Busch Lab

ZMP

cntn2

Ensembl ID:
ENSDARG00000000472
ZFIN IDs:
ZDB-GENE-990630-12, ZDB-GENE-990630-12
Description:
contactin-2 [Source:RefSeq peptide;Acc:NP_571521]
Human Orthologue:
CNTN2
Human Description:
contactin 2 (axonal) [Source:HGNC Symbol;Acc:2172]
Mouse Orthologue:
Cntn2
Mouse Description:
contactin 2 Gene [Source:MGI Symbol;Acc:MGI:104518]

Alleles

There are 10 alleles of this gene:

Allele Name Consequence Status Availability
sa9412 Nonsense Available for shipment Available now
sa21903 Nonsense Available for shipment Available now
sa12173 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa9412
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000486 Nonsense 109 853 3 18
ENSDART00000103800 None None 412 None 10
ENSDART00000000486 Nonsense 109 853 3 18
ENSDART00000103800 None None 412 None 10
Genomic Location (Zv9):
Chromosome 11 (position 24888728)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 23728027
GRCz11 11 23965884
KASP Assay ID:
2260-4257.1 (used for ordering genotyping assays)
KASP Sequence:
CTTGTGATCAACAACCCTCAGAATGGGCGAGATGGCGGCTCGTACCAGTG[T/A]CTCGCAATCAACCGATGCRGCACCATTGTTAGCCGCGTCGCTAATCTCAA
Long Flanking Sequence:
GTTCCGATCTGTACGAATCACAGATCAACTGTGATCCATTAACACCCCTAATTATTATTAATGATTAAAAAAGCTGTGCTGCTTAATTTGTTTATGGAACATGGAATTTTTTTGCTATTTAGTACTTCTGATTTCCAAAGTGATTTCCAAAGTTTTTTATCATACTGTTTTTTTATATATATTATATAATTGAGATCCAGTTTTATATGTAATTTTGACAAAGAAAACTTGAAGATACAATGTATTTGATGAGAGCAGTTTTTAAGTAGATTATTGATATTTCAATAAAATCAATAAAAATATACTATATATATGGCAAATTGGTTATTGACTTTCCTTTACTCTGGTAATAAAGTCAGATCTTGTGTGTGATTTCCTCCCAGGTGGCGTGTGAATGGCACTGACATATCATTTGCTGAAGAGTCGCACTACACACAGGTTGCAGGAAACCTTGTGATCAACAACCCTCAGAATGGGCGAGATGGCGGCTCGTACCAGTG[T/A]CTCGCAATCAACCGATGCGGCACCATTGTTAGCCGCGTCGCTAATCTCAAGTTCGGCTGTGAGTAACCATTGTCCAAGTAGAAAACTGGGTCTTGTCTACTACTCGTGCTTGATTTATACTGTGCTTTCTTCCAGACCTGCATGATTTTCCCCCTGAGAGCAGAAGTCCTCAGACGGTCCATGAAGGAATGGGAACATTTCTTGCCTGCCAGCCACCAGCTCATTACCCAGGTAAACACACACACATATCAGTTAGCAAAACATTTCACTCTTTTTTTATTTCGTTAACTCTTGCATCCCTTCTGTTTGTTAGCTTTGTCCTACCGCTGGTTTATCAACGAGTTCCCTAACTTCATCCAGCCAGAAGCGGGCAGGTGGTTTGTTTCTCAGGTCACTGGTAACTTGTATCTTGCTAACGCGAGAGCCAATGACACGGGCAACTATTTCTGCTTCACCACCATCAACATGGATGTCAGCACCAAGAGCATCTTCAGCAAAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21903
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000486 Nonsense 693 853 15 18
ENSDART00000103800 Nonsense 252 412 7 10
Genomic Location (Zv9):
Chromosome 11 (position 24899036)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 23738335
GRCz11 11 23976192
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTTCGGCCCTGGATGGATTATGAGTTCCAGGTCATTGCCAGCAACATCT[T/A]GGGCAGCGGAGAACCAAGCATGCCTTCCCCGCGTGCACAAACCAAAGAAG
