ZMP
cacna1r
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate calcium channel, voltage-dependent, R type, alpha 1E subunit (CA
Human Orthologue:
CACNA1E
Human Description:
calcium channel, voltage-dependent, R type, alpha 1E subunit [Source:HGNC Symbol;Acc:1392]
Mouse Orthologue:
Cacna1e
Mouse Description:
calcium channel, voltage-dependent, R type, alpha 1E subunit Gene [Source:MGI Symbol;Acc:MGI:106217]
Alleles
There are 15 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa9991 | Nonsense | Available for shipment | Available now |
| sa31636 | Essential Splice Site | Available for shipment | Available now |
| sa846 | Essential Splice Site | Available for shipment | Available now |
| sa21228 | Essential Splice Site | Available for shipment | Available now |
| sa16705 | Nonsense | Available for shipment | Available now |
| sa21229 | Nonsense | Available for shipment | Available now |
| sa31637 | Nonsense | Available for shipment | Available now |
| sa17403 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa9991
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089971 | Nonsense | 452 | 2318 | 9 | 47 |
| ENSDART00000132899 | Nonsense | 376 | 741 | 8 | 18 |
| ENSDART00000139972 | None | None | 850 | None | 23 |
Genomic Location (Zv9):
Chromosome 8 (position 15290076)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 14735420 |
| GRCz11 | 8 | 14773125 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGAGCGAGAGCGGGTAGAGAACCGGAGAGCCTTCATGAARCTTAGGAGA[C/T]AGCAGCAGATTGAGAGGGAGCTGAACGGATATCGGGCCTGGATCKACCGT
Long Flanking Sequence:
AACTTTTATTTAATGTTTACAATGCAAATTCAAAAAGATCCACTTATTTGGTAAACAAAGCAAGTCTCTCATATAATAGATCTACTAAAAGACCGAAAATATAAATTTACAATCATTTACACGAGTAAATACATAGACTTAATGATGGTCAAATCTTTTTATAAAAACCCACAGGAAACTAATGAAGGAACCAACAGTGAACTAGTCTTTTTTATCTCATACTGTATACATTTCGAGTTTGTGTAAAAATCTGCTCACTGTGGAAGTCACAAGTTAGTGTAAATTCAGCTTTATTAAATCCTGTGAATTTAGAAGCATGAATTGCTCTCTCTGCCGTTAATTCCTTTACTCTGCAGGTGAAACACTTTGATAAATTAAGTGTGTCTCTTCCCTGCGGTTCATCTCTGTGTGGGTAATTGTATGTTGTTGTCTCCTGTAGGGAGTTTGCTAAAGAGCGAGAGCGGGTAGAGAACCGGAGAGCCTTCATGAAGCTTAGGAGA[C/T]AGCAGCAGATTGAGAGGGAGCTGAACGGATATCGGGCCTGGATCGACCGTGCAGGTACTCCTACATACTGAGCTGGCAAATGCACCATGCAAAACAAATAAAGTAAATCAAGTCTGTCAAAACACTGAAGCACAGAATTGCTCAAACTGCAGGAGATGACGAGTGCTGTTCGAAAAAGGCACATAGCAAATTTCATAGCAAATCATCTGAATAGCAACTCAAATGAAAACTTGGGAAATTATATATATATATATATATATATATATATATATATATATATATATATATTCTTTTTTTTCAACACATTTCTAAACATAATAGTTTTAATAACTAATTTCTAATAACTGATTTATTTTATCTTTGCTGTGATGACAGTAAATAATATTTTACTAGATATTTTAAAGACACTTTTATACAGCTTAAAGTGACATTAAAAGGCTTACTGTACCAGAGAACACTAATACACTGTTTACTGCCATTTGGCTACACATACATTTGAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31636
