Busch Lab

ZMP

si:ch211-284e20.6

Ensembl ID:
ENSDARG00000004502
ZFIN ID:
ZDB-GENE-050208-371
Description:
REST corepressor 3 [Source:RefSeq peptide;Acc:NP_001038494]
Human Orthologue:
RCOR3
Human Description:
REST corepressor 3 [Source:HGNC Symbol;Acc:25594]
Mouse Orthologue:
Rcor3
Mouse Description:
REST corepressor 3 Gene [Source:MGI Symbol;Acc:MGI:2441920]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa29845 Nonsense Mutation detected in F1 DNA Not yet available
sa25185 Splice Site, Nonsense Mutation detected in F1 DNA Not yet available
sa6146 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa29845
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000104498 Nonsense 172 551 6 14
ENSDART00000143792 Nonsense 172 547 6 12
Genomic Location (Zv9):
Chromosome 22 (position 41243219)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 38330858
GRCz11 22 38284005
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTTGTAGTTGCCGGACAAATCCATATCCAGTCTTGTAAAGTACTACTA[T/G]TCATGGAAGAAAACACGCTCCAGGACCAGCCTGATGGACCGGCAAGCAAG
Long Flanking Sequence:
CTCAGGCATGCTCGTGTCTGGATCCACAAGTATCGCTTTAACAGCCAAGAGGAGCGGAAAAGTCACCTCACAAACAGGCCAGCGGGTCAAATGTCCAAAGGGAGAGAGGTAAAGATGGAGTTTTACAGCATTTCTCCATAGTAGTGTAATAGCGGCTCGTGTGCTGAGCCTTCTTCAGTGTCAATGAAAACTGTCCAGCAAACTCACAAGCAGTTGAACTGTGCATAGTTATCTACCTTTTAAGTAGTAGGAGCGTTTTATTTACTCCCCCTTGCCTCCTTCGCCATAGTATTCTACTGTGACATTGTGCATAGGAGATAAATGACATCACTACGTAATAACCACTTATGATCTATCTATTACTGAACCCATATCGAATTTTCTCCATCTGTATCGCGGTCCACTAAAGATTATTATTTTTTTTATTGGTCAATTGAATTTTTTTTTTTTTTTTTGTAGTTGCCGGACAAATCCATATCCAGTCTTGTAAAGTACTACTA[T/G]TCATGGAAGAAAACACGCTCCAGGACCAGCCTGATGGACCGGCAAGCAAGAAAGCTGGCTAACCGCAACAATCAAGACGAAAGGTGCAGTTTTGACCATATTTGCGCTCTTGTTACAAGTACGTCTGTCACTGTAATCAGTATATGTGTTCACGGTGCAATACTAGGAGATGACCCTGATCATTATTTGGCTTTGCAATATATATTTACAAATTCACAAATAGCGTTAAAGCAATTTTGCAATGACATTTACATTCTACCTCACTCATGTCAAAGATTAGAATTGGACATTTACCTGGTGGGACATGTAATAGTATGTATAATAGGACATTGTGGCTCAGTGGTTGGTACTTTGCCTTCACAGCAAGACGGTCACTGATTCAAGTCCTAACTGGGTCAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCCATGTTGGCATGAGTTTCCTCCGGGTGCTCCGGTTTCCCCAACCGTCCAAACACATGTGCTATAGGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa25185
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000104498 Splice Site, Nonsense 201 551 7 14
ENSDART00000143792 Splice Site, Nonsense 201 547 7 12
