Busch Lab

ZMP

stxbp5a

Ensembl ID:
ENSDARG00000002656
ZFIN ID:
ZDB-GENE-041001-161
Description:
syntaxin-binding protein 5 [Source:RefSeq peptide;Acc:NP_001093451]
Human Orthologue:
STXBP5
Human Description:
syntaxin binding protein 5 (tomosyn) [Source:HGNC Symbol;Acc:19665]
Mouse Orthologue:
Stxbp5
Mouse Description:
syntaxin binding protein 5 (tomosyn) Gene [Source:MGI Symbol;Acc:MGI:1926058]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa39287 Nonsense Mutation detected in F1 DNA Not yet available
sa23739 Nonsense Available for shipment Available now
sa1213 Nonsense F2 line generated Not yet available

Mutation Details

Allele Name:
sa39287
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000101760 Nonsense 153 748 5 22
ENSDART00000101762 Nonsense 153 1129 5 27
ENSDART00000133788 None None 177 None 5
ENSDART00000139417 None None 217 None 6
ENSDART00000142806 Nonsense 153 1128 5 27
Genomic Location (Zv9):
Chromosome 20 (position 31863190)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 31921430
GRCz11 20 31824309
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTCTCTTCAGGATAACGTTCTGTCATCTGCCCTTCCAAAGCAAATGGT[T/A]GTACATCGGCTCGGAACGAGGAAACATCCACATCGTGAATGTGGAGTCCT
Long Flanking Sequence:
CATGGAGAGAACATGCAAACTCAACAAAGAAACTCCAACTGACCTAGCCAGGACTCGAACCAGCGACCTTCTGGCTGTGAAGCGATCATGCTAACCACTGAGCCACTGTGCTGCCCAAGCCTAATAAAGTAAAGAAGTAAAAACACATAAAACACTTACAGTACAGACATTTGCATTACTGATTATTGTTAAACAGTCTGATCGACACAGAAATAAAATAGTTTTGAGCCTATTCTGCTTGCATCGAGGGATTCTGTATCTTTTGCAAGTGGGTAGGAGATCATAACATGGGAAGAGTACTTGAGATGGTTTGCTTAGAATTTTTTTTCTCTGTGTAAAACATATCAGTGTACACGAATACAGTGTTGATGTGCAAATAAGTGATCCTATTGTTTGTTTGTTTTTAAAATAAATGTGAAATAATAAAACCAACAAATTTCTTCTTCTTCATTTTCTCTTCAGGATAACGTTCTGTCATCTGCCCTTCCAAAGCAAATGGT[T/A]GTACATCGGCTCGGAACGAGGAAACATCCACATCGTGAATGTGGAGTCCTTTACCCTCTCAGGATACACCATCATGTGGAACAAAGCCATTGAACTGTGAGTCCTGAAATCTGATTCGCAATATATCATACATGTCACATCTGTCATTTTTCCTGTAGCCTTGTTATGTTTCATTTGCGACTAAGGGATCATTTCGATCAAATGCCGCTTTAAATTGTCAATTCACCTGCTCTCCCTCCATCGCTCTCCTCCTGAGATACTATGCGTTCTTCAATTATTCATTCTAACATTTTGTCAGCAGTTTTGTTTCCCTCCCTGACCCGTTGAAAAGACTGCAGTGCCTTTGAGACCCGGACACACAACCACGCACACACACACACACACACACACACACACACACACACATTTACAGGTGTCTGATCGGATCAGTGTTAGAATAGACAGATGTCCTGCTTTAGTGCGTACATAAACACTTAGAGACAGACACGTTTTGCCCCTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23739
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000101760 Nonsense 159 748 5 22
ENSDART00000101762 Nonsense 159 1129 5 27
ENSDART00000133788 None None 177 None 5
ENSDART00000139417 None None 217 None 6
ENSDART00000142806 Nonsense 159 1128 5 27
Genomic Location (Zv9):
Chromosome 20 (position 31863173)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 31921413
GRCz11 20 31824292
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGTTCTGTCATCTGCCCTTCCAAAGCAAATGGTTGTACATCGGCTCGGAA[C/T]GAGGAAACATCCACATCGTGAATGTGGAGTCCTTTACCCTCTCAGGATAC