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089971 | Essential Splice Site | 707 | 2318 | 15 | 47 |
| ENSDART00000132899 | Essential Splice Site | 631 | 741 | 14 | 18 |
| ENSDART00000139972 | None | None | 850 | None | 23 |
Genomic Location (Zv9):
Chromosome 8 (position 15296490)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 14741834 |
| GRCz11 | 8 | 14779539 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCTTTATTGTGGTCTTTGCACTTCTGGGCATGCAGCTCTTTGGTGGAAG[G/A]TAAGAGCTTATCAGTCTGAGTGCATACAATGCCTGTAGACATAGATTTCA
Long Flanking Sequence:
TTCGTTCATTCATTGGTTCGTTGGTTCAGTCATTCACAGTCACATTTCCTGTTGTTCATACATCATGCATTTGGATCATGTTTTCAATGCTGTGAAATTGCTTAATTCCTTTCTAGGTTATAGTAGGCAGCATCTTTGAGGTGTTCTGGGGCTTCTTCAGACCTGGCACATCCTTTGGGATCAGCGTTCTTCGTGCCTTGCGGTTGTTGAGAATTTTCAAGATAACCAAGTAAGTGCAGGCTTGCTTGGTATAACGGCCTCTTGGGTTTGTTTGCCTCTTACAGAGCCAATAATCTGTTTATTGACTTCTGCTCGGTTCTGTATGTCCTCATGCTGAACTCAGAGATGCTGCATTTTGTCTTGTTAAGATACTGGGCGTCCCTGAGGAACCTGGTCGTGTCTCTGATGAACTCAATGAAGTCTATTATCAGTTTGCTCTTCCTGCTTTTTCTCTTTATTGTGGTCTTTGCACTTCTGGGCATGCAGCTCTTTGGTGGAAG[G/A]TAAGAGCTTATCAGTCTGAGTGCATACAATGCCTGTAGACATAGATTTCAATTTGAATTTATGACTGAACATTGCTGTAGTTAGGGCTGCGCAATATGGCGATGTATATCATGTGGATAAAAAAGTTTATTGTTTTATGTTATGCTCAATAATTTATTTTGTGGTTTCATAAAATACATAGTTAACGGGAATACTTTTTCAAAATGTATATGAGCCCAATATTACACTATTATTGGGATGCATACAGTTACAGGAGTAACAGCATCGTGAGAAAGTTTCAATCTTGAATAAACAATGTTTAAATTTTGCATTTTATTTGGCAATATGTTTTTGTTATTATGATAAACATAAAAACTATATTTTATGAAACAATATGTGTTTATTATTTATTTCAAATTTAGACATTTTGAATCAAACATTTGCACTCAAGTTCTAAATAAAGTATGAAAGATGATCACATATGAGTTTAAAATGTTAAAAAGAAATATGCAATATATAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa846
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089971 | Essential Splice Site | 1683 | 2318 | 34 | 47 |
| ENSDART00000132899 | None | None | 741 | None | 18 |
| ENSDART00000139972 | Essential Splice Site | 525 | 850 | 14 | 23 |
Genomic Location (Zv9):
Chromosome 8 (position 15325029)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 14770373 |
| GRCz11 | 8 | 14808078 |
KASP Assay ID:
