Busch Lab

ZMP

nalcn

Ensembl ID:
ENSDARG00000001835
ZFIN ID:
ZDB-GENE-050410-12
Description:
sodium leak channel non-selective protein [Source:RefSeq peptide;Acc:NP_001017549]
Human Orthologues:
CACNA1B, NALCN
Human Descriptions:
calcium channel, voltage-dependent, N type, alpha 1B subunit [Source:HGNC Symbol;Acc:1389]
sodium leak channel, non-selective [Source:HGNC Symbol;Acc:19082]
Mouse Orthologue:
Nalcn
Mouse Description:
sodium leak channel, non-selective Gene [Source:MGI Symbol;Acc:MGI:2444306]

Alleles

There are 8 alleles of this gene:

Allele Name Consequence Status Availability
sa30919 Nonsense Mutation detected in F1 DNA Not yet available
sa41452 Nonsense Mutation detected in F1 DNA Not yet available
sa21514 Essential Splice Site Available for shipment Available now
sa11942 Essential Splice Site Available for shipment Available now
sa18947 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa6116 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa30919
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048469 Nonsense 10 1742 1 44
ENSDART00000060066 None None 384 3 14
ENSDART00000135022 None None 1717 None 43
ENSDART00000142289 None None 168 None 4
ENSDART00000145204 Nonsense 10 409 3 13
Genomic Location (Zv9):
Chromosome 9 (position 32775660)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 31931606
GRCz11 9 31742352
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGGTATGCCTGATCGCATGTTATGTGCAGTGCTGGAGCAATTTCAGCTT[T/A]ACTTTTCCCGTTGGTATGTGCGCTTTGTTTCAGTGAGTGTGTGATATCCA
Long Flanking Sequence:
TTCATCATGTTGTATGATGTTTGACGCAAGAAGGCCTGCCTGACCTTACTGGACATGACAGTTGGTTGATGTGGATTTGTTGCTTTTGTGTTGATATCACATGTAAAGGTCAGGCTTTCAGCTGTTGTGCGATGCAGCTTTCATTGGCCGGACTCTTTTCATAAACAAGCATTAAAGGCTAATGGTGTTCTTGCAGGACAGGCCTCAACTCAACAGGCCCCCATCAGCTGTCTTTCGTACTGAATTCAGTTCCTGTCTATGCCGGGGATGAATGCACCAATGAGGAGCCTGACCGTGAGTAACCTGGTCCCACGATCCCATCCGTCCATGACTCCGCCACTCAGTGTTGCATATATGCCTTGTCTGACGTGGTGGACATTATTTGTCGATATAATTGTACCCGTTAGGTACACCATATGCCATGTTGACTAACTGTTGTGTGTTATTTACAGGGTATGCCTGATCGCATGTTATGTGCAGTGCTGGAGCAATTTCAGCTT[T/A]ACTTTTCCCGTTGGTATGTGCGCTTTGTTTCAGTGAGTGTGTGATATCCATGTTTTTTTAATTATTGTCTTCGGTTAGAGTGGCTCTAGTGCCAGTAGTCTGTCGTCTGTTTTGCGTTGAAGATCCAGTGTGATCTTTGCACAAGGTAAGTCCGTATTTCTGTGTAGTCGACAGTCTGTGTTTTATGTACATCATACGCTTGATTGTGTTTAACGGTGGCTGTGCAACACTACAACACATATTGTCTGGTACCATACAAAGCTCTGTGTCCTCATATCGTTTGTACAGCCACAATGAACACACAGCTCAAATCTGTTTGCATGATACTGTTACTAGATGTTTCTGTGACACGATGCTTCTTCTGAGGTGTTTTATTTTCATTCCATTCAATTAGCGTCAAGGTTTTGCTAAAGTAAATTGCTTATCTTCTTTTAATATTTCATTCTGTAATTGAATTGCTCCAAACACATATTAAACAGAGGTAGCATTCAATAAGCAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41452
