Busch Lab

ZMP

phf20a

Ensembl ID:
ENSDARG00000002750
ZFIN ID:
ZDB-GENE-070912-270
Description:
Novel protein similar to vertebrate PHD finger protein 20 (PHF20) [Source:UniProtKB/TrEMBL;Acc:A8HAK
Human Orthologue:
PHF20
Human Description:
PHD finger protein 20 [Source:HGNC Symbol;Acc:16098]
Mouse Orthologue:
Phf20
Mouse Description:
PHD finger protein 20 Gene [Source:MGI Symbol;Acc:MGI:2444148]

Alleles

There are 8 alleles of this gene:

Allele Name Consequence Status Availability
sa31829 Nonsense Available for shipment Available now
sa12229 Nonsense Available for shipment Available now
sa1493 Nonsense Available for shipment Available now
sa21909 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa31829
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000018743 Nonsense 103 951 3 20
ENSDART00000123263 Nonsense 103 932 4 17
ENSDART00000126488 Nonsense 103 544 4 11
ENSDART00000127817 None None 380 None 7
Genomic Location (Zv9):
Chromosome 11 (position 25982416)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 24811241
GRCz11 11 25048857
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCATGTGAATGACAGAGTTCTTGCCAGTTGGTCCGACTGTCGATTTTA[T/A]CCGGCAAAAGTTCTGGCTGTCAATAAAGATGGTAATAAAATTAAAACCAA
Long Flanking Sequence:
CCTTTTAATATTCTGATTTAGTGAATTATTTATTTATTTCATTATTATTTGGTCTAAAAAAGTATGTTTAGTTTGAAATATAAATTCTGTCATTTATAAATGACCTAACTTCTACATTTTATTATCATAATGCATCCTTCCTGAACAACAGTATTAAAGTCTTACTAACCTCAAACCTCTGAACAGTGGTGTAGAATATCACATAACCTCTCCATTGGATGTCTTTATATTCATATAAGATATGTGATTCACCAGCATGCAGAAAAATAAGATCTCTGCAGACCCTTATAAATATGTACACCCAGAGGAAACCCACATGAACACAGGAAAAACATGCAAACTCCACACAGAAATGCCAATTGACCTAGCCGGGACAGTGCTAACCACCGAGCCACCGTACCACCAAAACCCTAATTCTAATTGTTTGCCTTTGTCTTTTTTTTGCAGGGATTTCATGTGAATGACAGAGTTCTTGCCAGTTGGTCCGACTGTCGATTTTA[T/A]CCGGCAAAAGTTCTGGCTGTCAATAAAGATGGTAATAAAATTAAAACCAAAGTGTTATTAAACATTTATATGTGACTCTGGACAACAAAACCAGATTTATGTTGTACATGTATATTTTTTTGGAAAAGCCAAAAATTTTAAATTACTGATTTTTCTTTTATGACAAAAATGTTGAAATATTATGTAAAGATCAAGTTACATGGAGATTTCTTTGAGAATTTTGGACTATACGTATATCAAAACTCTTGATTTATAATGTGCTTTGCTAAGCCCTTTAATTAGAAAGAAAATGAGGGAATGTTTTCAGTATTTATTTATTTTTTAAATCAAAGATTCCATATTTTCAAATAGTTGCATCTCCGCCATATTCAACCCACGCTCATTCTGAAAATGTACCGCTATATACATTTCTGCAGTACGCCAAATACATCCCAGGAGATACTTTTTTTGCAGTTTTGTTTAAGTGAATCTACCAGAGGCCGCTGTGTATGCTTTTTGAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12229
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000018743 Nonsense 121 951 4 20