554-0749.1 (used for ordering genotyping assays)
KASP Sequence:
GGGCTACACCATCCGTATTCTGCTCTGGACTTTTGTTCAGTCCTTCAAGG[T/G]CAGACATGTCTTGCGCTGCACTAGATTGAAATCCCTTATTCTTCTTTTTA
Long Flanking Sequence:
ATCTTTCAGAACTATTTCAGAGACACATGGAATATATTTGACTTCATCACGGTTCTAGGAAGCATCACAGAAATTCTGGTGGACAAATTTCAGACTGGAAAAGTGAGAACTAAATTACATTTGTGTGTTCTTTGTAGTCAGAGTTGATATTCATAAGGAACTAAGTATGTATTGTGATTGATTTGCAAACAGAAGTCATTTACATGGACAATCACATCTGTATAATAATTGCTATTTAGCTGGTGTGTATTTGCATGAGCTTCATGGTGTTGATTAATATGTGCAGAGTATTTATTTGCAGAAGCAATGACCTTTGTATTTTGATTGGTGTGTCTGCAATATTTATTTGCATAAGCAGTCATCTCTGTGCTCTCATTGGTATTTGCAGACTTTTAATATGGGCTTCCTGAAGCTATTCCGGGCAGCTCGGCTGATTAAACTCCTGCGTCAGGGCTACACCATCCGTATTCTGCTCTGGACTTTTGTTCAGTCCTTCAAGG[T/G]CAGACATGTCTTGCGCTGCACTAGATTGAAATCCCTTATTCTTCTTTTTATCCTTATTCTTCCAAATGCAGTTTTTGCTTTTATTCAACACAAAACAGAAATTCAGATTTTAATGCTGCGTTTGCAAGACACTCAACACAAAACATGAAACAATATTTCACTAAATGTTGCATCACTCCAAGATTAAACCAATGGATCACCCAGTTTCCAATCCTCCACAAGAAAAATGAGCATTAAGAATGAATAGAGACAACATTACACTACCTGACAAAAGTCTTGTCGCCTATAAAAGTTTTAGGAAAAACAAATAATAACTTTACTTCTAGTTGACCATTTGGTATCAGAAGTGACTTATATGATATACACAGGCCTCTAGATTACGCTTATTTTACCAAAATAAAATATGATCATGCCTTGATTTTTAATTATTTAGGACAGTAAGGTCTGACTTTTTTTAGACAAAAGTCCTGTCACTTAACAGCAATAATGTACAGTTAAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21228
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089971 | Essential Splice Site | 1835 | 2318 | 38 | 47 |
| ENSDART00000132899 | None | None | 741 | None | 18 |
| ENSDART00000139972 | Essential Splice Site | 677 | 850 | 18 | 23 |
Genomic Location (Zv9):
Chromosome 8 (position 15327524)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 14772868 |
| GRCz11 | 8 | 14810573 |
KASP Assay ID:
2260-0301.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTTAGATGAGTTTGTACGGATCTGGGGAGAGTATGACCGTGCTGCATGG[T/A]AAGAGATGCAGCTTTATACCCTTTCTGTTTATGATGCATAATAAAAGAAC
Long Flanking Sequence:
GGGATTGATGAATGTGATTTAATTTCTGATATACATATGTATGTGTATGTGTGTGTGTGTGTTTGTGTTAAGGAGTGCAACAGGTGAATCATGGCAGGAAATCATGCTATCGTGTTTAGGAGAGAAGGAGTGTGAAATTGACACTTCTGTCAACTCAACAACAAAGACAATAAAAAACGACTGCGGTACCGACTTTGCCTACTTCTACTTTGTCTCCTTCATCTTCTTCAGTTCTTTTCTGGTGAGAGGCAACACATACTGTATTTAATGACACAAACACACATTTCTACAAATCTTTACACTTAAAGACCACACACTTAAGGTCTATTCATACCAAATCCGGTTTATTCACTGAACTTTGTCTTTTTCAGATGCTGAATCTGTTTGTGGCTGTGATCATGGATAATTTTGAGTACCTGACACGTGACTCATCCATTCTGGGTCCTCACCACTTAGATGAGTTTGTACGGATCTGGGGAGAGTATGACCGTGCTGCATGG[T/A]AAGAGATGCAGCTTTATACCCTTTCTGTTTATGATGCATAATAAAAGAACATAATTTATGCTATAATGAATTGTATTCTGGAACGATATTGTGTTATATAACTGTATACATATTAATGCATAAACAAACAATAGTTTATTTACTGTGTGTTTATATAAGTATGCCACATGTATGCTATTTATGAGATGTACATGTTAAAATGCTTTGTAATTGTCAGTTATGTTTAATATGTTTACCAATTTTAAATCCTTTAGGATGACTTCAAAGGGGTCATGTCATAAAGAACAAATTTTTGTAAAGTTTTAAAATTTAATAAGTAGTAGAAAATAATCAGTTTAAGACATCTTACTTCGCTTACTGGTAATTAAATGGAGAAATTGATAGTTTAAATATAGAAAATAGCATTCGTTCTCCTAATTAATGATAAATTAATAATTCAAATGATTTATTCAAATTAGAGGTTTCATTGAGAAACAAATGAGTATAGAATGGATCTTTGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16705
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089971 | Nonsense | 1913 | 2318 | 41 | 47 |
| ENSDART00000132899 | None | None | 741 | None | 18 |
| ENSDART00000139972 | Nonsense | 755 | 850 | 21 | 23 |
Genomic Location (Zv9):
Chromosome 8 (position 15334730)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 14780074 |
| GRCz11 | 8 | 14817779 |
KASP Assay ID:
2260-0302.1 (used for ordering genotyping assays)
KASP Sequence:
AAAATGAKCATTGTTTAATAGGAGGGGAAGACAGGGGTCAGATGGATGTT[G/T]AACTGCAGAAGGAAATCAGTGTCATCTGGCCGCATCTCTCACAGAAATCT
Long Flanking Sequence:
CATGCAAGTCTTAATACAGAGTTTTTAAAACAATTACAGACAAATTACAAAGGGCATGTTCATAAAGTGTGATCCGTCAAACTTTCCCAGTTTCTAATCTGTCCCTCTCCAATATATGTGTTTCAACTGTGTGCATGAATCGTGATATTGTGACATCTTCTTTGTGTAAAAGTTGATAACTTAGAAAACCTAGATGTCTAGCGTTTTAAAAATCATGCACAGCCACTGTTTAGTTTTGCGGTTCTTGTATTTCATTTGTCTTTTGTCTTTATGGCGATCTGCTTTTAGCGGTTGGTTCTGATGAACATGCCAGTGGATGAAGACATGTCTGTCCACTTCACCTCCACACTTATGGCCCTCATACGCACCGCACTGGACATTAAAATTGCTCGAGGTTGGCATCACTCATTTATTTCTTTGTCTATAAATAAAAAACACAATAATATTAGCAAAATGATCATTGTTTAATAGGAGGGGAAGACAGGGGTCAGATGGATGTT[G/T]AACTGCAGAAGGAAATCAGTGTCATCTGGCCGCATCTCTCACAGAAATCTCTTGATCTGCTTGTACCCATTCACAAAGGTAAGAGATTGGAGTATGGCAGATTTTGATTTTTTAAAGGGATAGTCATCATTTATTCGTCGTTCATTTATTACAAAACTTTTTTTTTTTTTTAACTTTGTTCTTCAGTTGAACAGAAAGGAAGATATTTCAGTGAAAACTGGAGACCTATAACCATTCACTTCCATAGTGTTTGTTTTTCTTACTATAGAAGTCAATAGTTACAGGTTTTGAGCTTTCTTCAAAATATCTTCTTTTGTTTCCAACAGTAGAAAGAAACTCATAGGTTTGAAACCACATGGGAGAGAATAAATAGTGAATGCATTTTCATTTGGATGAACTATCACTGTTATTGTTGTACCAGTGTTGTCCACTAGGGATACCACTGACGTCCCTAAATGTAAATGTGTTTTGCAGCCTGGATAAAAATTCATTTACTACAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21229
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089971 | Nonsense | 1948 | 2318 | 42 | 47 |
