Busch Lab

ZMP

sema4e

Ensembl ID:
ENSDARG00000052997
ZFIN ID:
ZDB-GENE-990715-7
Description:
Semaphorin-4E [Source:UniProtKB/Swiss-Prot;Acc:Q9YHX4]
Human Orthologue:
SEMA4D
Human Description:
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (se
Mouse Orthologue:
Sema4d
Mouse Description:
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (se

Alleles

There are 9 alleles of this gene:

Allele Name Consequence Status Availability
sa9636 Essential Splice Site Available for shipment Available now
sa9433 Nonsense Available for shipment Available now
sa19891 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa9636
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056252 Essential Splice Site None 766 None 16
ENSDART00000108861 Essential Splice Site 13 762 None 15
ENSDART00000109471 Essential Splice Site None 766 None 16
Genomic Location (Zv9):
Chromosome 2 (position 50142495)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 49838027
GRCz11 2 49572257
KASP Assay ID:
2259-2692.1 (used for ordering genotyping assays)
KASP Sequence:
GAGGAACCACTGATGYGTCACAGGARAACTGAGAGACYAACTTGGAAAGG[T/A]AGGCGYATGGGAAGTTGCTGCTGGTCCGGTTTTGACTATTGCWGCATCGT
Long Flanking Sequence:
CACAAAGGTAGGAACACACTCGCATTCTACTTTTTTTTAAAGTGTGAACACAAAGTGTGTTTTTAGGTAGTAAGAAAACCAAAACGTGATTTTCTTTTGTTTACTACAATAGATAAGCTGGTTTTATCTAAGATCAGAGCTTCGAGAACATGACACTCTCCTACACTCCTCCTCTTTCACACACACACACTTGCTCACACTTGTAGTGGCTTGTCTGAGATTGAGGAGTTTCTAAAAGCATGTTTTTTTTCCTCTTTTCTCTCCAGCTGAAGAATGTCTTTTGCTTCACGCTGCAGGATTTAGGCAGTTTAGCGCTCTCTCACACAAAGCAGCAGACACCATGAGCTCCATTCACTGCAGAGCCACGACTCCCAACACACTTTCTGCTGTCTCTGACACTTAGAGCACTTTGATTTGTGCATTGGAGAGCTGGAATAGTGTGTGTGTGAAGAGGAACCACTGATGTGTCACAGGAAAACTGAGAGACTAACTTGGAAAGG[T/A]AGGCGCATGGGAAGTTGCTGCTGGTCCGGTTTTGACTATTGCTGCATCGTAAAACGTGTTTTCAGAGGAATTTAGAGCGATATTGTAATGCATTGGATTTGCATATATGGCCTCTGATTGTATTCTGCTGCACTTTTTTTGTGTGCATCTCAGTTTTTGGACATTTACACCACAAACTGATTTTTTCTTTGCAATTTTTAACCAAACTAATGCACAATGTTCTTTTTTTATTGTAGTTTAATTTATATACATTGTTTAGCATAAATGAGTACACCCCCTAGGATAATTTACAATAATATATTTGTGCATATACAATTAAAGTCAGCAATTATTAGCCCCCCTTTGTTTTGTTTTTTTTTCTTCTTTTTTAGTATTTCCCAAATGATATTTAACAGAGCAAGGAAATTTTCACAGTGGGTCTGATAAAATTTTTTCTTCTGGAGAAAGTCTTATTTGTTTTATTTTGGCTAGAATAAAAGCAGTTTCTAATTTTTTTCAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9433
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056252 Nonsense 9 766 3 16
ENSDART00000108861 None None 762 None 15
ENSDART00000109471 Nonsense 9 766 3 16
Genomic Location (Zv9):
Chromosome 2 (position 50150714)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 49846246
GRCz11 2 49580476
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTTTTTTATAACAAGAGCACTGAATGATGTCTCTGCTGGCTGTTCWGTG[T/A]GTTTTGTATGTCTGGAGTCCAGCAATGCTGACCGGTGGGCTKGGATCAAC
