ZMP
prpf38b
Ensembl ID:
ZFIN ID:
Description:
Pre-mRNA-splicing factor 38B [Source:UniProtKB/Swiss-Prot;Acc:Q6P7Y3]
Human Orthologue:
PRPF38B
Human Description:
PRP38 pre-mRNA processing factor 38 (yeast) domain containing B [Source:HGNC Symbol;Acc:25512]
Mouse Orthologue:
Prpf38b
Mouse Description:
PRP38 pre-mRNA processing factor 38 (yeast) domain containing B Gene [Source:MGI Symbol;Acc:MGI:1914
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa39927 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa9573 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa39927
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000075080 | Nonsense | 56 | 501 | 1 | 6 |
| ENSDART00000131872 | Nonsense | 56 | 172 | 1 | 6 |
The following transcripts of ENSDARG00000053101 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 45718874)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 45810536 |
| GRCz11 | 2 | 45663534 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGATTCTGACAAACGTGCTTTCTTCACCCTACTTCAAGGTCCAGCTGTAC[G/T]AGCTCAAGACGTACCACGAGGTGGTGGACGAGATTTACTTCAAGGTGGCA
Long Flanking Sequence:
TGTGGTTTGTCATTTACGTCAAATTTGAAATGTTTCACTTCTTGGGAATAAGCAGGTGAAATAACTGGCAACCCCAATCATCGCGTCCCTTTCCGCCTCCCCTCTTCCGTGCGCCATCTTGTCCCCACAATTCGGTGTAACAGAGCGCTTCGCGTGCGTCTGCCTCCAACCCAGAGAATAAGAAACAAAACGACCTGAAAACACACTTGAATGAATTAAGAGACGTCGGTCCGCTTCTCGCGCACCTCGTCGGACGCGTTCCTTCGCGATATTCGTTAAGGTTAACGACTATTTTTGTCCGTTTTCTCATTTAATGGCGTTGTGAAGGAACTGCCATGGCGGGTAGTCAGCAGCAACAACAGCAGCAGGCCGTGAGCAAACCGACCGGCGGGAAACACGGCAATAATTTGCCATTATGGGGCAACGAGAAGACTATGAACCTCAACCCTATGATTCTGACAAACGTGCTTTCTTCACCCTACTTCAAGGTCCAGCTGTAC[G/T]AGCTCAAGACGTACCACGAGGTGGTGGACGAGATTTACTTCAAGGTGGCAAAATTACCCCGGGCCGATACGTGTGAAGCCTGTGGTTTTCCTTTTTGTGTTGATTTTGTCTTTTTGGTAGTAACTCATTCAGTAGGTCTTTATAAAAATCACTCCTTTTTGGTTGTACTTGCGTACATTGAAGAATACCGTGTTAGGCCATAGATGCTAACTTGCTTATGCTAACTTTTTCAAAATAGCGCTGTTTTATATATTAAAGGGTTTGATTACCTAGAATGAAAATCCTGTCATTATTATCCCAGTGTTTCTAACTAACGTTAACGTTATTATGCCTAATTGTGTGATGTAGTTAAATGAAGTTTAGACACAGTGACCACTTCATTCACCACTTACTTTAATTGTAACGTTAATGGAAAATTATTCAGTTAGCTGGTGACTGTTCGTGCGAGCAGGTAAATTAAATAACTTATCTCCCAAATCGCTTTCCACTATTAGAGCCCG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9573
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000075080 | Nonsense | 492 | 501 | 6 | 6 |
| ENSDART00000131872 | None | None | 172 | None | 6 |
The following transcripts of ENSDARG00000053101 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 45711102)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 45802764 |
| GRCz11 | 2 | 45655762 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATGAACGAATACATGCAAGACAAGASCGCCCCAGTTCTGAATCTGGAGAA[C/T]RAACAAACAGTGTTCGAGCAGATTCTCCCTGATCCAAGTTTGTCTTCTCC
Long Flanking Sequence:
ACGCAGAACGCCGGCGGAGCAGAAGCAGAGAACGACGCCGGAGTCGCAGCACCAGCCGAGACAAGAGAACGGAGAGAAAAGACCGTGATAAAGACAGAGAGGCAGAGAGTGAGAGAGAGCGTAGTCGCAAGAAAGACAGGGAGCACCATAAAGATCGAGAGAGGTCAAAAGACAAGAGGAGTAAAGGAGAGGGAGAGGAGCGGAGGCACAAGGATGATAAGGAGGAGAAAAAACACAGGGAAGAAAAGAGAAGTAAACGCTCGAGAAGCAGAAGCAGAGACCGCAAACACAAAGCTGAGAGATCTAGCAAGAAACGCTCCCGCTCTGGCAGCAGGAGCAGGCAGGAAGCCGGGGAAGAGAAGAACAGGAAGCGGGAACGCAGCCATAGTAAGGATCGCCAACACAAGCGCAGTCGCAGCAAAGAGCGATCGCACCGTCGGGAATCCAGCAATGAACGAATACATGCAAGACAAGACCGCCCCAGTTCTGAATCTGGAGAA[C/T]GAACAAACAGTGTTCGAGCAGATTCTCCCTGATCCAAGTTTGTCTTCTCCCCTCTCTCTCTCTCTCTCTCCCTCTGCAACTTTATTCCGATCCCTCTCTTATTACTTTGTGTTCTTTTCTTTTAATCCCCTTGTTAAAAGGCAAAAGCCTGGCTTTTTTTCTGCACTGTTATCCACCACTTGTGTAGATATTAAAAATGTAATTTTCTCTCAGTTCCCCATTTACAAATGTCAGGACTCAAGATGACATTTTAAAATATTTTTTATTATTTCCCTTTTCTCCCAGATTTGTTTTCAGGATTTCCACAAATGGCTGTGTACATAGAGCTCAGAGAATGTTTTAAATTTCAACAGAGTGTCCACTGAGTTGAGTTTGTGGCACAGGGAGCTGAAAGCTATGCTGACATTGTGCTGTTTGATTCATTGCTCTGTTGCATCTCATTTTCTAATAAAATTGTATGGAATAGAATTGCTCAGTTGTATAGTTTTGTCATTAAGCAA
Associated Phenotype:
Not determined