| ENSDART00000132899 | None | None | 741 | None | 18 |
| ENSDART00000139972 | Nonsense | 790 | 850 | 22 | 23 |
Genomic Location (Zv9):
Chromosome 8 (position 15335280)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 14780624 |
| GRCz11 | 8 | 14818329 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAAAACAACTCTTTTTTCCAGCTAGTGACATGACCATTGGGAAGATCTA[T/A]GCAGCCATGATGATCATGGACTACTACAAGCAGAACAAAGCCAAGAAGCT
Long Flanking Sequence:
TCTTGATCTGCTTGTACCCATTCACAAAGGTAAGAGATTGGAGTATGGCAGATTTTGATTTTTTAAAGGGATAGTCATCATTTATTCGTCGTTCATTTATTACAAAACTTTTTTTTTTTTTTAACTTTGTTCTTCAGTTGAACAGAAAGGAAGATATTTCAGTGAAAACTGGAGACCTATAACCATTCACTTCCATAGTGTTTGTTTTTCTTACTATAGAAGTCAATAGTTACAGGTTTTGAGCTTTCTTCAAAATATCTTCTTTTGTTTCCAACAGTAGAAAGAAACTCATAGGTTTGAAACCACATGGGAGAGAATAAATAGTGAATGCATTTTCATTTGGATGAACTATCACTGTTATTGTTGTACCAGTGTTGTCCACTAGGGATACCACTGACGTCCCTAAATGTAAATGTGTTTTGCAGCCTGGATAAAAATTCATTTACTACAAAAAAACAACTCTTTTTTCCAGCTAGTGACATGACCATTGGGAAGATCTA[T/A]GCAGCCATGATGATCATGGACTACTACAAGCAGAACAAAGCCAAGAAGCTCCGTCAGCAGCTCGAGGAACAGGTAGAGACATGTTAACTTCTGCAGCACTGGTGACTAAAACTTAAGATATATGAAGCTTGAGAGCTAAAAACAGGTCAATTTACAACCTCAGGTTTATTAATTATGCTTGTTATTCTAGCGTATAACTGTATGCAATAGTATTAATTTCAGTAAAGACACGTTAACGAATCCTTATATATCATTGTGCATTTCCTGTGGTTTGTTTTAATGGGTACTGGGTCATTGTGCCACTGGTGAGGTTTTGCTGACCATCTGATATTGTCTTGCAGAAACACGCACCAATGTTCCAACGCATGGATGCATCCTCGCTGCCGCAGGACATCCTCTGCAGTGCCAAGGCTTTGCCATTCCTGACTCACAGTGCAGGATCTGCCCTGTAATTGTATATGTTGTGTGTTTGCGTGTGTGCTTACATTGGCCCTGAATAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31637
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089971 | Nonsense | 1961 | 2318 | 42 | 47 |
| ENSDART00000132899 | None | None | 741 | None | 18 |
| ENSDART00000139972 | Nonsense | 803 | 850 | 22 | 23 |
Genomic Location (Zv9):
Chromosome 8 (position 15335317)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 14780661 |
| GRCz11 | 8 | 14818366 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGGGAAGATCTATGCAGCCATGATGATCATGGACTACTACAAGCAGAAC[A/T]AAGCCAAGAAGCTCCGTCAGCAGCTCGAGGAACAGGTAGAGACATGTTAA
Long Flanking Sequence:
TTGGAGTATGGCAGATTTTGATTTTTTAAAGGGATAGTCATCATTTATTCGTCGTTCATTTATTACAAAACTTTTTTTTTTTTTTAACTTTGTTCTTCAGTTGAACAGAAAGGAAGATATTTCAGTGAAAACTGGAGACCTATAACCATTCACTTCCATAGTGTTTGTTTTTCTTACTATAGAAGTCAATAGTTACAGGTTTTGAGCTTTCTTCAAAATATCTTCTTTTGTTTCCAACAGTAGAAAGAAACTCATAGGTTTGAAACCACATGGGAGAGAATAAATAGTGAATGCATTTTCATTTGGATGAACTATCACTGTTATTGTTGTACCAGTGTTGTCCACTAGGGATACCACTGACGTCCCTAAATGTAAATGTGTTTTGCAGCCTGGATAAAAATTCATTTACTACAAAAAAACAACTCTTTTTTCCAGCTAGTGACATGACCATTGGGAAGATCTATGCAGCCATGATGATCATGGACTACTACAAGCAGAAC[A/T]AAGCCAAGAAGCTCCGTCAGCAGCTCGAGGAACAGGTAGAGACATGTTAACTTCTGCAGCACTGGTGACTAAAACTTAAGATATATGAAGCTTGAGAGCTAAAAACAGGTCAATTTACAACCTCAGGTTTATTAATTATGCTTGTTATTCTAGCGTATAACTGTATGCAATAGTATTAATTTCAGTAAAGACACGTTAACGAATCCTTATATATCATTGTGCATTTCCTGTGGTTTGTTTTAATGGGTACTGGGTCATTGTGCCACTGGTGAGGTTTTGCTGACCATCTGATATTGTCTTGCAGAAACACGCACCAATGTTCCAACGCATGGATGCATCCTCGCTGCCGCAGGACATCCTCTGCAGTGCCAAGGCTTTGCCATTCCTGACTCACAGTGCAGGATCTGCCCTGTAATTGTATATGTTGTGTGTTTGCGTGTGTGCTTACATTGGCCCTGAATAATGTGCATCACAGCAACAGCATCAGTCCTGATAACTGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17403
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089971 | Nonsense | 1985 | 2318 | 43 | 47 |
| ENSDART00000132899 | None | None | 741 | None | 18 |
| ENSDART00000139972 | Nonsense | 827 | 850 | 23 | 23 |
Genomic Location (Zv9):
Chromosome 8 (position 15335659)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 14781003 |
| GRCz11 | 8 | 14818708 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATTGWCTTGCAGAAWCACGCACCAATGTTCCAACGCATGGATGCATCCT[C/A]GCTGCCGCAGGAMATCCTCTGCAGTGCCAAGGCTTTGCCATTCCTGACYC
Long Flanking Sequence:
CACTAGGGATACCACTGACGTCCCTAAATGTAAATGTGTTTTGCAGCCTGGATAAAAATTCATTTACTACAAAAAAACAACTCTTTTTTCCAGCTAGTGACATGACCATTGGGAAGATCTATGCAGCCATGATGATCATGGACTACTACAAGCAGAACAAAGCCAAGAAGCTCCGTCAGCAGCTCGAGGAACAGGTAGAGACATGTTAACTTCTGCAGCACTGGTGACTAAAACTTAAGATATATGAAGCTTGAGAGCTAAAAACAGGTCAATTTACAACCTCAGGTTTATTAATTATGCTTGTTATTCTAGCGTATAACTGTATGCAATAGTATTAATTTCAGTAAAGACACGTTAACGAATCCTTATATATCATTGTGCATTTCCTGTGGTTTGTTTTAATGGGTACTGGGTCATTGTGCCACTGGTGAGGTTTTGCTGACCATCTGATATTGTCTTGCAGAAACACGCACCAATGTTCCAACGCATGGATGCATCCT[C/A]GCTGCCGCAGGACATCCTCTGCAGTGCCAAGGCTTTGCCATTCCTGACTCACAGTGCAGGATCTGCCCTGTAATTGTATATGTTGTGTGTTTGCGTGTGTGCTTACATTGGCCCTGAATAATGTGCATCACAGCAACAGCATCAGTCCTGATAACTGCCAAAGCATTAATTGATAAATAAATATTTATTAAAGGATTATAACTTTTTAAATTCTAAAATTGTTAAATGCTTTAACAAAACAAGCTTCTTTACAAAATGTGACTGTTGTTTTTTTTATTTAACTATTCATTATACACTTTTAGATAGGTCAATGATCAGAAATGACATTATGTGACAAAATAAAAACTTTTTAAAAAATAAAAATCCTTACAAAATAAAAACTATTTTATAAGGATTCACAAGGGTTAATATTTTGAATGATTTTTTAAATGTTTCTTTTTGTTTGTTTGTTTTTAATATCTTAATTGTTTTTTTTTCTTTACTTTTTGCTATTTTTAGTT
Associated Phenotype:
Not determined