Long Flanking Sequence:
AACTCAACAAAGAAACTCCAACTGACCTAGCCAGGACTCGAACCAGCGACCTTCTGGCTGTGAAGCGATCATGCTAACCACTGAGCCACTGTGCTGCCCAAGCCTAATAAAGTAAAGAAGTAAAAACACATAAAACACTTACAGTACAGACATTTGCATTACTGATTATTGTTAAACAGTCTGATCGACACAGAAATAAAATAGTTTTGAGCCTATTCTGCTTGCATCGAGGGATTCTGTATCTTTTGCAAGTGGGTAGGAGATCATAACATGGGAAGAGTACTTGAGATGGTTTGCTTAGAATTTTTTTTCTCTGTGTAAAACATATCAGTGTACACGAATACAGTGTTGATGTGCAAATAAGTGATCCTATTGTTTGTTTGTTTTTAAAATAAATGTGAAATAATAAAACCAACAAATTTCTTCTTCTTCATTTTCTCTTCAGGATAACGTTCTGTCATCTGCCCTTCCAAAGCAAATGGTTGTACATCGGCTCGGAA[C/T]GAGGAAACATCCACATCGTGAATGTGGAGTCCTTTACCCTCTCAGGATACACCATCATGTGGAACAAAGCCATTGAACTGTGAGTCCTGAAATCTGATTCGCAATATATCATACATGTCACATCTGTCATTTTTCCTGTAGCCTTGTTATGTTTCATTTGCGACTAAGGGATCATTTCGATCAAATGCCGCTTTAAATTGTCAATTCACCTGCTCTCCCTCCATCGCTCTCCTCCTGAGATACTATGCGTTCTTCAATTATTCATTCTAACATTTTGTCAGCAGTTTTGTTTCCCTCCCTGACCCGTTGAAAAGACTGCAGTGCCTTTGAGACCCGGACACACAACCACGCACACACACACACACACACACACACACACACACACACATTTACAGGTGTCTGATCGGATCAGTGTTAGAATAGACAGATGTCCTGCTTTAGTGCGTACATAAACACTTAGAGACAGACACGTTTTGCCCCTTGCGACTTTCGGCAATTGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1213
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000101760 Nonsense 505 748 15 22
ENSDART00000101762 Nonsense 505 1129 15 27
ENSDART00000133788 None None 177 None 5
ENSDART00000139417 Nonsense 57 217 3 6
ENSDART00000142806 Nonsense 505 1128 15 27
Genomic Location (Zv9):
Chromosome 20 (position 31816120)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 31874360
GRCz11 20 31777239
KASP Assay ID:
554-1122.1 (used for ordering genotyping assays)
KASP Sequence:
CAGCACAGAGATTGTGGATGAAGACCCATTCGCCATTCAGTTGATGTCTT[G/A]GTGTCCCGAGAGCCGAATGCTTTGTGTGGCTGGTGTCTCTGCCCACRTCA
Long Flanking Sequence:
ACTTTTCAGAAATGTATTCAGCATTACATTTTCAGAATGAGCCTGGGTTTGGTTTATTCATACTCAAGTGGCTCCAAACATATATGAATTTCTTTCTTGCAGTGAACACAAAAATATATCTCTTCTTTTGTGATCATCAGAAAAAAAAAGTTTCTTTCTTCTGTTGAACACAAAAAAGATTTTTCTCATAACTCATAAATGTTTGGAACCACTTGAGGGTGACTACATTTTTTTATTTTCGGGTGAACTGTCCTTTTAACTTCCAATCCTGGTACAGTACGAAATGTTGGTATTCATTTCAAAATTATTTTGGTTACAATTTGGGGAATATCTCTGGTTGACTGTACATTATTTTTCACATTTCCCATTGTGCTCAGTAATGCTCCAGGTCCTGTACAAACTGAAAACAGCAAAGGTGTTTGAGAAGGCACGCTGTAAGGAGGAGAAACCCAGCACAGAGATTGTGGATGAAGACCCATTCGCCATTCAGTTGATGTCTT[G/A]GTGTCCCGAGAGCCGAATGCTTTGTGTGGCTGGTGTCTCTGCCCACGTCATCATATACAGGTTTAGCAAACAGGAAATCACCACAGAAGTAGTGCAGGTAAAGTATGTTTTCATCTCGACTTGAAAACTTGGTTTTCTAAAGAGGAGTGAGTAATGCTGTCCTTATAGGCGCTTTAAGTCTCCCTCTCTCCTTCCCTGTCTCGAGTTATTTTAGTTTCCTGACAACTGCCATGACTCATAACGTTAATAATATTATAAAATCTGTTCATTAAATGGATGTTGTTCAGCGACTTGAATGCGTGTGTGCATTTCTGCATGTGTATGTGCCATCTAAGGATATCTGCAGAACAGTTGTTACTCAGATGCTTACCTAAATCCCTAAGCCTTTCAAAGCTGTTTTAATTAATGTGCACCACATCTTGCTGTATATATTGAGCTTGAATAATTAATACTGCATTCATTTTGCCCTCTCACTGTTTTTTTTTTTTTTTTTTTTTTTT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
whole organism
ZFA:0001094
quality
PATO:0000001
normal
PATO:0000461

