Busch Lab

ZMP

nav3

Ensembl ID:
ENSDARG00000005476
ZFIN ID:
ZDB-GENE-021205-1
Description:
Neuron navigator 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5TZ18]
Human Orthologue:
NAV3
Human Description:
neuron navigator 3 [Source:HGNC Symbol;Acc:15998]
Mouse Orthologue:
Nav3
Mouse Description:
neuron navigator 3 Gene [Source:MGI Symbol;Acc:MGI:2183703]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa20270 Nonsense Available for shipment Available now
sa40289 Nonsense Mutation detected in F1 DNA Not yet available
sa9110 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa44589 Nonsense Mutation detected in F1 DNA Not yet available
sa40290 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa20270
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000005847 Nonsense 435 2269 8 37
ENSDART00000036886 Nonsense 267 527 4 6
ENSDART00000110767 Nonsense 409 2300 8 41
ENSDART00000143674 None None 117 None 7
Genomic Location (Zv9):
Chromosome 4 (position 19838901)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 21182236
GRCz11 4 20903211
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCCAAGCAAGTCCAACAACTGTAAGAACCACAACAATAAGTCCTTGCCA[C/T]AACCCAAAGACAAAGAGGACAAGAACAAGACCAAGAACAAAGCCAGCACA
Long Flanking Sequence:
GCATCCCTCTGCCAGGCAGCATGAACGGCAGTGGCTCAGTGCCTTCCAGCACCAGCGGGCAGCAGCTGGCCTCTGCCATTCCCTCTCCCACTGCTGGAAAGACCTGGCGCAGCAAGTCCATGAACATGAAGCACAGTGCCACCTCGTCCATGCTGGCCACTAAGCCGCCCAGCCCAACCTCATCCCCTACCCCTCCCTCATCATCCGATCGCCTCCGGCCCCCAATCACAGATGCCTCCAAATCAGCCCCCGGTAACCAGCGTTCCATGTTGGAAAAGTTCCGGATCCTCAACCCTCGCGCCACATCCAGAACCTCTCCCTCTGTGGCTGAAATGGCTCTCCAGGAGGAGGATGACTTGTCAGAGTTTGGAGATGAGGGAACTTTCAGTCCTACACCACCCTGCGGGATCTCAAAACAGCAGGGGAAGCCCTCTGCATCTGCATTTGCACCCCCAAGCAAGTCCAACAACTGTAAGAACCACAACAATAAGTCCTTGCCA[C/T]AACCCAAAGACAAAGAGGACAAGAACAAGACCAAGAACAAAGCCAGCACACCTCCCAAAGAAGAGCCAGTAATAGTGGAGACCTCAAAGAAAGGCTCCAAGATTGCTAGCCTCATCCCCAAAGGAAGCAAAACATCCGCTGCCTCTGTGAAGAAAGAAAGTGCAATCCCTGCCTCCAGCAGTATCCCCAAGCCTGGTCTGAAAGCTCCAACAGCAACCTCCAAACCTGCAGGAACCCAATCTTGTGTACCTGCAACTACCGGTGGGGAGAAGACCAAACTTAACAAGGGCAGTCAGTCCATATATATGCAGAGATCTCTGGGAGGCTTGGAGAACCGTAAGACCAGCATGGTGTTGTCAACCAGTACCTCAGCTCTTTCTGCATCCACCACTTCAGGACTGGGGGGTGGTTGTGCTCTAGGTGGTAATGGAGCAGTACAGCTTCCCCAGCAGCAACAACATAACCATCCCAACACAGCGACAGTCGCCCCCTTTATGTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40289
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000005847 Nonsense 1572 2269 23 37
ENSDART00000036886 None None 527 None 6
ENSDART00000110767 Nonsense 1575 2300 26 41
ENSDART00000143674 None None 117 None 7
Genomic Location (Zv9):
Chromosome 4 (position 19901127)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 21244462
GRCz11 4 20965437
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTGTTGCAGGAGTCTGAGCTGGCGGAGTTGAGAGAGACAATTGAGGCTT[T/A]GAAAACTCAGAACACAGATGCTCAGACGGCCATTCAAGTGGCCCTTAATG
Long Flanking Sequence:
