Busch Lab

ZMP

clca1

Ensembl ID:
ENSDARG00000016290
ZFIN ID:
ZDB-GENE-030131-6221
Human Orthologues:
CLCA1, CLCA2, CLCA4
Human Descriptions:
chloride channel accessory 1 [Source:HGNC Symbol;Acc:2015]
chloride channel accessory 2 [Source:HGNC Symbol;Acc:2016]
chloride channel accessory 4 [Source:HGNC Symbol;Acc:2018]
Mouse Orthologues:
AI747448, Clca1, Clca2, Clca3, Clca4, Clca5, Clca6, Gm6289
Mouse Descriptions:
chloride channel calcium activated 1 Gene [Source:MGI Symbol;Acc:MGI:1316732]
chloride channel calcium activated 2 Gene [Source:MGI Symbol;Acc:MGI:1931471]
chloride channel calcium activated 3 Gene [Source:MGI Symbol;Acc:MGI:1346342]
chloride channel calcium activated 4 Gene [Source:MGI Symbol;Acc:MGI:2181989]
chloride channel calcium activated 5 Gene [Source:MGI Symbol;Acc:MGI:2139758]
chloride channel calcium activated 6 Gene [Source:MGI Symbol;Acc:MGI:2139744]
expressed sequence AI747448 Gene [Source:MGI Symbol;Acc:MGI:2139790]
predicted gene 6289 Gene [Source:MGI Symbol;Acc:MGI:3643218]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa9888 Essential Splice Site Available for shipment Available now
sa1839 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa9888
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000047531 Essential Splice Site 390 908 7 14
Genomic Location (Zv9):
Chromosome 15 (position 14145977)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 14177025
GRCz11 15 14112982
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
YTCCAGRTGGATMCACAAACATGTGTAATGGCCTTCGTCTAGGCTTACAG[G/A]TACCRAATGAATTGWTRATTTTATGWTTGTAGKGCAGGNATTACAGTGNNTT
Long Flanking Sequence:
AAGATGCACTGTCGTTTCTACCACCACTGCCATCGACTCCATCGCCGCCAATATTTAAACTTTTGCAGCGGAAGAAACGGGCTGTTTGTCTCATCCTTGATGTCTCAGGAAGCATGGCAACAGTATGAACACATAAAAAAAAATAATATATATATAAAAAATAAATAATAAATAATATATATATATTGCATTTTGCTAACCTACACACTGAATATCAATGCTCTGAGATGAAATGAAGAAAAAAGAAACACAAATTGTTTTTAACCCTTCTTTAGGAATCTAGAATTCTTCGCATGAGGCAGGCGGCCACACATTTACTGCGGAACTATGTTGAGGAACAGGCCAGTGTTGGAATTGTAAAATTCAGTACTGCAGCTTCTATTGTGAGCTCATTGACTATTATTGAGAGTGATGCCACAAGAGATCATCTCATTAACTTGTTGCCCGAAACTCCAGGTGGATCCACAAACATGTGTAATGGCCTTCGTCTAGGCTTACAG[G/A]TACCAAATGAATTGATGATTTTATGTTTGTAGTGCAGGAATTACAGTGTTTTTTGTGCTAATGCTTTCTGTTTTCCTCAAAACCTTCAGGTACTTTCAGAAGACGACATGGATGCAATAGGAGATGAAATAATTTTTCTGACAGATGGTCAGGCAACAGACGACGTTACATTGTGTATTCCGGATGCAATAAACAGTGGTGCTATTATACACACAATAGCTTTAAGTGACAGTGCACATAATGCATTGCAAGAGATGGCAGACAAAACTGGTAACAAAGTTGTATAATTACAGTAAATTAATTTGTATTACATTAATAGCAGTTTATTTTTTTTAATGCAAAATTTTATATTTTATAAAAATAGGTGGAATATTTTTCTATTCCAAAGATGATTTTACCTCCAACCAATTAATGGATGCATTTGCTTCACTTACATTATCCACTGGAGATCATTCAAATGAACCTGTTCAGGTATGTACAAGTAATCTGTCATTGCTCAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1839
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000047531 Essential Splice Site 391 908 8 14
Genomic Location (Zv9):
Chromosome 15 (position 14146065)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 14177113
GRCz11 15 14113070
KASP Assay ID:
554-1830.1 (used for ordering genotyping assays)
KASP Sequence:
GAATTACAGTGTTTTTTGTGCTAATGCNTTTCTGTTTTCCTCAAAACCTTC[A/T]GGTACTTTCAGAAGACGACATGGATGCAATAGGAGATGAAATAATTTTTC
Long Flanking Sequence:
TCTCATCCTTGATGTCTCAGGAAGCATGGCAACAGTATGAACACATAAAAAAAAATAATATATATATAAAAAATAAATAATAAATAATATATATATATTGCATTTTGCTAACCTACACACTGAATATCAATGCTCTGAGATGAAATGAAGAAAAAAGAAACACAAATTGTTTTTAACCCTTCTTTAGGAATCTAGAATTCTTCGCATGAGGCAGGCGGCCACACATTTACTGCGGAACTATGTTGAGGAACAGGCCAGTGTTGGAATTGTAAAATTCAGTACTGCAGCTTCTATTGTGAGCTCATTGACTATTATTGAGAGTGATGCCACAAGAGATCATCTCATTAACTTGTTGCCCGAAACTCCAGGTGGATCCACAAACATGTGTAATGGCCTTCGTCTAGGCTTACAGGTACCAAATGAATTGATGATTTTATGTTTGTAGTGCAGGAATTACAGTGTTTTTTGTGCTAATGCTTTCTGTTTTCCTCAAAACCTTC[A/T]GGTACTTTCAGAAGACGACATGGATGCAATAGGAGATGAAATAATTTTTCTGACAGATGGTCAGGCAACAGACGACGTTACATTGTGTATTCCGGATGCAATAAACAGTGGTGCTATTATACACACAATAGCTTTAAGTGACAGTGCACATAATGCATTGCAAGAGATGGCAGACAAAACTGGTAACAAAGTTGTATAATTACAGTAAATTAATTTGTATTACATTAATAGCAGTTTATTTTTTTTAATGCAAAATTTTATATTTTATAAAAATAGGTGGAATATTTTTCTATTCCAAAGATGATTTTACCTCCAACCAATTAATGGATGCATTTGCTTCACTTACATTATCCACTGGAGATCATTCAAATGAACCTGTTCAGGTATGTACAAGTAATCTGTCATTGCTCATGATATATTTATCACTCTGTCATTGATATTCTAAGTATATGTAGTATACATTTTTTTTATATCTCATTTTCATCATTCCTTTAGCTTGA
Associated Phenotype:
Not determined