ZMP

rdbp

Ensembl ID:

ENSDARG00000004343

ZFIN ID:

ZDB-GENE-040718-69

Description:

negative elongation factor E [Source:RefSeq peptide;Acc:NP_001002375]

Human Orthologue:

RDBP

Human Description:

RD RNA binding protein [Source:HGNC Symbol;Acc:13974]

Mouse Orthologue:

Rdbp

Mouse Description:

RD RNA-binding protein Gene [Source:MGI Symbol;Acc:MGI:102744]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa13558	Essential Splice Site	Available for shipment	Available now
sa29220	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa13558

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000113250	Essential Splice Site	57	378	2	11

Genomic Location (Zv9):

Chromosome 19 (position 27409249)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	27339361
GRCz11	19	26923584

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CAGAAGAYGAAGAAGCGCTGCAAAARAAGTATGCTAAACTGAAGAAAAAG[G/A]TAAAGACGATWGTTACTTTTCTCANNNNATATWTACAYGYACTTTCTAAT

Long Flanking Sequence:

GGCAGTCCTACAGGAAGCTGCGCAGAAGTAATGGGACGGAAGTATATGCATTTTATTTTATTTTGTGCTTTATAATTTAACGATCTACGTGTGTGATCTAAATCACACTAAAGTATTGGTGCACTTTAAATAATAGATACTTTAAAATTATCTCAGTATGGACAAACGATTAATTTGACCTCCTTTCTCGGATGACAACAGATTACGTCATATTTACGCGCCAGGTGAGGATTTACTGCAGACGCTCATCGCATAAAATTTATTCTTTGAATTTAGGGTAAATGCGTGTATTTTGCTGTATGTTATGCAACTTACGATTAAATATATATGTTTGTGAAAAACACGATGCTATCTTGAGACTGAAAACAAAATACTTATGCTTGCTAAACATATTGCTGTTGTTTTTCTCCTTAAGGTCCAGCAAAATGGCAATATTTCCCAGTTCATTAACAGAAGACGAAGAAGCGCTGCAAAAGAAGTATGCTAAACTGAAGAAAAAG[G/A]TAAAGACGATTGTTACTTTTCTCAATATATATATACATGTACTTTCTAATCTTTAATATGTACTCGAAATCAAAATACAATTAGTTAAGTTAATTAAGTGCCTGCTCTACCAAATGGTTGACCATATTTTGATGTTTGATGTTTTGAATAATGGTTTAAACACACAGCATTGTTGGTTTACAAAAAAATAAAAAATAAAATAATAATTCAAGCAGGAATAATCCTGTTGCACTACTACACTTGATTTTGGTTTTGTTGTTAAACAAACAAATAAATAAGAAAGCGTGTTAAATCAGAATCTAAAATATTTTATGGCATACTTCAAAAATTTAAGATTATTTGGTATTCAAAAATGTTTTATTTTCGTTTCGTTATATCATGTTTTTAAATAAATTAGACTTGCACTTCATTTTTCAGATTTTTCATAGTATATGTATTAATTTAGGGACTTTTACCATAAACCGACATATCAACCATTTGGTAGAAGTTGATATTTTGGA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa29220

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000113250	Nonsense	234	378	7	11

Genomic Location (Zv9):

Chromosome 19 (position 27414028)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	27344140
GRCz11	19	26928363

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AACGGGACCGGGAACGGGAACGAGACAGGAGCCGGGATGGAGAAAGAGAT[C/T]GAGAGAGGGACCGGGATCGAGACAGAGAACGAGACAGAGAGAGAGATGGA

Long Flanking Sequence:

CAGTTTGTTATGGTCTTGTTGAGCTTGTTTCCAAAACATAAAAAAATATTATATACATGTATATGTATGCAAATATGTCTACATATGTGCTAAACTAAATATCAATGAAGAAGTCTTTGAAAATATTGAATGGATGTAGTGTCTGTAGACTTGACATGTTTCTCTCTTTGTAGTCCGCTAAACGAATCCACAGGAAATCCCTTTACGAGAGGTGAGACTTAAAATAATACTAATAATTAAACATCTTTATTAAAACAGTGTTGTGGTCAATATTAAAGCTGTTTTTTTAATGATCTCATAGTTTTGTTCCTGGAGATCGATCTCGTGATGAAGAGGCAGGAATGCCAAGTCGAGATTCTGAGCGTGACCGGGAAAGGGAGATGGACTGGGAGAGAGATCGAGAAAGAGACAGAGACAGAGAAAGGGACCGTGAAAGAGGTCGAGAGAGAGAACGGGACCGGGAACGGGAACGAGACAGGAGCCGGGATGGAGAAAGAGAT[C/T]GAGAGAGGGACCGGGATCGAGACAGAGAACGAGACAGAGAGAGAGATGGACCCTACAGACGTAAGGCAATCTGCGCAATTACAAATGTTCATTCAAAATAATATTAACCCATTCAGTGTTCATATTGTGTCTTTACAATAATAGTAAACCGTAAATCATGCATTTGGCTTTTTTTAAACTTGTTCTGTTGAAAATCTGTTCAGGGTCAGACTCGTATCCAGAGCGCAGAGGTGTGCGCAAAGGAAACACAGTGTATGTGTACGGCACCGGTTTAGTGGAGGACAGCTTGCGCACAGCCTTTGCTCAGCACGGCAACATCATTGACCTTTCAATGGACTCTCCACGCAAGTAAGATTATTTTCTTAAAATGCTGGGCATCTGGAAAGAGACAAACTGATTTCTTAACTGTCTATAGTAAAGTTTAGAAGATTGATTGGTTATGAGTTCCGTTGTAGTCTAAGCATTAGGAAAGTTATTAGAAGTTGAAATGGGGTCATTTT

Associated Phenotype:

Not determined