ZMP
rapsn
Ensembl ID:
ZFIN ID:
Description:
43 kDa receptor-associated protein of the synapse [Source:RefSeq peptide;Acc:NP_840090]
Human Orthologue:
RAPSN
Human Description:
receptor-associated protein of the synapse [Source:HGNC Symbol;Acc:9863]
Mouse Orthologue:
Rapsn
Mouse Description:
receptor-associated protein of the synapse Gene [Source:MGI Symbol;Acc:MGI:99422]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa6513 | Nonsense | Confirmed mutation in F2 line | Not yet available |
| sa985 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa6513
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000060295 | Nonsense | 33 | 412 | 1 | 8 |
| ENSDART00000127110 | Nonsense | 44 | 423 | 1 | 8 |
Genomic Location (Zv9):
Chromosome 18 (position 20275293)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 20505516 |
| GRCz11 | 18 | 20494582 |
KASP Assay ID:
554-4697.1 (used for ordering genotyping assays)
KASP Sequence:
CTACCAGTCTAATGACACAGAAAAGGCTTTATATGTTTGGATGAAAGTGT[T/A]AAGGAAGACATCTGATCCTGGGGGGAAGTTTCGGGTTTTGGGRTGTCTGA
Long Flanking Sequence:
AGATATTCTGGGAGTTCATTGCCAGCACCTTGGATTGGGACTTATTCCTTTAGCGTCAATTTTTTTTCGTTCGAGGGGACTAAGATTGGGTCTTTAACATCACAAGATCATGGTATTGTGATTCTTATGAAGTTCTTTTAAAGTGATCAGCAATGGAGATCTGGACTCTGAAGACCTTGCAAGCTGTAGATCCAGTTTCCTCAACTACTCTTTACACCCAAAGTTGAGAGTTGTGGAGCAGTGACGCAAGAGGGAGAGGATCTCTGGGGTGGATTTTGGCTAACGCGTCTTTTGTTTTGGTGCACTGGTAGTTAAAGACACAAAAGAAAGGTACGCTTGCACTTCCCCAGAGGGCCGAAGAGCCAGACGGATGGTTATTTTTATGAGGGACTTTGTAGCAGAAATGGGTCAGGACCAAACCAAACAGCAGATTGAGAAGGGACTGAAGCTCTACCAGTCTAATGACACAGAAAAGGCTTTATATGTTTGGATGAAAGTGT[T/A]AAGGAAGACATCTGATCCTGGGGGGAAGTTTCGGGTTTTGGGGTGTCTGATAACAGCACATTCGGAAATGGGAAAATACAAGGAGATGCTACAGGTATGAGCCACTTTTCTTCTGCTTTCTTACTGTATTTATTTGTGTCAACACTAATGAGCATTTCAGATTTGTTTTCCACTATTATCAAAGACAATCAACAGTGGACCTACCCTGACTTGCAAGTTGCATTGTGCCAATAAAAATCATTTTTTCAAAAGTCATACACAAACAATTCTTATGCATTTCAATGCAAATTTCATAAACATATGGACAAACTCGGCCATTGGGTTAAAGTTGGACAATAAATGTACCTTAAATTTGTAACCCAGCAGTTGTCCATATTTTAGCCAGGTGTTGGTTGAAATAACCCAGCATTTTTAAAATGACTAAATGCACCAAAGACATGGCTTGCACTAATTTGCTGGTAACCCCAGGGATGCAGATTTCTGACCTACTGAAATATGTA
Associated Phenotype:
This allele has been associated with this phenotype by genetic linkage analysis and may not be causal.
See FAQs for more info.
See FAQs for more info.
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Protruding-mouth ZFS:0000035 |
larval locomotory behavior GO:0008345 |
disrupted PATO:0001507 |
abnormal PATO:0000460 |
| Larval:Protruding-mouth ZFS:0000035 |
trunk ZFA:0001115 |
curved PATO:0000406 |
abnormal PATO:0000460 |
Mutation Details
Allele Name:
sa985
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000060295 | Essential Splice Site | 304 | 412 | 5 | 8 |
| ENSDART00000127110 | Essential Splice Site | 315 | 423 | 5 | 8 |
Genomic Location (Zv9):
Chromosome 18 (position 20289900)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 20520123 |
| GRCz11 | 18 | 20509189 |
KASP Assay ID:
554-0889.1 (used for ordering genotyping assays)
KASP Sequence:
CTATGTAGGAGTGGGGAAGTGCTGGATTCTGCAGAAGGAATATGATAAGG[T/G]CAAGATTTAATTGTGTCTTTTAGATAACGTGTGAAYATTTGTGATCAACA
Long Flanking Sequence:
AAATCGAATCTGTCTGGCTATTCTTCTCTGAGCTCTCTTCAGATATTTTCTCTTTTTTGCGCAATTGTCTGTAAACCCTAAAAATGATTGTGCCTAAAACCTTAGTAGATCAGCAGTGTCTGCCCTGTTGGGCTCCAACAACCCTGCCAGATTCAAAGTCACGACCTTTCTTCTCAATTCTGATGCTCATTTTTAAACAGACCAATCTATATGATAGCTAAAGTTTGGGGACCACCTAATTTAGTGGCAACTGAGTTACATATGTCTATATGCTTAACTGTGGCAGCCATAATCATGATTATTTTTCAAGTAGTCCTGCCGCAGCATTCCATTGCCTATGTCAATGCTTCTCTTTATGCCCTCACCTTTAACACAGAAAGCATTCCCTCGCTATGAGTCCTCCATGTGCATAATGTCAGAGATTGGCAACCGCCTTGGACAAGCATCCATCTATGTAGGAGTGGGGAAGTGCTGGATTCTGCAGAAGGAATATGATAAGG[T/G]CAAGATTTAATTGTGTCTTTTAGATAACGTGTGAATATTTGTGATCAACATATACAGTTAAAAACAAACTTATTAGCCCCTGTGAAATTTTTTTTTGTGTTTGTTTGACAGAGCAAATACATTTTTTCCACAGTATTTCCATCATATTTTTCTTCTGAGGATAGTCTTAATTCTATTTTAAAAGTTATTGCAAATTAGCCCCCATTTTTTGGCTACAGAACAAACTACTTTTGTCCAATGACCTGCCTAAGTAACATGTTTTGCCTAATTAACCTACAGTTAAGCACTTTAGGCAGAACACAAGTATCTTGCCATTATACTAGCAGTCACAATGGCAAAATTATAAAGAAAAATGTGTTAGTTAATAAAACTATTGTTTAAAATGTGCTGAAGAAAATTCTGGGGGTGGCATGGAGGCTAGGTGATCACTTCACAGCAAGAAGGTCACTGGTTTGAGTCCTGGCTGGACCAGGAAGCCTTTCTTTGTGGATTTTGCATGG
Associated Phenotype:
Not determined