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048469 Nonsense 627 1742 15 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Nonsense 602 1717 14 43
ENSDART00000142289 None None 168 None 4
ENSDART00000145204 None None 409 None 13
Genomic Location (Zv9):
Chromosome 9 (position 32704240)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 31860186
GRCz11 9 31670932
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTAGATCCTTCTGAGTCTTTTTGTTGCTGTTATTTTGGACAATCTTGAGT[T/A]GGATGAAGACCTGAAAAAGTTAAAACAGGTAAGTCATTATTCTTTTTATT
Long Flanking Sequence:
ATAACCATTTAGAATCTATTACTGAATCAATACTAAATTGTCTGCATCTGCAATGCGGTGCACTGAAGAAACAATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACATATTTATATATATTTATATATATATATATATCATATTAAAGCCACTTCACTATGATTTTCTTTTGAAATGTTGAGTTAAGGAGTGACTGTTAAAAGAAATTTCTTCAAATTGTTTATCTGCTTTGTCCTGACAACAATCTGAATGCATATAAAGTAGATTTTGTCAAACTGTATTGAATAAAAATGGAATCTGTTTTGTTTTCTAGATCCTTCTGAGTCTTTTTGTTGCTGTTATTTTGGACAATCTTGAGT[T/A]GGATGAAGACCTGAAAAAGTTAAAACAGGTAAGTCATTATTCTTTTTATTTTGCTGATATACTACTCTGCAGATGTTTGGGGTTGTAAGCATTCTGTATGCCTCTAAAAGAATTATTTTATGGTCAACAACAGTAAAACCACTAGTTTATGTGAATATTATGGGTGCATCAATCATTTGTCTAATGATAACTAATAATTGCTTCTGGAACAGTGATTGATTTGCTGTGCTTATAAAGTTTTGCTGATGACACAAAAAGATGTGCACCTCTTGTCAATGTTTCTTTACATTGGTTTATTTTAAAAATTTACAAATGTATTCCTGTAATGGTAAAGCCGAAGATAGCAAAGCCAGGAAGATACCAAATGCAGGAAAACAGGCAAGAACTAAAACACAGGTATATTCTACAATGCGTAACTCCATTAGTGGACAACACCAGGAGAAGAAACAAAATACACACTAGAGAACAATGAACTAATCAACAGATAATGGCCAACAGAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21514
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048469 Essential Splice Site 730 1742 18 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Essential Splice Site 705 1717 17 43
ENSDART00000142289 None None 168 None 4
ENSDART00000145204 None None 409 None 13
Genomic Location (Zv9):
Chromosome 9 (position 32665969)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 31821915
GRCz11 9 31632661
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGATCTGTGCATTGATCTGTGTACATATCTGTAAACCTCTTCTTCTTCCC[A/T]GCTACGAAAGTCAGTATTTAGCATCCGGGCTCGCAACCTAATGGAAAAGG
Long Flanking Sequence:
