Busch Lab

ZMP

tmod2

Ensembl ID:
ENSDARG00000002571
ZFIN ID:
ZDB-GENE-040912-185
Description:
tropomodulin-2 [Source:RefSeq peptide;Acc:NP_001004608]
Human Orthologues:
TMOD2, TMOD3
Human Descriptions:
tropomodulin 2 (neuronal) [Source:HGNC Symbol;Acc:11872]
tropomodulin 3 (ubiquitous) [Source:HGNC Symbol;Acc:11873]
Mouse Orthologues:
Tmod2, Tmod3
Mouse Descriptions:
tropomodulin 2 Gene [Source:MGI Symbol;Acc:MGI:1355335]
tropomodulin 3 Gene [Source:MGI Symbol;Acc:MGI:1355315]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa29074 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa17697 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa29074
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000012164 Essential Splice Site 202 344 6 10
ENSDART00000130473 Essential Splice Site 202 344 5 10
Genomic Location (Zv9):
Chromosome 18 (position 37805192)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 39386895
GRCz11 18 39367903
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAGGCCAATGATCCCACGTTGACTGAAGTCAATCTCAACAACATCAAGG[T/C]AATGAGACTTATCCACTAAATGTGTTCTAATGAGACATTAAAAACATAAA
Long Flanking Sequence:
AGTGACAAACTGCAAGCTTTAGACATTTATATAGGTTTTATACTTTCTAAACAGCAATTTTGGAACACACTAGCTCAGGGGTCACCAAACTTGTTCCTGGAGAGCCGGTGTCCTGCAGATTTTAGCTCCAACCCTAATCAAACACACCTGAACAAGCTAATCAAGGTCTTACTAGGTATAGTTGAAACATCTAAGCAGGTGTGTTGAGGCAAGTTGGAGCTAAACCCTGCTGGGACAACAGCCCTCCAGGACCGAGACTGGTGACCCCTGCACTAGCAAATAGATATCCTTAATTTTCATTTCACAGGACCTATAATGCACATGTTATTCAGTGGAAGCTCATTTGAGAATAAATCATTGTCTTGTAGATGTCATTAAAGGAGAAAAGGTAAAGCCTGTTTTTGATGAACCTCCAAACCCTACAAACGTTGAAGAAAGTCTGCAGAGGATAAAGGCCAATGATCCCACGTTGACTGAAGTCAATCTCAACAACATCAAGG[T/C]AATGAGACTTATCCACTAAATGTGTTCTAATGAGACATTAAAAACATAAACATACAAATTTCACTGAAATCCTATCATTATAAATGATGTTTATTAGTTTTATATTACTTAATGTGAAAAATGTGACTCTTGTGCAGACAAGTTTTTTTTTTTTTTTTGCAAAAGGTTACATGAACCATTTTAAATAATGCTGGGGAGCTTGATCATCAGGTTTTATGTTCATGTCAGCTAATTACATATAATGACGGACATTCTTAAATTATTCTTAAAATTTCACTCACTAGTGGTGCAACCAGTCACAGTTTATTTTATGATTCATACTGACCACAACTTACGATTTACATTTGATCCAGTGATAATCAGCTAAATGTAACCCAGACAGCCACATTTCAGATGATTTGTTAAATCCGAATAAGTTACAGTACATCCATGAGGACTTTTAAATAAGCCAGTTCTAGTTCTGGAGCTTCCAGTGAACTGTCCTGCTATAATAAACTCGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17697
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000012164 Essential Splice Site 286 344 8 10
ENSDART00000130473 Essential Splice Site 286 344 7 10
Genomic Location (Zv9):
Chromosome 18 (position 37810921)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 39392624
GRCz11 18 39373632
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGCTCTTCGAGACAACGACACGCTTTCAGAGATCAAGATCKACAACCAGG[T/A]AAGGTCACAAGCACATACTGACYGTCACAAACTGTTAATGGTCGTTTTTR
