ZMP
arhgef16
Ensembl ID:
ZFIN ID:
Description:
rho guanine nucleotide exchange factor 16 [Source:RefSeq peptide;Acc:NP_001116755]
Human Orthologue:
ARHGEF16
Human Description:
Rho guanine nucleotide exchange factor (GEF) 16 [Source:HGNC Symbol;Acc:15515]
Mouse Orthologue:
Arhgef16
Mouse Description:
Rho guanine nucleotide exchange factor (GEF) 16 Gene [Source:MGI Symbol;Acc:MGI:2446219]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa9734 | Nonsense | Available for shipment | Available now |
| sa17621 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa9734
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000114811 | Nonsense | 168 | 606 | 3 | 15 |
| ENSDART00000131137 | Nonsense | 186 | 662 | 3 | 14 |
| ENSDART00000142979 | Nonsense | 168 | 606 | 4 | 15 |
The following transcripts of ENSDARG00000077114 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 49261180)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 47114575 |
| GRCz11 | 8 | 47105041 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TACTTATACCATACATACTTCTATAATCTACTTCCAGAGCCACGGTTTTA[T/A]CAGGAAATCAAGGAACGAGGCCTTAACGTCAGCAGCTTGAGCACAGAGGA
Long Flanking Sequence:
TAAACAGCTAAAGCTTGTAGTTTGTCACTTCCAACTAAATGGATCAACGGTAGATAGAGATAGATGAGATAATCAACGAGATAGTCATAACACGTTACTGCTGTGGATTCCAAATCAAGTGTCTCAGCTGGAAAAACACCGCACCGCCAATAGCTAAATAAAAATGCTTTAGTGAACATGTTTAGCAAATATTTATGTTAAGTAATCATAGGACACTATAGGACCATGCCTGCGTCACTTCATACTTCAGTTTCTCATCAAACCATGACCAATCAAATGCTCTCTAGTATCATAGATGCCCCGCCCCTTTCAAGATGCTAAAATAAAAAATTGTGCAGCCCTAATGCCAGCGAATGTTAATGAAACTACATTTATAAAGTGTTTTTGCAAAGTCTTGAGTTATAAGTTATACATACTTCCTATACATACTTATACTATACTTATACTATATACTTATACCATACATACTTCTATAATCTACTTCCAGAGCCACGGTTTTA[T/A]CAGGAAATCAAGGAACGAGGCCTTAACGTCAGCAGCTTGAGCACAGAGGAAGAGGAGCTTTCACCGGTGGGGCCACCAGGGGAAGATCAGGGCATAGTGGTGAAGAACTACAGGGCAGCGTACATCACATGGAGTCAGCTACCACAGGTGATGCTTCTGCTCTTTAGATCATGTTGTGGTTTGATTACTCTGTCAAAGGAGAAACATCAGATTTGAAATACTCTTAATAACATAATAAACTTTGCGACTGCTTTAAAGGGCACCTATTTTACCCCTTTTATAAGATGTAAGATAAGCCTTTGGTGTCTCCAGAATGTGTCTGTAAAGTTTCAGCTCAAAATACCCCTCAGAATATTTATTATAGGCTCCAGAACATGTCCATTTTGGTGTCTGAGTTTAGTGTAGCTGTTTTTGTAGCCTGTGGCTTTAAGTGTAAATGAGCTGCTTCTCCCCGCCCACTTTTCCCTTGTGCGTGTCTGCTTTTCCTGCATTACATCAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17621
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000114811 | Essential Splice Site | 290 | 606 | 5 | 15 |
| ENSDART00000131137 | Essential Splice Site | 308 | 662 | 5 | 14 |
| ENSDART00000142979 | Essential Splice Site | 290 | 606 | 6 | 15 |
The following transcripts of ENSDARG00000077114 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 49271838)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 47125233 |
| GRCz11 | 8 | 47115699 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACCATCACCTGTTCTCCAACATATCCGWCATCCAGGATGTCAGCAAACGG[T/C]ACASGCATCCTCTTATGTWCTCAAAAATCTTTCTTTTTTTTTTTCCTTTT
Long Flanking Sequence:
TTAATAAATAAAGGTTTAAATGAGCATTTCTTACAAACATTTTAGAGAAAATGTCAGACAGGGCCTTAAAAAAATTGATCTGAGAAAGAAGCGGGCACCGGGGTTGAGAACCCGTTCTAAACTATTCTGAATAAACTGATAATGTGAGTAATTTTGACGCTGTCTGAGTAATTTAACCGTTTTTAGCTGTTTAGGCTTTTTGAGTTGAGTAAATAGAAATGTTCTCGATGTTGTTAAAACCTCTGTGTATCTGGCATCCTTTTTTGCCGTTGAGCAAACAATATGTCACTACAAATTAATATAAATTAAGTAAATCATTGCATTCTGTATTTGTGCAGGTCATCTTTGAAATCATCACGTCAGAATATTCCTACCAGCACAGTTTGAGCATCCTGGTGCGTCATTTCAAGGACAGCGTGGATCTGAGAAAGACCATGACTGCAACAGAGCACCATCACCTGTTCTCCAACATATCCGTCATCCAGGATGTCAGCAAACGG[T/C]ACAGGCATCCTCTTATGTACTCAAAAATCTTTCTTTTTTTTTTTCCTTTTCGAAAAATGAAAGAGACACATGCTTTTAATAGTCAGTAAATGAAGAAATTGGATTTAATCAGGACTAGACACACTACTGAATTTGTCTAAAATGGATGTAAACGATGACTCTTTCCAGATTTGCAGGTACGTTTTGAGCACTTTACATTCATTTATCCTTGAACTGGAATGATATACAACCAGTGTGCCATTTACAGTTAACTCAATCCATTATTAATGTCAAATAAAGATACGGTGTGATGGAGAACATTCGATTCTGTTACTAAGTGTTGTTTAACTTGTTGTTAAACTTTTAAAACAGAGTTGGCAAACAGGGTTTCTATTTTTCAGCATTTTGTGCATTAGCTTAAGATGCTAACCTCATCAGATGTGTAATGTAATGTAATGCGTATTTATATAGCGCATTTATCGTGTTGTTGATACACCGAAATCGCTTCACAGTCATGAGGG
Associated Phenotype:
Not determined