Busch Lab

ZMP

irf2bp2a

Ensembl ID:
ENSDARG00000004702
ZFIN ID:
ZDB-GENE-030131-7809
Description:
Interferon regulatory factor 2-binding protein 2-A [Source:UniProtKB/Swiss-Prot;Acc:Q6NZT6]
Human Orthologue:
IRF2BP2
Human Description:
interferon regulatory factor 2 binding protein 2 [Source:HGNC Symbol;Acc:21729]
Mouse Orthologue:
Irf2bp2
Mouse Description:
interferon regulatory factor 2 binding protein 2 Gene [Source:MGI Symbol;Acc:MGI:2443921]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa35596 Nonsense Mutation detected in F1 DNA Not yet available
sa950 Nonsense F2 line generated Not yet available

Mutation Details

Allele Name:
sa35596
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000025126 Nonsense 74 491 1 2
ENSDART00000136991 Nonsense 74 263 1 2
Genomic Location (Zv9):
Chromosome 13 (position 50422490)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 49153528
GRCz11 13 49444206
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAAAAGAGCGCATGGATTTCAGGACGGCAGACCGGCGGGGCCGGGGAAA[C/T]AGTTACCGGGGAAGGAGATCCACGCGTCGGGAGACCCGGGCTCGCGCCCG
Long Flanking Sequence:
ACAGCGCATGCGCCGCAGGGGCTGTTCTGTCGAAGAATCAAGTAAATAGACGCGGAGCGGCGGTGACGTCACTGCTCCACATTGAGCTCCAGCCTGGCCGCGGTAGTAGTGAGTGAGAGAGACCGAGCGCGCGTCGTAGTAAAGCACGCTACTATGAAGTTCTGTTTGTAACTTAATTATTACTTGCGCCACCGCGACAGGAACCTACCTTGTTTTTCCCCAGCATCATTCCACACAGGATTGTGCCGTATTTCGGAGGGGTTTTCGCCCGAGAGAGAGCGATGTCGTCCGCGGCGGTTGCTGCTTCGAGGAGGCAGTCGTGTTATTTATGTGACTTGCCCCGCATGCCGTGGGCTATGATCTGGGATTTTACCGAGCCCGTTTGCAGAGGATGTGTCAACTACGAAGGAGCCGACAGGATCGAGTTTGTCATTGAAACAGCCCGGCAGCTCAAAAGAGCGCATGGATTTCAGGACGGCAGACCGGCGGGGCCGGGGAAA[C/T]AGTTACCGGGGAAGGAGATCCACGCGTCGGGAGACCCGGGCTCGCGCCCGCCGCAGCCGCTGGATCGCTACCCGCTCTCCTCAGAGCGTCCGCCCAGATTGGGAGCCGAGTATCAGTCTGCGAGACAGGCGAACGGCATCCCAGTGCCTAACGGATTCTCAAAACCCGACGATCCTCCGGAGCTCAACCGCCAGAGCCCGAACCCGCGCAGGACTAGCGGCGTGCCGCCCAATTTAGTGCCTTTAGTGAACGGCAGCATGGCGCACGCGATGAACGGCAGACCGGGGCAGATGTCAGATCTCGGAGGGAATAAGCGACCGGCGTCGGTCTCCAGCACAGAGCACGACAAGGACAAGCACAGACCGGACAGCCTGACGCCGGAGATCAGCGACGGCCACAAGACGCGCGCCGACGACTGGCTCAACAAGAACAAAACCGTGCGGGAGCTGATGACGCTCAACCCGTACGACGGCAGATTCAAGAAGGAGCACATGCAGCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa950
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000025126 Nonsense 240 491 1 2
ENSDART00000136991 Nonsense 240 263 1 2
Genomic Location (Zv9):
Chromosome 13 (position 50421992)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 49153030
GRCz11 13 49443708
KASP Assay ID:
554-0855.1 (used for ordering genotyping assays)
KASP Sequence:
TGATGACGCTCAACCCGTACGACGGCAGATTCAAGAAGGAGCACATGCAG[C/T]AGAGGGTCATGTACGAGACTGGTCCTGCATCCAAATCAGGTATGCTATTA
Long Flanking Sequence:
AACAGTTACCGGGGAAGGAGATCCACGCGTCGGGAGACCCGGGCTCGCGCCCGCCGCAGCCGCTGGATCGCTACCCGCTCTCCTCAGAGCGTCCGCCCAGATTGGGAGCCGAGTATCAGTCTGCGAGACAGGCGAACGGCATCCCAGTGCCTAACGGATTCTCAAAACCCGACGATCCTCCGGAGCTCAACCGCCAGAGCCCGAACCCGCGCAGGACTAGCGGCGTGCCGCCCAATTTAGTGCCTTTAGTGAACGGCAGCATGGCGCACGCGATGAACGGCAGACCGGGGCAGATGTCAGATCTCGGAGGGAATAAGCGACCGGCGTCGGTCTCCAGCACAGAGCACGACAAGGACAAGCACAGACCGGACAGCCTGACGCCGGAGATCAGCGACGGCCACAAGACGCGCGCCGACGACTGGCTCAACAAGAACAAAACCGTGCGGGAGCTGATGACGCTCAACCCGTACGACGGCAGATTCAAGAAGGAGCACATGCAG[C/T]AGAGGGTCATGTACGAGACTGGTCCTGCATCCAAATCAGGTATGCTATTATTTGTGTTCAGGCGTGCTGCATTTATTTGTTTTTAAAGCTGGATAGACGTAGAAAGGATCAATAACAGTGGCTATTTAGTGTACAACCTAGGTGTGTGTTCTTTATTTCAAGCTGGATGGACTGGAGATTAAAGCAGATCTGATTAACTTGTGTGTGTTTATTCACACATGCAGTGCAGTGCTAGCTTTGAATGAGAGCTCTATGGCATGAGTCAGCTGCGAGAGCAGAAAATTTCTGCTGATCAAAGCTCAACGTGTGTTTGCATGTGGTGCATTTGCAGGCAGCCTCATTGTTGCGTCTGGCACTACAATGCATCACTGCGTCTGCCACATTGTTATTGCATAAAGGCGGCTTTGTGCAGCTCATTCATGCAAGCTCCTGCTCTCTCTTTTTTGCAGATCGAGGCAAACATCCCAAGAATCTGAAGAGAAAAGCTTCTCCGGAGCCGG
Associated Phenotype:
Not determined