Busch Lab

ZMP

prdm1a

Ensembl ID:
ENSDARG00000002445
ZFIN ID:
ZDB-GENE-030131-2193
Description:
PR domain zinc finger protein 1 [Source:RefSeq peptide;Acc:NP_955809]
Human Orthologue:
PRDM1
Human Description:
PR domain containing 1, with ZNF domain [Source:HGNC Symbol;Acc:9346]
Mouse Orthologue:
Prdm1
Mouse Description:
PR domain containing 1, with ZNF domain Gene [Source:MGI Symbol;Acc:MGI:99655]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa9796 Nonsense Available for shipment Available now
sa6407 Nonsense Mutation detected in F1 DNA Not yet available
sa22750 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa9796
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017445 Nonsense 131 776 3 7
Genomic Location (Zv9):
Chromosome 16 (position 8656914)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 7520168
GRCz11 16 7437514
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGTTACACTGCAGAAAATGTCCCCAAAGATGCGAACAGGAAGTACTTCTG[G/A]CGGGTGAGTTGTTTTGTTTCWGAACATTTCAAGTAGCAGCAGATAAAAGA
Long Flanking Sequence:
AGCAGATGACAACAGAATTTTCAGTTTTGGTCTGAACTATGCTTTTAAGCTTTGGTGTTTTCCTTGGAAGAAGTGTCTGTTCGGTTAATAAGAGGTGAAGTGGGACAAACGATTGGTCTCTCTCAGCCTTAGGACACAACCTTGATGACCTTTAAGCTTCCTGTGGTTGTCAGAAGAGGTGAGGGCTGAAGAGAGGCATGGCTCCATGTCTTTCAAGTGCGCACATCTGGCTGACTGTCAATTAATTACCTCTCACTCGCACATACTCAGTATGCCTTGTTAGCACTGCAGAAATCACATCTCCGAAAATGATCTGAAAGTGCACATGAGACTCTGTAAACTCCTCGTTTCCTAACCACCTGTTTTCCCCTTTTGTTCGAACAGGTTATTGGTGTAGTAAGCAGAGAATACATCCCTAAAGGCACGCGCTTTGGCCCCCTTGTGGGAGAAAGTTACACTGCAGAAAATGTCCCCAAAGATGCGAACAGGAAGTACTTCTG[G/A]CGGGTGAGTTGTTTTGTTTCTGAACATTTCAAGTAGCAGCAGATAAAAGAAGAAGAAAGAAATACATACTGGGTCACTTCCTGTTCCACTGACTGACTTCCTATGTGACATCATGGGCTGGAGGGTTATGTAGAAGCAGTCAGTTTATGTTCTCAGAGCGATCAGAAACTGCTGAGTAAAGATCTGCTGTTTTGGGAACTGCACTGGCGTTGAATGACTGAGACAGCAGCGATTCGTTCCATGTACTGATATCTTTATTTGACTGTGCAGCGCTCTGAGCGTTTGGGACAGGAAGCGCTGTATGACTCTGCAGATCTGCTACTGTGAATTTAGCCTTTTTATGAATATGTCGGCTTTGATAGATCATCTGTGTCACAATGCATTTGAGGAGTGATAAGAGAAATCAAGATGCAGCATCACAGTTGTTGTGTCACTACCATTAAAAACGATCCGTTTCCCTCACTCCTTTGTGACTTGCAGCTGTTGTCTACAGCTGTCGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6407
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017445 Nonsense 622 776 7 7
Genomic Location (Zv9):
Chromosome 16 (position 8652099)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 7515353
GRCz11 16 7432699
KASP Assay ID:
554-5124.1 (used for ordering genotyping assays)
KASP Sequence:
CCTACCAGTGCAAGATCTGCCCAGCCAAGTTCACACAGTTTGTCCACCTC[A/T]AGCTGCACAAGCGGCTGCACACGCGAGAACGTCCACACCAATGCCCACAT
Long Flanking Sequence:
