ZMP
chsy1
Ensembl ID:
ZFIN ID:
Description:
chondroitin sulfate synthase 1 [Source:RefSeq peptide;Acc:NP_997843]
Human Orthologue:
CHSY1
Human Description:
chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:17198]
Mouse Orthologue:
Chsy1
Mouse Description:
chondroitin sulfate synthase 1 Gene [Source:MGI Symbol;Acc:MGI:2681120]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa9893 | Nonsense | Available for shipment | Available now |
| sa40837 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa9893
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000104536 | Nonsense | 381 | 801 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 7 (position 10289537)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 9263318 |
| GRCz11 | 7 | 9508805 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCCCACCAACGTGAGGAGGTGCTGGAATGGGAATTCCTCACGGGAAAGTA[C/A]ATTTTCTCATCCTCAGATGGACAGCCTCCCCGTCGAGGCATTGACTCCTC
Long Flanking Sequence:
AATTGCTTGTTTGCATTACAGTTTGGCCCTTTAATTGGAAAATAAGACGCGAGAGGTCTTGCTAAAGACGTATTATTTTCACTTTCAATTATATCAACCCAGTTGTGACGTCAATCTATTATTTACAAGTCTAAACCAATCACTAACATCTAGTTTTCTCTTTTACAGATGCAGCAGCTGTTCTATGAGAATTACGAGCCAAACAAGAAGGGCTACATCCGTGATCTCCACAACAGTAAGATCCACAGAGCCATAACCCTTCACCCCAACAAGAACCCACCTTACCAGTATCGGTTGCACAGCTACATGTTGAGCCGGAAGATTGCAGAGCTGCGCCACCGCACCATTCAGCTCCATCGTGAGATTGTGCAAATGAGCCGCTACAGCAACACCGAGGTGCACAGGGAAGACCTTCAACTGGGCATGCCTCCATCCTTCATGCGCTTTCATCCCCACCAACGTGAGGAGGTGCTGGAATGGGAATTCCTCACGGGAAAGTA[C/A]ATTTTCTCATCCTCAGATGGACAGCCTCCCCGTCGAGGCATTGACTCCTCGCAGAAGATGGCGCTGGACGACATCATCATGCAAGTTATGGAGATGATTAACGCCAATGCCAAGACACGCGGAAGAGTCATTGACTTCAAAGAGATCCAATATGGCTACCGAAGGGTCAACCCTATGTATGGTGCAGAGTACGTACTGGATCTGCTGCTGCTCTACAAGAAGCACAAGGGGAAGACTATGACAGTGCCCGTAAGGAGGCATGCGTATCTTCAGCAGACCTTCAGCAAGATCCAGTTCTTGGAAGAAGAAGAGATGGACGCTCGAGTCCTGGCTGCCAGGATCAACCAAGACTCCGACTCGCTGTCTTTCTTGTCCAACTCCCTCAAGATGCTCGTCCCGTTCAAGTTGAGCAGCCCAGGCATCGAACAACACGAACCCAAAGAGAAGAAGATCAACATCCTTGTGCCGCTGGCCGGACGCTACGAGATTTTTCTGCGCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40837
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000104536 | Nonsense | 389 | 801 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 7 (position 10289559)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 9263340 |
| GRCz11 | 7 | 9508827 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGAATGGGAATTCCTCACGGGAAAGTACATTTTCTCATCCTCAGATGGA[C/T]AGCCTCCCCGTCGAGGCATTGACTCCTCGCAGAAGATGGCGCTGGACGAC
Long Flanking Sequence:
TTGGCCCTTTAATTGGAAAATAAGACGCGAGAGGTCTTGCTAAAGACGTATTATTTTCACTTTCAATTATATCAACCCAGTTGTGACGTCAATCTATTATTTACAAGTCTAAACCAATCACTAACATCTAGTTTTCTCTTTTACAGATGCAGCAGCTGTTCTATGAGAATTACGAGCCAAACAAGAAGGGCTACATCCGTGATCTCCACAACAGTAAGATCCACAGAGCCATAACCCTTCACCCCAACAAGAACCCACCTTACCAGTATCGGTTGCACAGCTACATGTTGAGCCGGAAGATTGCAGAGCTGCGCCACCGCACCATTCAGCTCCATCGTGAGATTGTGCAAATGAGCCGCTACAGCAACACCGAGGTGCACAGGGAAGACCTTCAACTGGGCATGCCTCCATCCTTCATGCGCTTTCATCCCCACCAACGTGAGGAGGTGCTGGAATGGGAATTCCTCACGGGAAAGTACATTTTCTCATCCTCAGATGGA[C/T]AGCCTCCCCGTCGAGGCATTGACTCCTCGCAGAAGATGGCGCTGGACGACATCATCATGCAAGTTATGGAGATGATTAACGCCAATGCCAAGACACGCGGAAGAGTCATTGACTTCAAAGAGATCCAATATGGCTACCGAAGGGTCAACCCTATGTATGGTGCAGAGTACGTACTGGATCTGCTGCTGCTCTACAAGAAGCACAAGGGGAAGACTATGACAGTGCCCGTAAGGAGGCATGCGTATCTTCAGCAGACCTTCAGCAAGATCCAGTTCTTGGAAGAAGAAGAGATGGACGCTCGAGTCCTGGCTGCCAGGATCAACCAAGACTCCGACTCGCTGTCTTTCTTGTCCAACTCCCTCAAGATGCTCGTCCCGTTCAAGTTGAGCAGCCCAGGCATCGAACAACACGAACCCAAAGAGAAGAAGATCAACATCCTTGTGCCGCTGGCCGGACGCTACGAGATTTTTCTGCGCTTCATGGCCAACTTCGAGAAGATC
Associated Phenotype:
Not determined