Long Flanking Sequence:
TCGAAGCATTCGTGAGCATGTCACTTGCGAAAGCAGTTTTGGTTAATGCTATTGCTAGGTGTATTTCAGGATGTGGTGAGTTTTTTTTTCTTTCTTTTTTTTTAAGCTGTTCTAGCTTTGTGTCATTCTGAGGCTTGAAAAAGCAGAATCGTGTGTCTCTGTCAAGGTCCCAGAGCAAAAGCTTTCATCCTCTGCATTAGCATCACTATAGAAGTGACAGAAATACTTCTGCCAGCACCCCTGCCTGTACTCTCTCTCTTTCTCTCTCATTCAGATGGCCTCACAGCGCTCTTTGCTGCTTCTTTGAAGGGCATTCTTTGCAGCTAAAGTCATATATCTCAGTATGGAGGATCTCCGAACTGAAGCAGGGCAGAAGACAAGGATGAGAAAGCTTTGACAGAAAGACCACAGAGGAATTTTGCAATCGCAGACCGAAATCACGGACTGATTTTTTTTTTATAACAAGAGCACTGAATGATGTCTCTGCTGGCTGTTCTGTG[T/A]GTTTTGTATGTCTGGAGTCCAGCAATGCTGACCGGTGGGCTGGGATCAACACTGGATAGCCTACCTCGGAAAACAGTGCCAATTGGAAGTAAGTTGACTTTTTGAAAATCACATTTGATTATTATTAGAAAAAAGTGCCAGTGCTGTTTGTCACTATCATTGGCTAATATTTATAAATGCACTTGGGTACTTAAAAAAATTACATTCATTAGATACATAAATAGTAGTAAATTAATATTTTATTTCCATTTTCTTATTCAAAGGTGCTGAAATTTTAAAGTGCTTTCAGCTGTATTTTTAGCAGCATATTAAGCTTAAAATCATGTTCTTATACAGTTAAAGTCAGAATGATTCACTCTTCTGTGAATTTCTTTTCAAATATTACCCAAATTATGTTTAACAGAGCAATGACTTTTTTACAGTATTTTCATAATATCTTTTCTTCTGGAGAAAGTCTTATTTGTTTTATTTTGGTTAGAATAAAAGCAGTTTTAAGTTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19891
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000056252 Nonsense 161 766 7 16
ENSDART00000108861 Nonsense 157 762 6 15
ENSDART00000109471 Nonsense 161 766 7 16
Genomic Location (Zv9):
Chromosome 2 (position 50157424)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 49852956
GRCz11 2 49587186
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATGGTAAGCTGACTTTAGAGATCCTCCAAGAAGATACGAAAGGGAAATG[T/A]CCGTTCGACCCTTTTCAGCGATATACATCTGCAATGGTCGGTACGTACTG
Long Flanking Sequence:
ACTGTAAGTTGCAGTATTATAATCACTTATTAGCATTAATACATTTTTACTACTACTTTGGTAATTAGTGATGTAACATATTATACAAATATGAAGATGTTTAAGACTTACAAAAGCACCGTCTGAGGAAGTGGCTTTTGTATGTTTATTTACAGCAGATAAAAGGAAGTGTGTGTTGTAGCTTGGTCAGACATTGTGGTCAGAAAAGATCTTTGAGTTATTCCCCGTGTTGTTTTTGTCTTCTTCTTTAGAATGACTGCAAAAACTATATTCGAATTCTTCATAAAAAGGACGACGGCAGAATGTATGTCTGTGGAACCAAAGCGTTCAACCCCACCTGTGGCTATTTGGTAAGTGTCATCCATTTAATTCAGTGTTTGTTAGTGACCACAAATGTAGAATGTGCATCGTTTATTTGGTTGTTGCATGTTATTCTCATAGTCCTATGCGGATGGTAAGCTGACTTTAGAGATCCTCCAAGAAGATACGAAAGGGAAATG[T/A]CCGTTCGACCCTTTTCAGCGATATACATCTGCAATGGTCGGTACGTACTGCTTAGTTGTTTATTGACTAGATAATTTGTATTCATATCTGCAACACTCACAGTTTCATTTATTGCAAGTATTTTTACACATATAGTAATCTCTGCCTCGGTTTTCTCTCTCAGATGGAGCGTATTACTCTGCTACTTCAATGAACTTTCGGGGTTCAGAGCCGGTGATGATGCGCAGCACAGAGGAAAGCATTCGAACTGAGTTTACAAGCACCTGGCTCAGTGGTGAGAAAGTGTTCATGTCTAAACTAACCACCAAACACAATGTGAAAAAATGCAAGAGCACACTCAGTACGATACCCTTGTACATAACCACAACATACTTGCAAACTGAATGCACAGCTTATCAGATTTTTAGAACAAAGGCTACTGATAAACTGTTAAAGGTCCCATGAAATTAAAGTTTTTTTAGTCAATATCAGTATGTTAGTTTAAGGATATCTATAGTATA
Associated Phenotype:
Not determined