Long Flanking Sequence:
TGCATCTGCTTGTATTGCTCCTGAGTCATTTCTAATTAATTTAAGAGTAATGTAGTTTCATTCTTGCGTCATCGTGAAATAAGGTTTAATTAAAATTTTGGAGACTTGTAAAAACTTAACACATGTGGTGTCCAAGGTTATTCATAAAAGGTCATGTATGCATTTTAAATATTTTAAAAAAGCTTTCAAAAAGACTTTATATCAGGTTCCTGCAGAATCCCTGATCACAAATATGTTTGTCTTTTTTATCATTATTGTTTACATACAATGTTGGCTAATTTTAGCACTATAAACATTCATATAGTACATCTTAATGCCATGTAAAGCTTTGTTTGTTTCTTTGTGTTCGTTGCAGGCGTTCTCAGACATGCTGCGAGAAAATAAGACGCTAAGGAGTTTGAATTTGGAGTCTAATTTCATCACCGGTGCAGGAGTTCAGGCTCTTGTAGAAGCTCTTCGAGACAACGACACGCTTTCAGAGATCAAGATCGACAACCAGG[T/A]AAGGTCACAAGCACATACTGACCGTCACAAACTGTTAATGGTCGTTTTTGATTTATGGGTGTTTTCGATTGATTTTATCTTGCATGACATCAAACTGTGAGACATCAGTATCTTCTCAGACAACATTTGCTGTTGAAAAGTGTACCAACATGGCGCTTATTTCTATTTTTAGTTCTTTGAAACCATGAAATGTCCGGATTTTTAATAGAATTGCGGTAAAAATAAAGAAAGAATTGATGATTAGTCAAATTATTTTTATTATTATTATTAATGTTTAATGGATTATCAAAATAATTATTTGTTGCAGCCCTGTTTTTTTTTTTTTTTTAAAGTCTGATTTACCGTATTTGTTTGTAAATAACCAATATTTGTGAACTAAAACGAAAGATTTAAGTTATATTTTAAGGTGCATTTTACTATTTTTCTATTCTTCTTATTTTATTTACGCAGAACATTAAAATGTTTCAAATTTGAGCATTTTTAAGCTTATTAATAATATT
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa29075
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000012164 None None 344 None 10
ENSDART00000130473 Essential Splice Site None 344 10 10
Genomic Location (Zv9):
Chromosome 18 (position 37826434)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 39408137
GRCz11 18 39389145
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCGTAAACAAATGCTGAGTTGTGAGTATGATTTTTTTTTTTCTTCTCCA[G/A]GTTATGCTTCATGTTTCATTCCATCTTTATTTGATTATGGGTTAAAGGTT
Long Flanking Sequence:
ATTCTGGGAGCATTTAGTAGTCCTGGTGCAGCCTCAAGCACACACAAACACACACACACACATGCACGTTTGTGATCGCATGCATGTTTGCAATGTACAGCAAAGCTTTATCTTTTAACTAAAGCGAACTAACAGTGTAAAATACTGAGTTGACCTTTATGCCACTTGCCATTTTCCATAAGCTTGTTCGTCCTACGAGGTTGATGGATTGTGGTTTATAGTGTAGAGCACAGACACTTCGGCACGTTTTTGAGGAAGGCGGTGAACAGGATGAATTCCATAGCTGGATTAAACAGGGGAACATGTTTTACACCTGCTTTAAATGCAAAAGCTAGGACCAAGTTTGAAGTTTTCTGTTTCTCTCGGTTGTGTTTTATTGATTTGTACTGTTCTGTTTTGTAAGAGCCTTGTGTATCAACTGTCTTTTGAGTTTGTATGTTCTTATTTTTCTTCGTAAACAAATGCTGAGTTGTGAGTATGATTTTTTTTTTTCTTCTCCA[G/A]GTTATGCTTCATGTTTCATTCCATCTTTATTTGATTATGGGTTAAAGGTTCGTGCTTTGCTGAAAGCTTGTTGCTTGTAAGGAGCTCTGCAGTCTATATATGAAATCTCCATCTCAGATCCTCTTCAGAAGACTGCACATTTAAAGATATACATATAAATATCATGTATCGTAAACGCCTCTTATATTGCCGCAGTTTTGTATGTTGATACTTTATGTCTGGACTCCAGAAGAGGAAAACTTATTATGTACTGTTAAAAATACAAAACTCTGTAAAGTATCAGACGTCCTTAATAAAATGTATGTTTTTACAGATTTGTTGTCAGATTTATTTTCTGTTAAATGTGCTGTAAGATTAAAAGACATGACTGTTGAACAATTGCGTAAATTAAACTCACAAAAATTATTGATTTTAAGAACTTTCTTTAAGAAATTGATAGTTTTACAGTTGACTAAAAGTACTTTTATACTGATTGCTTCTAGATTAAAAAAACCTGAACT
Associated Phenotype:
Not determined