GACGTGAAGTCTCCTGTGTGTTTGCGTGTGCCACAGGGAGAGTTTCATGAAGCAGTTCATCGACCGACAGCAGCAGGACCCTAGCTGTCTGTTCCGTCGCCTTCCCTCAGCATCATCCTCGTCTTGCGACCATTCCAAACGCTCTGCCATTGAGGATAATAAATACATAGATCAGAAGGTAGCACATTCCATCACTCCTACAGTCTGCCCCCTCAATACACACAGGGACCAAACAATAATCTCATGAATGTTCTGAAAGGAACCGATCCATTTCCCACGCAACAAGACTCAAATAACCAGCAGTTATATAACAATATTTTCTTTATTACATTGGGATGTTTTTGTTTGCTAGTGTCAAAGTCAGATTTACCCACATAATAATAGTTGTTTGGAGATGTACACTTTTGAATTGTGCTGTGTATTGATCTGTGTATTGTGAATATGTGTATATGATCTGTGCATTGATCTGTGTACATATCTGTAAACCTCTTCTTCTTCCC[A/T]GCTACGAAAGTCAGTATTTAGCATCCGGGCTCGCAACCTAATGGAAAAGGAAATCACTGTCAACAAAATTTTGCGGTGAGCTTGTTTTTCTCCTTTTAATCACAGATCTTGTAGACATCAGGAATATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTACAGTGAAATTAACTACCAACTAATAAATAAAAATTAGTTTATAATTAAGGCAAATATAGAGGAAATATGGCAAAATTTCAGGGAAATAAATATTTTATTTTATTTTATTTCACAACCCACAATTTTATAATTAAGGGAAATATTATGGGAATATGGCAAAATTTCATAGAAAAATATATTTTGTTTTATATTATTTATTTATTTATTTATTGTCTTTGTCCCTGATCCATCAGGGTTTGCCACAGTCAAATGAACCGCCAACTACTACTGTTTTACACAGCAGATGATCTTTCAGCCGCAATCAACCATCGAGCTGGGAATTATTTTAGTTTAT
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa3716
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048469 Nonsense 1318 1742 34 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Nonsense 1293 1717 33 43
ENSDART00000142289 None None 168 None 4
ENSDART00000145204 None None 409 None 13
ENSDART00000048469 Nonsense 1318 1742 34 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Nonsense 1293 1717 33 43
ENSDART00000142289 None None 168 None 4
ENSDART00000145204 None None 409 None 13
Genomic Location (Zv9):
Chromosome 9 (position 32638217)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 31794163
GRCz11 9 31604909
KASP Assay ID:
2260-2008.1 (used for ordering genotyping assays)
KASP Sequence:
TACTCGTCACATCCCTCGGGCTCATATGGATCATTCTGCACTTCGCTTTA[C/T]AGGTACAGTCTAATATATTTTAGATTTTAAACAAAGGGAGTTTTAGCTGA
Long Flanking Sequence:
TTGAATTAGCCAGTTGCATTTTATAAAATGGTGTAACTTTTTCTAGAATTTGTGTTGTATTTTAGCATTAAAATAATAAATGTAATTGTTTTCCCTGTGTTTCAGTGGGATGAGCTTGGCGCAGTTACGTTTCCCTTGGCCACAATGTCAGTGGTTTTCACTTTCATTTTTGTTTTGGAGGTAAATATATAATACATTTTGTGTATAGTACAGTCTCATGTTCTGTTTCTTGTTCTTTCATGAGTCAGACCAAGCTATATATATTTTTTACAAACACACACACACACACACACACAAATTAAATTCACCAGAGGCCTCACAGTTCACAAGGTCTTTTGGAAATATTGTGTGGTCATGACATAATGAAATTTGCTGTGCCGCAGGTGACTATGAAGCTGATAGCCATGTCACCAGCTGGATACTGGCAGAGCAGGAGGAACAGATATGACCTACTCGTCACATCCCTCGGGCTCATATGGATCATTCTGCACTTCGCTTTA[C/T]AGGTACAGTCTAATATATTTTAGATTTTAAACAAAGGGAGTTTTAGCTGAATTGGTTGATTTTTATATTGTACAATTAAGATAAGGTAATTAAAGTATTTTGTAAAAAAAAAAAAGGCCAAAAAGACTAGTTGTTTTCAGTTAACATTGGTTAAATGTGTCAATAGCACACTTGATTCTAATAATAGAATTATTTTGAGGTAATTTTAACTTAGCATAGAAAATTTAAATGTAAGTTTAAAAATAGACCAAAATTATGCAAAGTAACATTTAATCATTTTCTTTTTGGCTTAGTCCCTTTATTAATCAGGAGTTGCCACAGCAGAATGAACCGCCTACTTACAAACACTCTCATTTACACACATACACTTCGAACAATTTAGCTCACCCAATTCACCTATAGCACATGTCTTTGGACTTGTGGGGGAAACCGGAGCACCCGGAGGAAACCCACACGAACACATGCAAAGTGCACACAGAAATCATAGAAAAAAACTAAAT