ENSDART00000123263 Nonsense 121 932 5 17
ENSDART00000126488 Nonsense 121 544 5 11
ENSDART00000127817 None None 380 None 7
Genomic Location (Zv9):
Chromosome 11 (position 25983722)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 24812547
GRCz11 11 25050163
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCAYTCTAATGACAAAATGATCYTCCAGCATCYTACACAGTAAAGTTCTA[C/A]GATGGTGTCGTCCAGACAGTCAARGGAATCCATGTGAAGCCCTTCACCAA
Long Flanking Sequence:
ATCTTACCTGCTTTCTGAAACCGTTGTTCACCGGACTCAAACCCAGATGTCGTGGTCAACTCCTCTCTGCATCTTAAGTTCACCGATGTACATGACGAGCTAACTAGACAAACTGGTTAAAGCGGGATAGCTGTCCATATGGAGGTAAGCGGTCAGCTAGTAATCGCGAAAAGGAAAGATGTCATACTGCCCTGTAGCATTCGTTTTAAAGATGAAATGCAGCCATATGTACTTCTGGCTACATAATTCGTGATCTCCAGAAACGTAAATAGAGCTACGTTTTCAGAATGACCCTATGTTGGCCACATTTTATGCTTTTCTTACTAGATGTACATTAATAAAACACATTTATTCAGGTGATGTATAAATCTTGATTTCAGCAAACTGACACTTATGATTAGTTTTGTTGTGTTTGATCAAATATCAACAGTTAAATGGTATATGTTTGTATCATTCTAATGACAAAATGATCTTCCAGCATCCTACACAGTAAAGTTCTA[C/A]GATGGTGTCGTCCAGACAGTCAAAGGAATCCATGTGAAGCCCTTCACCAAAGAGGTTCATTCCGTATTTCTATCATGCTCATATTTAGACTCTATCACAAAACCTGCTTTGGCCTCGTACTCATTCTCTCAATCCCTCTATTCAGAGACGAAAGAAACTGAGTGACCAGAATGGAGAGAAGCCAGTGATACAACAGGCAGAAAAGGAAATCCAGGAGAATGAAGCCAATGGTGATAAACAAGCAGCAGGACAGACCAACTGTGTTCCTGAAAAAGATGAGGACGGGATCTCAGAAGTGAATGGAGAAGAAGGCGAACAAATGCGAATTAAAGTGGAAAATGAAAGTGTAAAAGAGGAGAGAGATTTGGAGGAAATAGGTCAACACAATTACAGTAAGTCACTTGTGAAGAAGGGCTCAGGGTTTGAGGAGAAAGAAGAGGAGGTCATGGTGAAGATGGAGGACTCTGCGCTGTTTGACTCTAATGTGAACTTCAGCGAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1493
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000018743 Nonsense 337 951 8 20
ENSDART00000123263 Nonsense 341 932 8 17
ENSDART00000126488 Nonsense 341 544 8 11
ENSDART00000127817 None None 380 None 7
Genomic Location (Zv9):
Chromosome 11 (position 25986841)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 24815666
GRCz11 11 25053282
KASP Assay ID:
554-1418.1 (used for ordering genotyping assays)
KASP Sequence:
CCAAYAATCAGCAAACTCAAGGAAAAGAACCAGACTCCTTACATCTTACA[C/T]AACCGTCCAATGGCACATCAGCATCTCAGGCTCAGTGCCAATCAGAAACC
Long Flanking Sequence:
