ZMP
atl3
Ensembl ID:
ZFIN ID:
Description:
atlastin-3 [Source:RefSeq peptide;Acc:NP_001006016]
Human Orthologue:
ATL3
Human Description:
atlastin GTPase 3 [Source:HGNC Symbol;Acc:24526]
Mouse Orthologue:
Atl3
Mouse Description:
atlastin GTPase 3 Gene [Source:MGI Symbol;Acc:MGI:1924270]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa35709 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa42408 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa35709
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000023054 | Nonsense | 98 | 513 | 3 | 14 |
| ENSDART00000139552 | Nonsense | 98 | 165 | 3 | 5 |
| ENSDART00000139975 | Nonsense | 98 | 165 | 3 | 5 |
| ENSDART00000144921 | Nonsense | 98 | 114 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 14 (position 31646380)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 30436437 |
| GRCz11 | 14 | 30776751 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGACCGGTTTCTCCTGGAGAGGAGGATCAGAACCAGAGACCACTGGCATC[C/T]AGCTATGGAGTGAAGTTTTTGTTGTGCGAAAGAAGGATGGAAGTGAGGTA
Long Flanking Sequence:
GTGTAAGCTTATTTAATTGCTGAAACATTTTTATTGTCGCCCACAGTAAGCGTGTGACATCGGACAGAGGATGAGGAGTGAACCTGGGCCAGTTCAGATTGTGACAGTCAACAAGGAGAAGCACTCCTTTGACCTGGACACAGAAGCGCTCAGTCGGATTCTCTTGGTGCCTGAAGTTCGAGATAAGCATGTGGTGGTGGTGTCTGTCGCTGGTGCTTTCCGAAAGGGAAAAAGCTTCCTTTTGGACTTCTTGCTCCGATACATGTATAGGAAGGTCAGAAGGAAAAACAATGCATTCAATGTTCAGATCATTGCAACACATGCTTTAATAAAAAGAGAAATGTGTACAAATCCTATATTTCAGGATGTCAGATTAAATTTATCAACCTGGCCTTTTTTTTTGTGTCCATCAGCCTGGTCAGGACTGGCTTGGGCAGGACAATGATCCGCTGACCGGTTTCTCCTGGAGAGGAGGATCAGAACCAGAGACCACTGGCATC[C/T]AGCTATGGAGTGAAGTTTTTGTTGTGCGAAAGAAGGATGGAAGTGAGGTAACAAACACCCACCAGAAGGCAGCTTAATAAATCACGTGCTCTTACTCATAATTGGGTTAAAGGTTTTACTGCCAGAAATGTTAAGTATTTTTCAGCTTTTACTCCACTCTGAACTGTACATATAGTACGGAAGGTGTTCCGAACAAGAAGTCTTAAAAGGGATAGTTCACCCCAAAATATTTCCTCTATAATTGCTCACATTGTGTATAAATTATTGCTCACATTGCAAGTGGATATACACTTTAATGAATATCTTTCTTTTGTTGAAAACAAAACAAGATAGTCTGAAAGATTTTTGAAAACAACCATCGACTATTACAGTAGGAACAAAAAATATTGGTGGAAACCAGTTCTTCATTATATCTTCCTTTAGTGTTCAACAGAAGAAACTCAAACAGGTTTAAAACAAGTGGAGAGCAAGTAAATGACTTAAATTTAAATCTTTTAAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42408
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000023054 | Essential Splice Site | 165 | 513 | None | 14 |
| ENSDART00000139552 | None | 165 | 165 | None | 5 |
| ENSDART00000139975 | None | 165 | 165 | None | 5 |
| ENSDART00000144921 | None | None | 114 | None | 3 |
Genomic Location (Zv9):
Chromosome 14 (position 31650468)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 30440525 |
| GRCz11 | 14 | 30780839 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTATAACCTGTCACAGAATATTCAGGAAGATGATCTACAGCAACTTCAGG[T/G]TAGTCAGTTCAAATCTACTCAGGAATACACCTATCTTGAAGCCCATATAT
Long Flanking Sequence:
GTCTGATATCTTATCTGGTAGTGCTTGTCGTGTAAGCAATCTGCACTTGTGCAAGTCCTGATTTCAGATTCATAGTTTCAGGTTTCTTAGGAAATTCTGTCATTTCCTCTCTGTAGTTTGCAATCTGTGATTCTGGCTTAACGTGTTTCAGGAATGATTCTCTATGTTTTACATCACTTCCAGTCACTTTCTCTCTTGTGATTTGAGAACTGCACTAAAGCAGAGCATTTTGTTCTTCTTTTTTCTAGGTTGCAGTGCTTTTAATGGACACGCAAGGAGCGTTTGATTCTCAGTCCACGGTGAAAGATTGTGCCACTATCTTTGCCCTCAGCACCATGACCAGTTCTGTCCAGGTTTCCACAACGCTCCTCTAAAATCCTGTTATAAATGAATACAGAAAAAGACTGGAAATGTGTCAGAATTATAATGGCTTCTTTTTTTTTTTTAGATTTATAACCTGTCACAGAATATTCAGGAAGATGATCTACAGCAACTTCAGG[T/G]TAGTCAGTTCAAATCTACTCAGGAATACACCTATCTTGAAGCCCATATATAATTATTTATTTATTTATTTTTCTACATTTAAAATACCAGAGCAGCATTATATTTTTAGCCAACATCCTGTGATCTTTAAATGAATATTTGCTGCAGGTTTCGCTTTTTGATAACAATAAAAAAATGTAAATGACAGCATTTAAGATGTCATCTGAAATAGCAATGTAGATGTTTTACATAAGCTCTAAGATTCAGCACTGCAGTAAAGTAGTTATGCCAGGTTTATTTTCGAATGACATTAAAAATCATACCTGTCAACATTGTGATGTGAAAATAAGGGTTCCCCCCCTCCCCCGTCAGAAAAAAAAAACTTAAGACATTCCCTAAATTACTAAAGATGTTGAAGCTGTTTCATTGTAAATAAACAGTTGAAACGGTCAGTAATGTGTTTTTTATTATTATTATTACTTACAAAGGATAGAATAAATAGTATACATTAGAAAAGCTGC
Associated Phenotype:
Not determined