Busch Lab

ZMP

ncapd2

Ensembl ID:
ENSDARG00000005058
ZFIN ID:
ZDB-GENE-050506-59
Description:
condensin complex subunit 1 [Source:RefSeq peptide;Acc:NP_001155974]
Human Orthologue:
NCAPD2
Human Description:
non-SMC condensin I complex, subunit D2 [Source:HGNC Symbol;Acc:24305]
Mouse Orthologue:
Ncapd2
Mouse Description:
non-SMC condensin I complex, subunit D2 Gene [Source:MGI Symbol;Acc:MGI:1915548]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa12163 Essential Splice Site Available for shipment Available now
sa19860 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa12163
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000027088 None None 507 None 14
ENSDART00000098126 Essential Splice Site 553 1389 13 33
ENSDART00000113351 Essential Splice Site 530 1380 13 32

The following transcripts of ENSDARG00000005058 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 44830325)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 44915826
GRCz11 2 44768824
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGACWCYGCTGTCCAAATCGCTCAGTTTCTCMGAGAAAGCAAATACAAG[T/G]AMATGTCCATTAATTAACACKGATTCTCTTATCCCCTAATACTGGACACA
Long Flanking Sequence:
TTACAATTTAAAGTCTATTTTAATAAGCTGTTGTTTTAATTTCAAAACTTCACAATGATTGTCTCTGATTATACTGGCTAGTTTACTTACCCAGAAGTCAATTGAATCTGCTTTTGTTTTCTCAATGTTAAGCTGAGCAGTGTAGACCTGAAGAAACCCCTGGAAAAAGAGATGGCCAAATTAAAAGAGATGCGAGACGCTCAAGCAGAGCAAGTGCCTGGTATGCTGCTTTTGAAATTAATTATGCCTGATTCCATCAGTGATTTCTCAGTGTTCATCTGTATAATTTAAGCTTTGTATTTGTAGTTGCAGTCATAACAGCAACTGACCTGTGGGATGCGATGAAGCCTGAGGTGGAGCTGACTGTGAAGGCACTTCTGGAACCTGGCAGTGAGGAAGAGGATGATGAAGAGGAAGAAGAAGAAGCTGCAGAGGGAGATAGAAGTGACAGAGACACTGCTGTCCAAATCGCTCAGTTTCTCCGAGAAAGCAAATACAAG[T/G]AAATGTCCATTAATTAACACGGATTCTCTTATCCCCTAATACTGGACACAGGCATTTCATGTATGGTGTTTATTCCTCTGCAGGAAGGCAGTGGGTCTATGCATGCGAGCTCATTCACTGTTTCCAGAGTCCTCATTCTTTTCAGATTTGGCTGATTTAAATGCAGAATCCCTCATCAACACACTTGCAACACTTTTTAAAGGTATGCATGTCATTTTAAGAAGTTTTTTTTATTAAGCTATTTAAAGTCTTACTCGGGACAGAAAACTGTTCAGGGTCTCACCAGCCTAAATCAGGGTTCCTTGTTCAAATTATATGCGAGACATCCTTCTGTGACTCCTCTTAGGCCCAGAAGAGGAGACGCCTGAAGCAGTGTCCACTGATGCTCCTCCCACACCACAGAAGGAGAGTGAAGGCAGAGAGAGTGAACTGAAGAAGCAAGAGATGTTGGTTCAGTACTTGAAAGATACAGAGTGCTTTGCTCTTCAAGTGGAAAGAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19860
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000027088 None None 507 None 14
ENSDART00000098126 Nonsense 1269 1389 30 33
ENSDART00000113351 Nonsense 1260 1380 29 32

The following transcripts of ENSDARG00000005058 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 44815249)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 44900750
GRCz11 2 44753748
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGAGCCTGGAGTCTATCAGCCCCTGCTGTCCATCGCTGCCAAACTCCGT[C/T]GAAGAGCCAAACCACAGTTTAAGGCATGTTATGAGCATTAATGAAGCTTA
Long Flanking Sequence:
CAAAACATCATTGAAATGACCATATGCGTGAGTTAGGGGGATGAAGCTGAGTTCAGCAATCTCAGATGCAAATGCAGCAGGAACTGGTTTTTCCCGCATTCCCCCCTGGTGGGTTGTGAAGTCACCAGTCTCTGTTTTCAGCTCATGTTTTGAATTGTCAAAGATATCAGAATATTTGCAATATTTCAATTCTTACACAGGCACTACACACCTACTCCACGAGTTTGGAAATACTGTGCGCACATGCTGTTTTTCACAAAATGCATAGGGAAATGTGCAGCAAATCTGTTCTGGATGAGGATGATCGCTCATGTGTATCCTGTCTTTTTCCTCTCTGCAGGACGGAGCGACAGTGGGCCGATCTAGCCGTGTCTTTGTCACTGCTGTCTGTGTGCGAGAGAGGTTTTAAGAAGCTGCAGGAGTGCTGGGACTGTTACAGTGATAAACTAGCTGAGCCTGGAGTCTATCAGCCCCTGCTGTCCATCGCTGCCAAACTCCGT[C/T]GAAGAGCCAAACCACAGTTTAAGGCATGTTATGAGCATTAATGAAGCTTATTTACTGTATACTGAGCCATTCTGAGACGCCAAAATCACTGATGTTTTTATGTGAGCAGCTCATTAAATGCCGTGTGCTGTGTATTCATACATAATTATAATATAGTCTTCGATAGGAGTGTACGAATAACAATCCGTGGTTCGGAACCCACATGCCCGCAGATTAAGAACTTTTTTTTTTTTTTTACTTATAGATTAATCCTAAATTTGTAATGATTGCTTTGATTTGCTGCATTCAAATCTGTTAGGTAGAGAGAGATCCAGTTTTTACACTTCAGTTATTTAATTGTTTGCAACAAACTGAAGTACTTGATAACAGTTTCCAGTTCAGATACTGTGATTACTGCTCCAAAATGTGTTTATTTCCCCCTTTGAACGCACAATATTATATTTTGAGAAGCTTTTAAAAATTTTGGAGCAGTAAACGTGAGGCTGAATAATTAAAATGAA
Associated Phenotype:
Not determined