TGTATTGACCCTTAAACCCCCTTCTAGAGTCTAATGTGGCTCCTTGGAAAAATGTATTGCACACCCCTGCTCTATGGTTATGTTAACATATTATCATAATAATCTACTATGTGTTTGTCCTTTCCCAAAAATACAGCCCTACCATTAGGAGAGGATATTGGAACAGAAATTACAAATATATCTATTTTTTGTGACTCGTAATAACATTCACAATTTACAAATTATGTCATACATTTAATGTCAATCACATGATCATGTGTTTTTGTGACATCTGTTTTATTTTCTCTAGGGAAGAGAAGACTTTCAATGGCACGAAGGAGCTCCAAAAAAAACAAGACTGATTCAGGTTTGACTATTTAACCGTAAAACATGTGAGTACTGTACTTGTGCAATATTATTGCTTTATTATTTATCTCTCTTTTCCAGAAAAAAGTCATAATGATGGCAAGCCCAACAATCAGCAAACTCAAGGAAAAGAACCAGACTCCTTACATCTTACA[C/T]AACCGTCCAATGGCACATCAGCATCTCAGGCTCAGTGCCAATCAGAAACCTTCAAGCCTACAGGTGAGATTCCACCCGCCACATCTTTAAAACATATATGTCGTCAAATAATTACATTATGATTAAGAGTTTTTTAATTGCAGCAGTTAGAAAACAAGCATTTCACAATCCCAACCGGTTCAGCAGAGAGCCTCGTGAGTAAAGATCTATACTAAGCACATTTACACAGTCATGAATGATCTTGAATTAGTGATGACTGAATTGACTTCTCACAGTGTATAGAGTCATCAGAAACCAGCCTCCACCGGTACTCTCTATCAACCTGGATCATAACCTGTATAAATGCAACACCCCTGGCTGCTCGAAGTCCTTCCGCAAAGCAAAACTCCTGCACTATCATATGAAGTACTACCATGGAGAGGAGTGCCCCATAGAACCAGAGCAGACCAGGGAAATGGACAAAAAGACCACACTTAATAGTCACGATGGCTCAAAGAAGA
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa21909
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000018743 Nonsense 719 951 15 20
ENSDART00000123263 Nonsense 724 932 15 17
ENSDART00000126488 None None 544 None 11
ENSDART00000127817 Nonsense 173 380 4 7
Genomic Location (Zv9):
Chromosome 11 (position 25992451)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 24821276
GRCz11 11 25058892
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCACATCTTTTTTTTCTGCAGGAACCAGACTCATCCAGATCTTAAGTTGT[G/A]GCGACAGCCGTGGAAGCCAACTGAAAGATCCAGGATGAAAAGCAAGGCTC
Long Flanking Sequence:
GACCCCATTTTACACCTGTATTCAGCATCACTCACTTGACTAAAGAGCATGGGTCTTTTCTGTAGTTTCACTTAACTTATTGCCAATTGTGTTCCCCAGCTGGGAAATCTTAATGATGTCATTTCCTGCTGTTTTCATTTAAATTTGTTCACTAAATCTTGCTGTCTCATTTGTGTCTGTGTATCCAGGACGGGTGAGAGGTCAGAGACAGAGCCTGAGGTACTGGTATGACAGGGATTGGCTGAGCACTGGCCACATGTACGGCCTCTCTTTCCTGGAAAACTACTCCCATCAAAATGGCAAAAAGATTGCAGCCACCCATCAGCTGTTAGGGGACGTCCAGCATGTGGTTGAAGTCCTCAGTGGCCTGCAGCTCAAAATCAGCGTGCTACAGTGAGTGATGCTGCTTTTTCTCTGTTTGAATCCATTCGATATGTGCTATTTAAAAATCCACATCTTTTTTTTCTGCAGGAACCAGACTCATCCAGATCTTAAGTTGT[G/A]GCGACAGCCGTGGAAGCCAACTGAAAGATCCAGGATGAAAAGCAAGGCTCTTCATGATGCAAAAACAGTTTCTTCTTCAGCAGGCTTGGAGACCATTGAAAATAAAGAGGCGTTTTCTTCATCCTTCCAGGACTACATCAGCAGTGAGCACTGCTACCAAAAACCACAAACTCTGTATCAGGTATTGGAGCCAAGGCTGGTACTAAAAACACGGGTAGAGTCACTGCTGGAAGACCGATTACACAGCACAGAAAGAGTGCCGATGAATGAACAACACTACAATGGAGACATGCTGAAGACTTCTAATAGTCAGCTCTTTAACCACAGCAAGGTGGGTGTCACATTAAATGAGCCTTTAACAGCATTATCACAGTCCAGTTTTGTGAAATGTAATGGTGTGATTTGATATTTTTAAAGGTAAAATAAAATATAGGTATTTGCCATAGTATGAAAATATGGATATATCTAAGCATAGCTGAATAATAAATGTTCAGTATATG
Associated Phenotype:
Not determined