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa18948
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048469 Nonsense 1318 1742 34 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Nonsense 1293 1717 33 43
ENSDART00000142289 None None 168 None 4
ENSDART00000145204 None None 409 None 13
ENSDART00000048469 Nonsense 1318 1742 34 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Nonsense 1293 1717 33 43
ENSDART00000142289 None None 168 None 4
ENSDART00000145204 None None 409 None 13
Genomic Location (Zv9):
Chromosome 9 (position 32638217)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 31794163
GRCz11 9 31604909
KASP Assay ID:
2260-2008.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACTCGTCACATCCCTCGGGCTCATATGGATCATTCTGCACTTCGCTTTA[C/T]AGGTACAGTCTAATATATTTTAGATTTTAAACAAAGGGAGTTTTAGCTGA
Long Flanking Sequence:
TTGAATTAGCCAGTTGCATTTTATAAAATGGTGTAACTTTTTCTAGAATTTGTGTTGTATTTTAGCATTAAAATAATAAATGTAATTGTTTTCCCTGTGTTTCAGTGGGATGAGCTTGGCGCAGTTACGTTTCCCTTGGCCACAATGTCAGTGGTTTTCACTTTCATTTTTGTTTTGGAGGTAAATATATAATACATTTTGTGTATAGTACAGTCTCATGTTCTGTTTCTTGTTCTTTCATGAGTCAGACCAAGCTATATATATTTTTTACAAACACACACACACACACACACACAAATTAAATTCACCAGAGGCCTCACAGTTCACAAGGTCTTTTGGAAATATTGTGTGGTCATGACATAATGAAATTTGCTGTGCCGCAGGTGACTATGAAGCTGATAGCCATGTCACCAGCTGGATACTGGCAGAGCAGGAGGAACAGATATGACCTACTCGTCACATCCCTCGGGCTCATATGGATCATTCTGCACTTCGCTTTA[C/T]AGGTACAGTCTAATATATTTTAGATTTTAAACAAAGGGAGTTTTAGCTGAATTGGTTGATTTTTATATTGTACAATTAAGATAAGGTAATTAAAGTATTTTGTAAAAAAAAAAAAGGCCAAAAAGACTAGTTGTTTTCAGTTAACATTGGTTAAATGTGTCAATAGCACACTTGATTCTAATAATAGAATTATTTTGAGGTAATTTTAACTTAGCATAGAAAATTTAAATGTAAGTTTAAAAATAGACCAAAATTATGCAAAGTAACATTTAATCATTTTCTTTTTGGCTTAGTCCCTTTATTAATCAGGAGTTGCCACAGCAGAATGAACCGCCTACTTACAAACACTCTCATTTACACACATACACTTCGAACAATTTAGCTCACCCAATTCACCTATAGCACATGTCTTTGGACTTGTGGGGGAAACCGGAGCACCCGGAGGAAACCCACACGAACACATGCAAAGTGCACACAGAAATCATAGAAAAAAACTAAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11942
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048469 Essential Splice Site 1558 1742 40 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Essential Splice Site 1533 1717 39 43
ENSDART00000142289 Essential Splice Site 41 168 1 4
ENSDART00000145204 None None 409 None 13
ENSDART00000048469 Essential Splice Site 1558 1742 40 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Essential Splice Site 1533 1717 39 43
ENSDART00000142289 Essential Splice Site 41 168 1 4
