Busch Lab

ZMP

trim3b

Ensembl ID:
ENSDARG00000005397
ZFIN ID:
ZDB-GENE-070112-1132
Description:
tripartite motif-containing 3b [Source:RefSeq peptide;Acc:NP_001073637]
Human Orthologue:
TRIM3
Human Description:
tripartite motif-containing 3 [Source:HGNC Symbol;Acc:10064]
Mouse Orthologue:
Trim3
Mouse Description:
tripartite motif-containing 3 Gene [Source:MGI Symbol;Acc:MGI:1860040]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa6173 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa15924 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa6173
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000008134 Essential Splice Site 45 748 2 12
ENSDART00000109183 Essential Splice Site 49 772 1 12
ENSDART00000136472 Essential Splice Site 49 752 2 12

The following transcripts of ENSDARG00000005397 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 10 (position 26790145)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 26194002
GRCz11 10 26155715
KASP Assay ID:
554-4398.1 (used for ordering genotyping assays)
KASP Sequence:
CACTACCACAATCCCAAAGTCCTGCCCTGCCTGCACACCTTCTGCGAAAG[G/T]TCTGTATCTGTTGCCACTTTGATTGATAATTAAARAGGGAAKGAGGAATT
Long Flanking Sequence:
ATGAAAACACTGATGCATAGTTTGATCTCTGTAGAACTTGGAGCAATCCTCCGGTCCAGCTTTGTCTTATTAATAGTTTTTTTTGTGTATAGATGTCTGTGACATTAGTTTTCACTGTGCTGATGGTTTATTTGCATCCTATTTGTTGTTCTGTTAGCGTAAGTAAATTTTTTTTTTGCAGTAATCTCACAGTTTGAATTTTGTCTGGTTCAATTCACCACTGTCATTTTACTCTTCCAACCCAAATCTTACTTGCCGCTGGTGTGTTTTTTTTATCAAATAAATGTTTTTGTTAACTCATCATTTTGTTCTTTTTAGGTTAAGGTTTGTCCTGGCCCTCGGCCACGTCTTTGGATGTCTGTCACAATGGCAAAGTTTGAGACCGGCCGCACAAGCCCAGTGGTCCGTCAGATAGACAAGCAGTTCCTGGTGTGCAGTATCTGTCTGGACCACTACCACAATCCCAAAGTCCTGCCCTGCCTGCACACCTTCTGCGAAAG[G/T]TCTGTATCTGTTGCCACTTTGATTGATAATTAAAGAGGGAATGAGGAATTATAGGAAGAAGATTCAGTAATGAGTCTCAATTGAACTCGTATACTTAGTGGCATTAAGCCTATTAAAATGAGTAATAAGGATCTTGTAATAGCGCCCTCAGTAATTGAAGCATGAATCGGCAGTTATCCTTTTTATAAGATGGCATATGAACTTTGAATACTTGCTTCTGACAGAATTTGGCACGGATGGGGACTCTGCACCTAGAACAGTTTTGACATGAGATGTGCGCAGTTTGACAATGAGACTCTCTCTGTTTGTTTTGGGCTTTGTATGTCAGTGGATGCTTTCCACTGTGATTGTCCGTGTTGTGACTGAAATTTCAGCAGCATTTGCCCTTCTTTTACTTTTGCTGTGTCTAACAGGAGGATCTAATTTATGAAATGAGACCTACTACTATAAGGATGTTTGGATTTGGTCTAAAAACAAAAAAGAAATTAAAACATTTTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15924
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000008134 Nonsense 263 748 6 12
ENSDART00000109183 Nonsense 267 772 5 12
ENSDART00000136472 Nonsense 267 752 6 12

The following transcripts of ENSDARG00000005397 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 10 (position 26778734)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 26182591
GRCz11 10 26144304
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCAGGGAAARGAGCACATCCAGAGCAGCTGCAGTTTCACCGAACAGGCAT[T/A]GAGCCACGGCAGCGCTACTGAAGTCCTGCTGGTYCAGAAGCAGATGAGYG
Long Flanking Sequence:
AATATCTGTGGGTATAAGTTATAAGTGCAATTATAGAAGACTATAATATTTACAGATGGATGTACTATGAGCATAACATACAAGTCATATTAACAAGAATCATTGGTTTACAAATAGATGAACATACTGTACAGGTTGCCATTAATGATCAGGGATATGCAATTCAGTATGAACATAATATACATGTTGTTATTTGCTATAAACAGGAATTACAAATAGACATGTAGATATGTATATCATACATTTACGAATGTATAAGTGCTGTGGATATGTGCACTTACAAACTCTTTGAACTATACATGAAGATGATTTTGTTGAAAATTAGTCTTAAAAAAACGGTCTGAAAATGTGATTAATTTTTCAAGATAACTAATATGAAAGAAAAAGAAAAGGAAATTATCTTCTACCCTGTCTTCCGCAGGTTCTTCAGGCGCAGTTATCGTCACTCCTGCAGGGAAAGGAGCACATCCAGAGCAGCTGCAGTTTCACCGAACAGGCAT[T/A]GAGCCACGGCAGCGCTACTGAAGTCCTGCTGGTCCAGAAGCAGATGAGCGAGCGGGTGAGTGCTCTCGCCTGCCATGACTTCCCAGAACGCCCACATGAAAATGCCCACCTGGACTGCCAGATTGAGACTGAGGGCCTGCGACGCTCCATACAGAACCTGGGCGTCCTGCTGACAACGGGGGCTGTGGGACATACGAGCGTGGCCACCGGAGAGGGACTCAGACACGCTCTGGTCGGCCAGCATGTGACTGTGACCGTCACCACTAAAGATAAAGACAGCGAGCTCGTCAGGACGGGTAATGCGGCTCTCCGAGCAGAGATCATGGGGCAGGATGGAGCGCAAGTGACTGAGGCGGAGGTGGTGGATAATAAGAACGGGACGTACGAGGTTGGTTATACACTGAAGGGTGAAGGCGAGTACTTGTTCTCTCTGATACTGTATGGACAGCCGGTGAGGGGCAGCCCGTTCAAATTAAGGGCCATAAAGCCATCGGATGTGC
Associated Phenotype:
Not determined