Long Flanking Sequence:
TAATTAATGTATTTAATGTATAATATAATATTATTATAATATAATATAGTATAATATAATAGTATTATTATTATTTTATATTTCTTTCTATTTTAATATGGTAATAATATATTAAGATATATTTTATTAATTCTTTTTTTATTCTCTTTTGTTTTGGTATCTTTATATTTTTCTAGTCTATTTTTCATTTATTCACTGTTACAGCCACTTTTCTGAATGATTGAACTAATCATACAATTACATGCATACATGTATTTGCTTGCTTACTTTACCCCATAAACTGCCTAAAGAAAAGCTGCCCAGGACACTTGTTTGAAAAATATAGTAGTATTATGACATCATATATAATGTTACCCTTAGTAATCGAATGCATACCTTTCATTTTGTGCTAATGCTTCCTCCAGACCCTGCAAACATAGAAGGAAATGCTGAATCTGCACGTGTGATAGATCTTCGGCCCTGGATGGATTATGAGTTCCAGGTCATTGCCAGCAACATCT[T/A]GGGCAGCGGAGAACCAAGCATGCCTTCCCCGCGTGCACAAACCAAAGAAGCAGGTCAGGACCGTTACACTTTTATTAGTGCTAAATAAAAATCCAAACAAACCGATGATAAACTATTATTGTGGTTCCAAACAATAACAAACTTGATTGATAGAAGGGTAATATTTTGTGTTACAGCACCAACTGTGGCTCCCAGTGGACTCGGTGGAGGTGGAGGAAACCGTAATGAACTTATTATTACATGGACTGTAAGTTCTATTTGTGTAATTTGATGTTAGAAATGCTTAATACTTTTTACTCTGTCCAGTATTTACACATTTTTCCTTGTGCCCCATGATGCCTAGCATGAATTATAGTTTCAACAATGTTTTAAACAACTGGTTTCAATGAGCTGTCATTTTTCCCCTCAAAGTCCTTCCATTGATTATTAAACTTATTAGAATGAACAAATTGCTTTCAAACCTGAAAAAAAAGTCTTTCTGCAAAAATATTACAGTTGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12173
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000486 Nonsense 775 853 17 18
ENSDART00000103800 Nonsense 334 412 9 10
Genomic Location (Zv9):
Chromosome 11 (position 24900509)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 23739808
GRCz11 11 23977665
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACATGGACGGTGGTGAAGGTGCCAAATGTGGAGTCATCTCGATATGTGTA[C/A]AGCAATGACAGTCTGACAGCATACTGCCCGTTCGAGGTCCGAATCAAGGC
Long Flanking Sequence:
GTAGGGAATACAAAGAGAAAATAATCCAGAGAAACAAATACAGTGAACTCAAAACAGCTTTGTCCACAGATAAGTTTGTTACATTAATGTCACATTCAAATAGCAAGCGTAATATTGTTTTCATGACTGTAAGATTAGACTTCGTGCTTTATATTTATCAGAGTATATTGATTATTTTTTGCACAAACTTAATGTTTCAAATGATTTGTTTTAATTCATTTAAATATACGTTCCTCAACCTGGAAGTGCAACCAGTAATTTGAAACACAGTATTCACATTTGGGAAAAAGATGTGTAGAATTGCAAACAGAAGGTCAATAGATGTGTCTTTATTACCCTCAACAAAGAAATTAACATTTCTGCTGGTATGCATCACAGCCCATGGCCAGAGAGTATCAGAATGGAGACAGTTTTGGTTATATCCTGGCATTCAGAAAGCAAGGCATACCAACATGGACGGTGGTGAAGGTGCCAAATGTGGAGTCATCTCGATATGTGTA[C/A]AGCAATGACAGTCTGACAGCATACTGCCCGTTCGAGGTCCGAATCAAGGCCTACAACAAGAAAGGAGAAGGGCCCTTCAGCCAGATTGCTGTAGTACACTCTGCGGAGGAGGGTGAGGGTTATTACTGAGGATTTTATTTTTATGGATATAATTATAGAATTTATTATATTCTGATTGAATGTTACTTAACCCCTAAAGGGCAGACATAGGAGATTACCTAATTAAAAGCTTAAATTGTTTCAAGAAAGCAAAATTATCACATTTATTTAAATGATGTTATTTCTTTTATACTATGAAATGCCATAAAGGTCTATCAATTGACTGGTTAATTTACATTAACTAGATCATTTAAAAAAAAAACACGCACACAAATTTTGATTTAAATGAAATGTTAATGAAATTGTTTTCATTTAAATTGAGAGATTTCTGTATTTCCATTGAAATTATGTTGACCAAAAATGCATGAATCAAGCAACTATTTTTTAAATAATTAAAACAG
Associated Phenotype:
Not determined