ZMP

pde6a

Ensembl ID:

ENSDARG00000000380

ZFIN ID:

ZDB-GENE-030616-42

Description:

rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha [Source:RefSeq peptide;Acc:NP_001007

Human Orthologue:

PDE6A

Human Description:

phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:HGNC Symbol;Acc:8785]

Mouse Orthologue:

Pde6a

Mouse Description:

phosphodiesterase 6A, cGMP-specific, rod, alpha Gene [Source:MGI Symbol;Acc:MGI:97524]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa35692	Nonsense	Mutation detected in F1 DNA	Not yet available
sa14581	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa35692

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > G

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000000392	Nonsense	24	858	1	22

Genomic Location (Zv9):

Chromosome 14 (position 26112057)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	24736756
GRCz11	14	25034001

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GTGGCTGAGAAGTTTTTGGACAGTAATCCAATGTTTGCCAAGCAATACTA[T/G]GACTCCAGGTTCCGGGCGAAGGTCGTCTCTGACCTTCTTTCGACCACTAA

Long Flanking Sequence:

GATACAGTATACCATGCACAGAATCTTAAAGCTTTGACCCAAGCTTGGCATACATCCGAATTTATTTGAAGAAGAAATCCCTTTTGTTGGAGACTTAGCTTTGTACCTTTGCAAAGCTTACATGAATATACATAACAAGCTACAACAAAATTAAAGCATTACATAGCCGCCATATGGCCTAAAATGGCTCATTTTCCAGATGTTCTAATTGCGTCAACAAACGCTTATGTATTCTAGCTGCGACTGCTCTCAGGTAAATGTCATAATCCTAATTACAATTGGACACAGGATTATGAGCACACTCAGACGCCTCTTTAAAACAATCTCTATTAATCCCTCAGTGTTTCTCAGTGTCCTGCTGCATAGGACAACTGTGACCCCACATAGAAAACCCATTCAAGTGTTAAACTTCACTACAGCTTTGGAGAAATGGCTGCAGTGGACAAGGATGTGGCTGAGAAGTTTTTGGACAGTAATCCAATGTTTGCCAAGCAATACTA[T/G]GACTCCAGGTTCCGGGCGAAGGTCGTCTCTGACCTTCTTTCGACCACTAAGCAAACCGCAGTGGACATCAGTTCTCACCATGAACTGAGCTCTATGGAGGAGTGTGAGATTATTTTTGACATGGTGCGGGACATGCAGGAGAACCTGCATATGGAGAGGGCCGTGTTTAACCTCATGCGGCATCTGAGCTTTATGATCCGGGCAGATCGCATGAGTCTCTTCATGTACCGCCAGAGGAATGGAATAGCCGAACTGGCCACACGAATCTTCAATGTCCATAAAGACGCTACCCTGGAGGAATGTCTGGTGCCACCAGACAGCGAGATTGTGTACCCGCTGGACACAGGCATTGTAGGACATGTGGCCACTGCTAAGAAGACTGTCAACGTACCTGATGTCACAAAGGTGGGATAAACCTTGATGCTTATAACATACTTTGTGTTTACTTTTAGAATCTCACAAAGAAGAACTAGTTTAAATATAGATTAAAAAAATCATTG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa14581

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000000392	Nonsense	70	858	1	22

Genomic Location (Zv9):

Chromosome 14 (position 26111921)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	24736620
GRCz11	14	25033865

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TGAGCTCTATGGAGGAGTGTGAGATTATTTTTGACATGGTGCGGGACATG[C/T]AGGAGAACCTGCATATGGAGAGRGCCGTGTTTAACCTCATGCGGCATCTG

Long Flanking Sequence:

AAGCTACAACAAAATTAAAGCATTACATAGCCGCCATATGGCCTAAAATGGCTCATTTTCCAGATGTTCTAATTGCGTCAACAAACGCTTATGTATTCTAGCTGCGACTGCTCTCAGGTAAATGTCATAATCCTAATTACAATTGGACACAGGATTATGAGCACACTCAGACGCCTCTTTAAAACAATCTCTATTAATCCCTCAGTGTTTCTCAGTGTCCTGCTGCATAGGACAACTGTGACCCCACATAGAAAACCCATTCAAGTGTTAAACTTCACTACAGCTTTGGAGAAATGGCTGCAGTGGACAAGGATGTGGCTGAGAAGTTTTTGGACAGTAATCCAATGTTTGCCAAGCAATACTATGACTCCAGGTTCCGGGCGAAGGTCGTCTCTGACCTTCTTTCGACCACTAAGCAAACCGCAGTGGACATCAGTTCTCACCATGAACTGAGCTCTATGGAGGAGTGTGAGATTATTTTTGACATGGTGCGGGACATG[C/T]AGGAGAACCTGCATATGGAGAGGGCCGTGTTTAACCTCATGCGGCATCTGAGCTTTATGATCCGGGCAGATCGCATGAGTCTCTTCATGTACCGCCAGAGGAATGGAATAGCCGAACTGGCCACACGAATCTTCAATGTCCATAAAGACGCTACCCTGGAGGAATGTCTGGTGCCACCAGACAGCGAGATTGTGTACCCGCTGGACACAGGCATTGTAGGACATGTGGCCACTGCTAAGAAGACTGTCAACGTACCTGATGTCACAAAGGTGGGATAAACCTTGATGCTTATAACATACTTTGTGTTTACTTTTAGAATCTCACAAAGAAGAACTAGTTTAAATATAGATTAAAAAAATCATTGTATGACAAGTTAGCCATGACTGTTAGCATGTGTTTTTTAAGTAATATATTAAAGTAATCAATGTTTCAGCGTTTTCCCTGAGATGGGTTGCGGCTGGAAGGGCATCCGCTGTGTAAAAACGTGCTGGATAAGTTGG

Associated Phenotype:

Not determined