ENSDART00000145204 None None 409 None 13
Genomic Location (Zv9):
Chromosome 9 (position 32629202)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 31785148
GRCz11 9 31595894
KASP Assay ID:
2260-2007.1 (used for ordering genotyping assays)
KASP Sequence:
ATGGAGCGTCTGCACAATGGAGGAGACGTCAYCTTTCATGATGTACTGAG[G/A]TTAGAAAAGAAAAAGCCTGCTATTAATTCTAGCACATAATTTTACCTTTA
Long Flanking Sequence:
GTAACCATTGAATTCCATATTAGAATAAACAAATACTATATAGGTCAATGGTTACAGGTTTCCAGCATTTTTCAGAATATCTTCTTTTTTTGTTCATCAGAATAAAGAAGCTCAAACAGATTTGGAATGAGTGAACATTGTGTAAATGATGAGAATTTTTAGTTTTGGATCAGTTTAAGGGATTAAACTGTTGCTAATGATAGTAATTATTTACAGTATTTATATAGAAACAGAGCAATAATCTGAGAATTGTCTTTTAGTGTTTAGTCTAGAAACTATTATTAGGATAAGGTTTGTTAATCCAGCATCTGCTATTACAATAAAATAAAATTTGTAACACAGGGAGTGATTCCGACCTCTCGGGTGAAGTTTCTGCTCCGTCTGCTGAGAGGTCGTCTGGAAGTGGATCTGGACAAAGACAAGCTTCTCTTTAAACACATGTGTTATGAGATGGAGCGTCTGCACAATGGAGGAGACGTCACCTTTCATGATGTACTGAG[G/A]TTAGAAAAGAAAAAGCCTGCTATTAATTCTAGCACATAATTTTACCTTTATAACGAATCAGACTACATAAGATCTACTGCGATAAGATCTTCTTACCCAGACAAAACAGCTAGCACTGAAAGGGTCATATTGTACCACCCTCACTGCTGTGTTGTTGATGTTCTGTGGCCCATATGAAGTCATGTATGATTGTGTGAATGTGTGTGTGTTTCAGCATGCTGTCGTATCGTTCAGTTGATATCCGCAAGAGTCTTCAGCTGGAGGAGCTGTTGGCAAGAGAGCAGCTTGAATACACTATAGAGGAGGAAGTGGCCAAACAAACCATCCGCATGTGGTTGAAGAAGTGCCTGAAACGCATCAGAGCCGTGAGTCCATACAAACACTCATCGTTCAATTCAGATGCTGGATGACTACAGAAGAGGATTAGCGCCTATCAATAATAATGATAAACAACCTTCTCAAGATTAATTGGCATTATAATGTGTGATTTGAAGAAAATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18947
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048469 Essential Splice Site 1558 1742 40 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Essential Splice Site 1533 1717 39 43
ENSDART00000142289 Essential Splice Site 41 168 1 4
ENSDART00000145204 None None 409 None 13
ENSDART00000048469 Essential Splice Site 1558 1742 40 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Essential Splice Site 1533 1717 39 43
ENSDART00000142289 Essential Splice Site 41 168 1 4
ENSDART00000145204 None None 409 None 13
Genomic Location (Zv9):
Chromosome 9 (position 32629202)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 31785148
GRCz11 9 31595894
KASP Assay ID:
2260-2007.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGGAGCGTCTGCACAATGGAGGAGACGTCACCTTTCATGATGTACTGAG[G/A]TTAGAAAAGAAAAAGCCTGCTATTAATTCTAGCACATAATTTTACCTTTA
Long Flanking Sequence:
