ZMP

pdx1

Ensembl ID:

ENSDARG00000002779

ZFIN ID:

ZDB-GENE-990415-122

Description:

pancreas/duodenum homeobox protein 1 [Source:RefSeq peptide;Acc:NP_571518]

Human Orthologue:

PDX1

Human Description:

pancreatic and duodenal homeobox 1 [Source:HGNC Symbol;Acc:6107]

Mouse Orthologue:

Pdx1

Mouse Description:

pancreatic and duodenal homeobox 1 Gene [Source:MGI Symbol;Acc:MGI:102851]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa12	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa12

Status:

Available for shipment
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Availability:

Order Allele From ZIRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000014696	Nonsense	208	246	2	2
ENSDART00000014696	Nonsense	208	246	2	2

Genomic Location (Zv9):

Chromosome 24 (position 22294255)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	24	21541133
GRCz11	24	21686307

KASP Assay ID:

1198-0001.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGTGGAAAAAAGAGGAGGACAAGAGGAGAGCCAGGGGAGTGGATCCCGAA[C/T]AGGACTCCTCCATCACGTCCGGGGATCTTAAGGATGAATCTTGCGTCGGC

Long Flanking Sequence:

CTCAAACGCTGATTTTAAAATCAATCAGAACCTTCAATAATTTGATCAAAAGATACAAATTTCAGTTTTAAACATCTGGTTTCGGTGATAAATCTGGAATTTGCCCATAATTGGTGTAGCTCTACAAAATTAATTGAATAAGTGCTTGAGTTTAATTTTATGAAGAGATAATTTTGTGGTATCCTCAGAAATAGACTGTGTGCGATTGGGATGTCTAAAACACGACTTTACTGAAGTTTCACTCCTATAATTCTGTTTTAGGCCCTTATATGGTCGAGGCCGAGGAGAACAAGCGCACGCGCACAGCTTACACCAGAGCGCAGCTGCTCGAGCTCGAGAAAGAGTTTCTCTTCAACAAATACATCTCGCGCCCGCGCCGCGTTGAACTCGCACTCACCCTCAGCCTCACCGAGAGACACATCAAGATCTGGTTTCAGAACCGACGCATGAAGTGGAAAAAAGAGGAGGACAAGAGGAGAGCCAGGGGAGTGGATCCCGAA[C/T]AGGACTCCTCCATCACGTCCGGGGATCTTAAGGATGAATCTTGCGTCGGCACGGCAACACTTGCGGGACCCCCTTCCCCCCTGCACCCGCATGCACCTTCAGTCCAACAAGACTCTTAAACATAAGACTGTGACACGAGTTGAACTATGTATGCAACGGCAACCAGTGGCAAAAGACTGACAGCAGTTGTAAAACTCCAATATGTACAGTGCTAGCAAACAGATTGGCAAAAGGGGGCGCTCTCGATTGCCGCATTTTGGACATTGTTTGAAGGTTATGAATTTTATAGATGAAGTATGAATAAATTCTTAATTTAAAAAAAGAAATGGGTAAATACAACAACATCTCAACATTTATCATATTTATATAGTTACCACGAACATTAAAGTGATGTGAGAAGTGTGGCGTCATGTCATTTGTTTCTACATGTGCTGCTGGTCAAAAATGGCTAGAGTTTGTATTTGAATAAAATTAACATTTTAGTCCACACGTTTTTTTAT

Associated Phenotype:

Normal

Stage	Entity	Quality	Tag
Larval:Day 5 ZFS:0000037	whole organism ZFA:0001094	quality PATO:0000001	normal PATO:0000461