TTTACAGTTAGAAATTTACTAAATCATGGAAGATGATTTTTACTTAACATTCAATTTTTTTTTTCATTTTGATCTATACAATGTTTTTTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTTTTTGTTTTTTTTTTGCTTTATCCAAAATATGCTTGTGCAACATAAGATTTCGTAGTAAAGATACACATTTACATTTACTTTCAATTCAAATGCCATGAAGAATATATTCATGCTCAGAACACAAATTAAGATATTTTAGTTTTCTGTCACTAAAAGCTGTACACCCAAAACCGTTTACACCTTACAAAAAAGGTTTTTTAAAAATAAATCCATCTGATTCAAGCAGTTTAATTCATACCTAACTATGGCTTCCTAGGAAGATTTGACAATTGTAAGCAGTCGAGATAAAAAGTGTTTTGTGTTTGTATTGAATATCTGTTTTTATTTGTGTTGCAGGAGTCTGAGCTGGCGGAGTTGAGAGAGACAATTGAGGCTT[T/A]GAAAACTCAGAACACAGATGCTCAGACGGCCATTCAAGTGGCCCTTAATGGTCCTGATCACGTTCATAGAGGTACTGCTTCTGTCCTTTTTGTTTCACAATTACTGAAGAAAATGGTCTTTTTTTGGTCCATCAGTTTTGGTTACACATGTTTTTGGGTAAAATGATTCAACTCCATAGGAATTCAAAGAATTGGGAATTTATAAAAAGGGTTAAAAAAATTTCCACACTTTTGCAATAGGTTCAAGTTTGAATTTGTAAATGTATATGCCGGTTTTGCTTTATATATTGCTGCACTATTTGCAATAGATCATCAATCTTTTCATCGTTACATTTTTTTGGGATTGTGCATCTTTGACTGTACATATAACAATCTAAAGGCATAGTATGTGTGATTTATTTTATTACAATATCCCAAAAACACTAGAATAGTGTTTTATAACTTGCTGACTTTTTATTAGACTGCACAGATCATAGGAAATGTAACTCCCATGATTTCAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9110
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000005847 Essential Splice Site 1809 2269 27 37
ENSDART00000036886 None None 527 None 6
ENSDART00000110767 Essential Splice Site 1813 2300 30 41
ENSDART00000143674 None None 117 None 7
Genomic Location (Zv9):
Chromosome 4 (position 19910075)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 21253410
GRCz11 4 20974385
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTAGGGCTMTCGCTAAACAACCTCAACATCACCGACACCATTATGTCAGG[T/C]TAGTCCTTSCTTCATGTTWTAAAATTTTGAAGCTGTTTGGGTCTAAAAAT
Long Flanking Sequence:
TCGATAAAAAGCACAAAATTGCTTTAATTTCATGTTAAAGTTATTCATCTTTTGTGTGCCTGATACACAGTCTTTAAAAGCTTTAGAAAAAGTTTTGAAATCTAGGCAACATAATGCAAGAGCTGATCTTCTTAACTTAAGTGTATTTCACTGTGTTTGTGGAAAAAATCTTTTTAACTTTTTTTGAATGTAAAGTTTTTTTTTTTTTTATCACAGAATTCTACATGTGGACTGCACATGTTTCTGTTCAATTTTGGATACTATACATATATTTTTAGTGTTGACTGTACATGTTTTTTTTTTTAATTGCAGAATGAGATTGAGCTGCTGAAGGCAGAGAACGACAGACTCAAGTCCAGTGGCAACACTACACCTGCTGCTACACCTGCTAAAACAGCCCGTCCTCCATCAGAAACCTCTAGCACGTCCTCCTCATCCTCACGTCAGTCTCTAGGGCTCTCGCTAAACAACCTCAACATCACCGACACCATTATGTCAGG[T/C]TAGTCCTTGCTTCATGTTTTAAAATTTTGAAGCTGTTTGGGTCTAAAAATTGTATTTCAGAATGTATCATTAAATTATTGCAATGGTTGTTGCTACTAGTGATCATGATTTCCCATTTAATAGCAAATTGGCCTACTCTGATACAGATTTCTGATTCTTATTTTTTTATTTTATAGAAACCAGAAAAAAATAAAATGCTAGAAAAATGTTTATGTGCTTAATCACAGGCTGAATCTGCAGCGATTTAATATTAGAGTCAACAACTGCTTTTTAATCATGATCCACACAAAGAGCAACATGCATTATCTTGGGTAGTTGGTGATCATGATGATCATATTTGATAGGTATTATACAGATCTAAAAAGTAATTACAGTTTAAACTTTTAATATGACAGTGTGTTTCATTAAAAATAACCTAATAAAACCCTTTAAAACACTATTTAAGATCTACCTCCAGTATTTCATACATAATCAACAGTACGTGTGCCGGAGAGTCTTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44589
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000005847 Nonsense 1864 2269 29 37
ENSDART00000036886 None None 527 None 6
ENSDART00000110767 Nonsense 1868 2300 32 41
ENSDART00000143674 None None 116 None 7
Genomic Location (Zv9):