Genomic Location (Zv9):
Chromosome 22 (position 41244429)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 38332068
GRCz11 22 38285215
KASP Assay ID:
554-7396.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGTGTAGTGTTCCTGGTGCTCACTGTGTGTGTATTTCTGTGATATTAGT[G/T]AGGAGGAGATGGAAGAGGCTAACCCTGTGGAGGCCAACGACAGCGACTAT
Long Flanking Sequence:
TAATCAAATTAGCTCAAGATGACAATCATATCGCTTATTGCAACCATTTCTGTGACAATATAATCACACAGCAAAACTTCTTTATCATGATTGGTCTAATAACAAGTGCACTTAAAGGTTTATACAACAAGTTTTAGGAACAAGTAATAACTGGACTTCTAGTTGATGATTTGGTGTCAGAAGTGTCTAAGAAGAAGTGGCAGATCTCTCGCACGCCCCTATACTGAATGAACCCCAAACCATGACTTCTCCTTCACCAAACTTGACTGATTTCTATGTGAATCTTGCTCCATGCTAGTTCCAGTAGGTCTTCTGCAGTATTGGTGATGATTGGGATGCAGATCAACAGATGATCCATCAGAGAAATCCACCTTCTGACACTTTCACACGTGATCAACTAGAAGTCGAGTTACTATGTGTTGCTCTGTCCACCACAAGACTATTGTCAGGCAGTGTAGTGTTCCTGGTGCTCACTGTGTGTGTATTTCTGTGATATTAGT[G/T]AGGAGGAGATGGAAGAGGCTAACCCTGTGGAGGCCAACGACAGCGACTATGACCCAACAAAAGAGGCAAAGAAGGAGGTAAACGTGAGTTCATTACACACACATACATCCAGAGCTGTGTTGGGGAATGTGCCAAATTGCTAAATACATTTACATTTAGTCATTTAGCAGACGCTGTTATACAAAGCGACTTACAAATGAGGACAAGGAAGCAATTTACACAACTATAAGAGCAACAATGAATAAGTGCTGTAGGCAAGTTTCAGGTGTGTAAAGTGTAAGAAGCAAAACATTAGTAATTTATTTATTTATTTTTTTGTAGTACAGTTAGCGGTGGAGCCAAAGAGGCAACTACAGATTAGGAAGTGTAGTGGAGACTAAATAGTTGAGTTTTTAGTGGTTTCTTGAAGACAGCGAGTGACTCTGCCGTTCTGATGCAGTTAGGGAGTTCATTCCACCAACTGGGCAGATTGAACGCGAGAGTTCGGGAAAGTGATTTCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6146
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000104498 Essential Splice Site 228 551 7 14
ENSDART00000143792 Essential Splice Site 228 547 7 12
Genomic Location (Zv9):
Chromosome 22 (position 41244513)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 38332152
GRCz11 22 38285299
KASP Assay ID:
554-3768.1 (used for ordering genotyping assays)
KASP Sequence:
CCAACGACAGCGACTATGACCCAACAAAAGAGGCAAAGAAGGAGGTAAAC[G/A]TGAGTTMATTACACACACATNACATCCAGAGCTGTGTTGGGGAATGTGCCA
Long Flanking Sequence:
TCATGATTGGTCTAATAACAAGTGCACTTAAAGGTTTATACAACAAGTTTTAGGAACAAGTAATAACTGGACTTCTAGTTGATGATTTGGTGTCAGAAGTGTCTAAGAAGAAGTGGCAGATCTCTCGCACGCCCCTATACTGAATGAACCCCAAACCATGACTTCTCCTTCACCAAACTTGACTGATTTCTATGTGAATCTTGCTCCATGCTAGTTCCAGTAGGTCTTCTGCAGTATTGGTGATGATTGGGATGCAGATCAACAGATGATCCATCAGAGAAATCCACCTTCTGACACTTTCACACGTGATCAACTAGAAGTCGAGTTACTATGTGTTGCTCTGTCCACCACAAGACTATTGTCAGGCAGTGTAGTGTTCCTGGTGCTCACTGTGTGTGTATTTCTGTGATATTAGTGAGGAGGAGATGGAAGAGGCTAACCCTGTGGAGGCCAACGACAGCGACTATGACCCAACAAAAGAGGCAAAGAAGGAGGTAAAC[G/A]TGAGTTCATTACACACACATACATCCAGAGCTGTGTTGGGGAATGTGCCAAATTGCTAAATACATTTACATTTAGTCATTTAGCAGACGCTGTTATACAAAGCGACTTACAAATGAGGACAAGGAAGCAATTTACACAACTATAAGAGCAACAATGAATAAGTGCTGTAGGCAAGTTTCAGGTGTGTAAAGTGTAAGAAGCAAAACATTAGTAATTTATTTATTTATTTTTTTGTAGTACAGTTAGCGGTGGAGCCAAAGAGGCAACTACAGATTAGGAAGTGTAGTGGAGACTAAATAGTTGAGTTTTTAGTGGTTTCTTGAAGACAGCGAGTGACTCTGCCGTTCTGATGCAGTTAGGGAGTTCATTCCACCAACTGGGCAGATTGAACGCGAGAGTTCGGGAAAGTGATTTCTTCCCTCTTTGGGATGGAACCACGAGGTGACGTTCATTCACAGAACGCAAGTTTCTGGAGGGCACATACATCTGCAGAAGTGAGA
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa7994
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
T > A
Consequence:
Essential Splice Site, Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000104498 Essential Splice Site 459 551 None 14
ENSDART00000143792 Missense 437 547 12 12
Genomic Location (Zv9):
Chromosome 22 (position 41252961)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 38340600
GRCz11 22 38293747
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCACGNNNTCTTCNTCNNTGTGTTAGGGTCAGGTGAGTCTGGCGTGTGGGCCR[T/A]CTCCTGTCGTCTCCTCTNNNTCCTCCTCGTGTCCTCCATCSTCCTCSTYGTCT
Long Flanking Sequence:
TGTCGAAAAAGTGGCACGGTATGGTTCGGTACGCCTTTTGACAGTGGAAACAGCCATAAAAGCGTACGGTAACGTACCACTCCATATGAGGTGCCGAACTCTGCTGGCATCAGTGCATGACAGAGGCAGAGTACGTTCACTCCGCTCCACACTCAGCTTAAGTTTTTTTAATAATCAAACATCTCTGCTTGCGCAACACAACAAAACTATTTTGAAATTTGCTGCCAACGGTTTTAGTAATCGATTTTAATCGATTTAAGTGACGTGTTGATGCAGCCCTAGTCAAGATTACTGATGTTTAAAGAAATCAGATCTTAAACCTCACTAGAAGTGCCTGTGCTGCTGACTGAATATTAAAGTCCTTCTGCGTGTTCCTCATCACCAAGATTTAAAATGATTAGTGATTTTCAAAAGTCTTTCCCGAACCCTGTTACTTCCTAAAAGCTGAACGGCACGTCTTCTCTGTGTGTTAGGGTCAGGTGAGTCTGGCGTGTGGGCCG[T/A]CTCCTGTCGTCTCCTCTTCCTCCTCGTGTCCTCCATCCTCCTCCTCGTCTCTCCAGCAGCCTCCGCCTCTGCTGCGCCCGTCTCTTCCGGCCACCCCGGCTCTGCATCGCCAGCCTCCACCTCTGCAGCAGCAGGCCCGCTTCCTGCAGCCCCGTCCCGCTCTGCACCAGCCCCCGCCGCTCATCCGACCCTCCAACCCCGTCCCACCACGGCTCAACCCCCGGCCGGCCGCTCCACTGGCCCCCAGCACAGCGAACACCCCTGCAGCAGGACAGCAGCCGCCAGCTCTGCTGGGCATCCAGAGCGCAGAGACGCCCTCGTCCTCCCTGCACTGACACACCGCCGGAGGGTAACACTGTACAGACCCCCAAAACTGAACCACACACACCTTTACACTGTACATATTAGTAGCGTGACTGTCTATTTATTTAATCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT
Associated Phenotype:
Not determined