ZMP

pcdh18a

Ensembl ID:

ENSDARG00000089805

ZFIN ID:

ZDB-GENE-000607-1

Description:

protocadherin 18a [Source:RefSeq peptide;Acc:NP_001108530]

Human Orthologue:

PCDH18

Human Description:

protocadherin 18 [Source:HGNC Symbol;Acc:14268]

Mouse Orthologue:

Pcdh18

Mouse Description:

protocadherin 18 Gene [Source:MGI Symbol;Acc:MGI:1920423]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa10805	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa10805

Status:

Available for shipment
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Availability:

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Mutation:

G > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000127838	Nonsense	229	1123	1	4

Genomic Location (Zv9):

Chromosome 1 (position 12154753)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	12583166
GRCz11	1	13269966

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GCTATGAACTCCAGCTCACAGCCTCAGACAGGGGCGYTCCCCCCAAATTT[G/T]GAAYAACGCTCCTGAAAATCAGCATAGCTGACTCGAACGACAACAATCCA

Long Flanking Sequence:

CGATTCCGTTACGATTTAGAGCCATGCAGCGGGGAAGCGCGTCGCTTCTTTCGGTGCGCGACCAGGATGGAGAGATCAGCATCAGGACCAAAATAGACCGCGAGAAACTGTGTGAAAAGAATCTGAACTGCACTATCGAGTTTGATGTTCTCACTCTTCCCACGGAGCACCTACAGCTGTTTCATATTGAAGTGGAGATTTTGGACATTAACGACAATGCGCCACAGTTCGCGCGCCCCGTCATTCCCATAGAGATCTCCGAAACCGCCGCCGTGGGGACGCGCATTCCCCTTGACAGCGCCACCGATCCAGACGTCGGGGAGAACTCACTGAACACATACTCTCTGACCCCGTCTGACTTCTTTAAGATTGACATTCTAACCAGAACCGATGGAGCCAAGTACGCAGAGCTCGTTGTGTTAAAAGAGCTTGATAGAGAGGTGCGAGCAAGCTATGAACTCCAGCTCACAGCCTCAGACAGGGGCGTTCCCCCCAAATTT[G/T]GAACAACGCTCCTGAAAATCAGCATAGCTGACTCGAACGACAACAATCCAGTGTTTGAGAAGCCATCTTATGTGATCAACTTGCTTGAAAATTCCCCTTTAGGCAGTTTGCTTATTGATCTGAACGCCACTGACCCAGATGAAGGGGCCAATGGGAAAATCATATACTCTTTCAGCAGTCACGTGTCACCTAAAATATTAGAGACCTTTAAGATTAATTCTGATAATGGTCATTTGACACTGATGAGGAAAGTTGACTTTGAAAGCACAAATTCTTATGACATAGATGTTCAAGCTCAAGACATGGGCCCTAACTCGATGCCAGCCCACTGTAAAGTCATAATCAAAGTAGTGGACGTGAATGACAACAAACCTGACATCAGCGTCAACTTGATGTCCACTGGTAATGAGGAGATAGCTTATATATCAGAGACGGCTCCTGTAGATACATTCGTGGCTCTGGTGAGTGTAAATGATCTGGACTCTGGCTTAAATGGAGAG

Associated Phenotype:

Not determined