GTAACCATTGAATTCCATATTAGAATAAACAAATACTATATAGGTCAATGGTTACAGGTTTCCAGCATTTTTCAGAATATCTTCTTTTTTTGTTCATCAGAATAAAGAAGCTCAAACAGATTTGGAATGAGTGAACATTGTGTAAATGATGAGAATTTTTAGTTTTGGATCAGTTTAAGGGATTAAACTGTTGCTAATGATAGTAATTATTTACAGTATTTATATAGAAACAGAGCAATAATCTGAGAATTGTCTTTTAGTGTTTAGTCTAGAAACTATTATTAGGATAAGGTTTGTTAATCCAGCATCTGCTATTACAATAAAATAAAATTTGTAACACAGGGAGTGATTCCGACCTCTCGGGTGAAGTTTCTGCTCCGTCTGCTGAGAGGTCGTCTGGAAGTGGATCTGGACAAAGACAAGCTTCTCTTTAAACACATGTGTTATGAGATGGAGCGTCTGCACAATGGAGGAGACGTCACCTTTCATGATGTACTGAG[G/A]TTAGAAAAGAAAAAGCCTGCTATTAATTCTAGCACATAATTTTACCTTTATAACGAATCAGACTACATAAGATCTACTGCGATAAGATCTTCTTACCCAGACAAAACAGCTAGCACTGAAAGGGTCATATTGTACCACCCTCACTGCTGTGTTGTTGATGTTCTGTGGCCCATATGAAGTCATGTATGATTGTGTGAATGTGTGTGTGTTTCAGCATGCTGTCGTATCGTTCAGTTGATATCCGCAAGAGTCTTCAGCTGGAGGAGCTGTTGGCAAGAGAGCAGCTTGAATACACTATAGAGGAGGAAGTGGCCAAACAAACCATCCGCATGTGGTTGAAGAAGTGCCTGAAACGCATCAGAGCCGTGAGTCCATACAAACACTCATCGTTCAATTCAGATGCTGGATGACTACAGAAGAGGATTAGCGCCTATCAATAATAATGATAAACAACCTTCTCAAGATTAATTGGCATTATAATGTGTGATTTGAAGAAAATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6116
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048469 Nonsense 1683 1742 43 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Nonsense 1658 1717 42 43
ENSDART00000142289 Nonsense 167 168 4 4
ENSDART00000145204 None None 409 None 13
Genomic Location (Zv9):
Chromosome 9 (position 32625545)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 31781491
GRCz11 9 31592237
KASP Assay ID:
554-3849.1 (used for ordering genotyping assays)
KASP Sequence:
TGAGCCCCACTCTGTCAGACCGCAGTGGATACAGACAGGACTCTGCTGAC[C/T]GACCCCAGAGGAAGCTGGGACAGTGGAGACTTCCTGCAGGTCTAAAGCTT
Long Flanking Sequence:
CTGATTTGAGCAGGAAATCCCAATTAGGTGCATTCAGTCTCCGATGTGAACAAAGTCAAAGCTCTAAAACAGATGCACAGATAGGATAGAATTGCTTAGCTGCAGTCGCTTTGCTTTTACTGCAGTAGAATCAGACTGGATGCTGATATTAGACATGCCAGATGAGCTGAATAAAAACATCCTTCTCTTCCAGAAACAGCAGCAGTCATGCAGCATCATCCTCAGTCTGAGAGAGAGTCAACAGCAAGACCTGCGGCGGCTGCTCAACCCCCCCAGCATCGAGACCACCGTCCCCAGCGAAGACACCAACACACACAACCAGGACAATCCCACCCAGCCTGAGGTAAACAGAGCAGTGCGTATGCTTCTGTGTGCTCTTTAGTGTGCTGAAGTGCTTTGAACGCATGTTTCTGGTTGTGTCCCAGCAGAACAGCGGCCTGCAGACGTTACTGAGCCCCACTCTGTCAGACCGCAGTGGATACAGACAGGACTCTGCTGAC[C/T]GACCCCAGAGGAAGCTGGGACAGTGGAGACTTCCTGCAGGTCTAAAGCTTTTATTCTTAAAAATGAGGCATAGACTGTACAGTATAAAGTGTACTATACTAAATAAAGATTGTTTGTAACAGCCATATCTCATTTATTTTTCCAAAAATTGTCTACAACAGTATGATTGCAAAATTAAATATTGCAATTTTTCAAATGAACATTGTCTAATGAATGCCATAGAAGTGTTGCTCTGATCTATGTAATTACAGTAATATTAAAGGTGCTATAGAATTTACTGATACAGGGTTCAGGGCTGAAGTAAGCATTTATTTAATATAAAAATATATAAATATCTGTATTTCATCATATATATATATATATATATATATATATATATATATATATATATATATTTATTTATATTAGTATTGTAGATTCCCAAAGTGTATACTTTAAATTTTATTGTTGTTTCTTCATTTAATACTTAAGTAAGCATGGGGATTTTGACCATTATACAG
Associated Phenotype:
Not determined