Chromosome 4 (position 19911941)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 21255276
GRCz11 4 20976251
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTATCTTATTGGGTCCATTGGCGTCAGTGGCAAGACCAAGTGGGATGTGT[T/A]GGATGGAGTAATACGACGCTTGTTTAAGGTGCCAGTTTAGCTCACTTAAA
Long Flanking Sequence:
TTTTTCCACTATTCAAAGACTTGTTAATACCAAACAGCTCAGCCTTACAGACAACAAAGCTTAAAGCAGTCGGCATTTAACTACAGTCAGAACTGAACATTAGCGTCTCCATTTGGTGAATTTGTCAGCGCTGAAAAGGTTCTTCTCCCGCACAGTCAATGACTCACTTGCCGATAAGTCTATGAGTTGTTCAGCCTTTGATATTTTAGTCATGCAGTGAGTTTGTTTTTTGTGTGTACACAGATATTTTGCTGGATGACGGCTATGAGGGCAACTTACGTAAAGAGGGCAGGAGCGTCCGAATAGTGGTCACCATCAACAGTGACTCCAACAAGACCAAGGTACAGAGAGATTTTTACTAGTCTGTTTTAACTCCAGTAGCTATTTTGATAGAAACTAGTCATCAACATCTCATGTTCTCTTCTCGTCAAAGGCTATGCAGAAGAAGCAGTATCTTATTGGGTCCATTGGCGTCAGTGGCAAGACCAAGTGGGATGTGT[T/A]GGATGGAGTAATACGACGCTTGTTTAAGGTGCCAGTTTAGCTCACTTAAATGTAGATTTGGGATGCAATTCTTCAAGTCTAACAGATTAATTGTGGTTGTTTTAGGAGTATGTGTTTCGCGTGGATCCATTGACCAGTCTGGGCATGAATTCAGACAGTATAGTGTGCTACAGAATGGGGGATGTGGTTCGATCTCACGCTTCTGAGGTGCCTGAACTGTTGCCCTGTGGATATCTGGTCGGCGATAACAATGTTATCACAGTCACGCTCAAAGGTAAGGAACTGCAAAACATTCATGAAGGGTCCTCATAGAGGTAACAAAATTTTCAGCCAAAATTGGGAAATATTTCATATGTTTTCCCTGTTTGTTTACATGACAAGGTTTTTTGGGAAGTGTAATTTAAAAGTGCAAACAAGCATGCACAGTGTTTCTGCTCAAGTGTTTCCCAACACTTCATCAGCAAAGAGTGGATTTACTTCACATTACAACCAAAAGACAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40290
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000005847 None None 2269 None 37
ENSDART00000036886 None None 527 None 6
ENSDART00000110767 Essential Splice Site 2194 2300 39 41
ENSDART00000143674 None None 117 None 7
Genomic Location (Zv9):
Chromosome 4 (position 19916773)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 21260108
GRCz11 4 20981083
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTCACAGTCTGCAGCTAAAACCTTTGTTTTTTTATTTAATCATTGCTCC[A/C]GCTGTATGGTAAGAGGGCAGCATGGGAAGACCCTTCCAAATGGGTAATTG
Long Flanking Sequence:
CCACCAAATCATACATGCCCTGAGAATTTAAGGTACAATACTGCATATGACATGTCGCATGGGATAATTTTTTTTACACTCTGTTCTGTTTTTTGCTTCACTGCTGTAATGTAAAGTAGCATAAGCAAAACATTGCTGAAATGATGTACATTTATATTATGTAAAAAAATGTTAGTACTGCCATGTTTGACGATTATGTGCTCAATTTTATTTTTATGGTGAACTTTCCATTTTACATACTCAGTTTGGTTATTTCAATCATTTTAAAATATTTAATCATGTCACTTACAGGGCCTCGACTGTTCCTGTCTTGTCCAATGGATGCAGACGGCTCACGTGTGTGGTTTACTGACCTGTGGAACTATTCTCTAGTGCCATATCTACTGGAAGCAGTACGTGAAGGACTGCAGGTATACATTCAACCAAGCACATCTAGATACTGTGTTTGTTTCTCACAGTCTGCAGCTAAAACCTTTGTTTTTTTATTTAATCATTGCTCC[A/C]GCTGTATGGTAAGAGGGCAGCATGGGAAGACCCTTCCAAATGGGTAATTGACACCTACCCATGGAGCTCTGCCTCTCTTCAGCATGAAGGCCAATCACTGTTGCAGCTGCGGCCGGAGGATGTGGGTTATGATGGTTACAGCTCCTCTAAAGATGGAGCTGCCTCCAAACAAGTTTCTCAGAGCGACACAGAGGGAGACCCACTGGTAAAGATCGCTTCATAAAACACATTTCTTTTAGATATACACTACTGTTCAAAAGTATGGGGTTTGGTCAAAATAGTTATTCTATTTTAATATATGAAAATATATATTTATTCCTGCAAATATTCATTGTTAGCATTATTATTCCAGCCTTCAGTGTAACAGTTTTCCAGAAATCATTAGAATAGTCTGGTTTTGCTTTCTAAGCATTATTTTTATAGTCATATTATTATTATTATTATTATGTGTAGTCCCATTATTATCAATGTTGATAGCATGTTTGCCTAATTAGGTTGAA
Associated Phenotype:
Not determined