTATCATGGAACTCTAATTCAGTAAAGGAATGACTTTATCTCTGGATTTACAATTAAAATAATTGCAAATCTTATCATGTTTATCAGCCAATCAGAATCTAGCATTGAAAAGGTTCATAGTATAATCTGTTTCTGAAATAATGGATAGAAAAACCTCATTGTTATTTCTCTCTTCCTCATGTTAGTGTGAAGGAGGCCTGCATCATCTTGACTCTAAAAGTGGGTCCGGCGCTGTTGCTATTAGACGTTT[T/A]GAAACAGTCAGAAGAAGATAGTCTTCCCAACCATCAACAGTCCAGTCCAGAATCTGCACTCAATGAGCTGGGAATCTACAAACTGGCCCCGAGTGACGTGCAGATCCTCCTGAACCTCCGCTCAGCCTGGCTCAATCAATCATAACTTGCATCAATCCCATAATCACACAACACAGAATTATAGACGCTTTACCCAGCACTAAAACACATCTCATGTGACTGAATAAAATATCCTACGTCCACTAATGTTTCAATAGTATTTAAGATGAACTGAAACTCTGAAGGGAAATGTGAAGAGTTCATGATTTCAGATGTAAACAGAAATGTAAAAAGGAGAACAAAAGCTTTGCCTTCCACCAAAAACAAACAAATAAATTAATACGTTTTAGTGCTTTCTTCTTTATTTGGTGTTAAATCAATAATTTTATAGCACATTAAATATAAATAGTTGGGGTATACTGATTTATCTCATTCATCTAGTGCAGATTAAGCTGTGGGTT
Associated Phenotype:
Not determined