CTCGCCCACCTGCAGAAACACTATTTGGTCCACACAGGAGAGAAACCCCACGAGTGCCAGGTAAACAACATCAATACTAATAACTTCAAACATATTTTTAAACGAGCACTACACTTGGAAATAGGCCAATTTTACAACTAACTACAGAGGATTCAATATTTAAATCGGAAAACTATCAGAACTTTTTTATGAGATGCTAATAGTCTCTTTTGATTTAGCGATTCATGCTAGGCTAATAGTGACCTGGAGATTGATTGAATGTTTTCAAAAATGATAACACTCAAATATTTAACTCTAGGAAAGGGGTAAAATGAGATGGTTTCTTTAAGATTCCTTCTTAGATAAGATTGAGATCCTAAAACTCTGCTTTCACTTCACAGGTGTGTCACAAGCGTTTCAGCAGCACTAGCAACCTGAAAACCCATTTGCGATTACATTCTGGGGAAAAGCCCTACCAGTGCAAGATCTGCCCAGCCAAGTTCACACAGTTTGTCCACCTC[A/T]AGCTGCACAAGCGGCTGCACACGCGAGAACGTCCACACCAATGCCCACATTGCCACCACAACTACATTCACCTCAGCAGCCTACGGTTCCACCTCAAGGGCTACTGCCTCGCAGTCTCTCCTTCTCCAAGCTGCAGCTTGGACGAACTCAACCGAGTCAACGAGGAAATTGAACGCTTTGACATCAGCGATAATGCCGACCGGCTAGAAGAAATGGAAGGGTTTGATGTGGAGGGCATGGTGGAGAAGCAGATATTTGGCCTGCTCTGGCAGGAGATGGATTTTAAGGCGTCTTATCACAAAGGTAGCACTGGAGGGGACCTGCACCCCCGAGCGCCTGCATTATCCGCGTATCATCTGAATGAGCATGACAGTGAAGCTTCTGTCATCAAAGTTCATCGCAGCAGCCCGATCCAACTCCTACCCATCAAGGTGAAAAAGGAGACAGAGGAGGCCATGGATACCTAGAGGCTTCCTGACCAGTTGACTGACTGAACATTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22750
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017445 Nonsense 732 776 7 7
Genomic Location (Zv9):
Chromosome 16 (position 8651769)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 7515023
GRCz11 16 7432369
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTTTAAGGCGTCTTATCACAAAGGTAGCACTGGAGGGGACCTGCACCCC[C/T]GAGCGCCTGCATTATCCGCGTATCATCTGAATGAGCATGACAGTGAAGCT
Long Flanking Sequence:
TTCCTTCTTAGATAAGATTGAGATCCTAAAACTCTGCTTTCACTTCACAGGTGTGTCACAAGCGTTTCAGCAGCACTAGCAACCTGAAAACCCATTTGCGATTACATTCTGGGGAAAAGCCCTACCAGTGCAAGATCTGCCCAGCCAAGTTCACACAGTTTGTCCACCTCAAGCTGCACAAGCGGCTGCACACGCGAGAACGTCCACACCAATGCCCACATTGCCACCACAACTACATTCACCTCAGCAGCCTACGGTTCCACCTCAAGGGCTACTGCCTCGCAGTCTCTCCTTCTCCAAGCTGCAGCTTGGACGAACTCAACCGAGTCAACGAGGAAATTGAACGCTTTGACATCAGCGATAATGCCGACCGGCTAGAAGAAATGGAAGGGTTTGATGTGGAGGGCATGGTGGAGAAGCAGATATTTGGCCTGCTCTGGCAGGAGATGGATTTTAAGGCGTCTTATCACAAAGGTAGCACTGGAGGGGACCTGCACCCC[C/T]GAGCGCCTGCATTATCCGCGTATCATCTGAATGAGCATGACAGTGAAGCTTCTGTCATCAAAGTTCATCGCAGCAGCCCGATCCAACTCCTACCCATCAAGGTGAAAAAGGAGACAGAGGAGGCCATGGATACCTAGAGGCTTCCTGACCAGTTGACTGACTGAACATTCATAAGTTGTTCTTATCAAAACGAAACAAAAAAAAAATAGGCTCAGGCCTATATATTCAGGGACTTCCGTACTCAGGGCTAACAGACATTGATCATCAGTGGTCCAGTATGTCCTACACAAATGATAAAGACAATCATATTCTTTTATTATTATAACTATTATTATTATTGTTAATATTATTTGCTCTAGTGTTCATTTCAGTTTGTAATCTATTTAATTTATTGTTCAACATGTCCTCCTTCACGACCGATACATGGAAATAATGTTTACAATGACTGGTTGATTCATTGTAATTTGCTGTCTTGTATATTTCTTCTTCTCTTTCCTTTT
Associated Phenotype:
Not determined