Mutation Details

This allele has been removed from public view.

Allele Name:
sa29389
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000101760 Essential Splice Site 599 748 16 22
ENSDART00000101762 Essential Splice Site 600 1129 16 27
ENSDART00000133788 None None 177 None 5
ENSDART00000139417 Essential Splice Site 151 217 4 6
ENSDART00000142806 Essential Splice Site 599 1128 16 27
Genomic Location (Zv9):
Chromosome 20 (position 31814848)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 31873088
GRCz11 20 31775967
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAAGCAGCAACTCCTCAGACGGGATGCGAGACAACGTGCCCTGCCTAAA[G/T]TAATGCTGCTTTAAAGGTTATATGTTTGTGGGCTGCATTCAAAATCACAT
Long Flanking Sequence:
TCTGATTGGTTAGAAAAGGCACATGTTCAGCACAAGTGTGGGAAAACCATTAGTGCTACCATTGGCTGCTGACAGAACATTCACACTTTCGTAAAATGAGGGCAAATTAAACCTATTAGCACCTTCAGTCTCGTGACTCTCACACACATAGAAACACTCACACTAATTAGCATGTCTCTTATTGAGAATAGCGACACCAATGGGGATCAATTAACTCATTGCGTTTAGCTGATTCATACACAGCTGTTCTTGTGTGAGTTACATGTGTGTACATATATATATGTGTGTGTGTGTGTGTGTGTGTATGTTTTACAGTTACTGGAGCTTCGGTTACAGCATGAACTCAATGATCTAGAGTCTCCAGAAGGGGGAGGAGATCAGACGCCAGCTCCGCCCACACCAAGCACCTCCCCCAGTCCTCAAACCGCTGGCCCCCAGACACACACCTCCTCAAGCAGCAACTCCTCAGACGGGATGCGAGACAACGTGCCCTGCCTAAA[G/T]TAATGCTGCTTTAAAGGTTATATGTTTGTGGGCTGCATTCAAAATCACATACTGTCTGAGTAGGTGCATATTTTGGACGAGTGATTACTGTGCAACCTTTAAAGAGAATATGTTCTGTATGAGGTGAATGTGTGTAGGATGAATATAATCCGGAGGTACATTTGGCAGGTTGTTATTATCATGTGACAGTTGCGTCACTTTACTGACATTCACAAATCTCCTCCCGTGCCCTCATAGGATAGTAAAATAAGCTTCAGAATCTTGCTGGAAGTAGTTGTAAGTTATTCAGAAATGTTTTTTGTTGAGTACACTGAATTTACGACATTCTTCTTTTTTTGGGTACTGTTTTGGACCTACTATAGTATACAGTAGGGAAATACATTATGGGATTTTGGATGCAGCTAGCAGGATTTTTTTCCTGCTCAAATTATGTTATATCATGTAATTGCAGTGTTGGGAAAGCTACTTGAAAAATGTTGTGAGCTAAGCTATTAGCTAGT
Associated Phenotype:
Not determined