Busch Lab

ZMP

LOC100002138

Ensembl ID:
ENSDARG00000086186
Human Orthologue:
OPN5
Human Description:
opsin 5 [Source:HGNC Symbol;Acc:19992]
Mouse Orthologue:
Opn5
Mouse Description:
opsin 5 Gene [Source:MGI Symbol;Acc:MGI:2662912]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa6648 Nonsense Mutation detected in F1 DNA Not yet available
sa9326 Nonsense Mutation detected in F1 DNA Not yet available
sa37144 Splice Site, Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa6648
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000128696 Nonsense 65 285 1 4
Genomic Location (Zv9):
Chromosome 20 (position 44484285)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 44382179
GRCz11 20 44280203
KASP Assay ID:
554-4412.1 (used for ordering genotyping assays)
KASP Sequence:
TCAATCGCYTCTGCTTTCAACCATGCGTGGATTGGTGGTGACCCGTCCTG[T/A]CTGTWTTATGGCCTGATGGGTATKMTTTTCAGCGTGGCCAGCATTATGAC
Long Flanking Sequence:
ATGTCAGGTTTCCACTTTTTTTCTTGTGCTTGAATGTTAAAACGGCCCTCCTATGGATTGTCAGTCACTAAAATGGCCCCTTGCCAATTTTAGTTTGAGATCCCTGGTTTACACAATCTTTCATCTCATTTTACGCTTGCTTAAGTCTATTTAACTGAATGTATATTAATTACATTACAACATCATTGCTGTAAAACAAGCCTCATGAAGTTGAAAATAGTCAGATAATTCAGTTTATCATTAGCTGTGGCTGTGCATATACCTCATTGTATTTATCAGAATTTGACTTTCCTTACCACTCATTTTCTCTCAGCCATTCTCTCCATCCTTGGCAATGCAGCGGTTCTGTTAACAGCAGCCTGGCGTCACAGCGTTCTCAAAGCTCCTGAACTCCTCACAGTCAATCTGGCTGTGACTGACATTGGCATGGCTCTCAGCATGTACCCACTTTCAATCGCCTCTGCTTTCAACCATGCGTGGATTGGTGGTGACCCGTCCTG[T/A]CTGTATTATGGCCTGATGGGTATGATTTTCAGCGTGGCCAGCATTATGACTCTTGCTGTCATGGGGTTGGTGAGATATCTTGTGACAGGAAACCCTCCAAAATCAGGTATGATATAAGTCAGATTCAAATGGCATCTCTGAGAAATATAAACATACTGTATTATCCGTTCAGAAATAAAGGTATAAGAGCTGTCACTGGACTGAGGTGGTACCTTCTCAAAAGATACATATTTGTGATCCAGGACCTGGGTTCCACAATTCCTTCGTGTTGTCCTAACATAAATTGTTTAAGTCAACGTAATTGTTTTCACAAATTCAATTCAATTCAATTCAGCCTTATTTGTATAGCGCTTTTACAATGTAAATTGTGTCAAAGCAGCTTCACATAAATGGTCATAGTAACTGGAACAGTGTAGTTCAGTTTTTAGTGTTTAAGTTCAGTTCAGTTCAGTTTAGCTCAGTTCAGTGTGATTTAATCATTACTGAGAGTTCAAACACTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9326
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000128696 Nonsense 88 285 1 4
Genomic Location (Zv9):
Chromosome 20 (position 44484353)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 44382247
GRCz11 20 44280271
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGGTATKMTTTTCAGCGTGGCCAGCATTATGACTCTTGCTGTCATGGGGT[T/A]GGTGAGATATCTTGTGACAGGAAACCCTCCAAAATCAGGTATGATATAAG
Long Flanking Sequence:
TAAAATGGCCCCTTGCCAATTTTAGTTTGAGATCCCTGGTTTACACAATCTTTCATCTCATTTTACGCTTGCTTAAGTCTATTTAACTGAATGTATATTAATTACATTACAACATCATTGCTGTAAAACAAGCCTCATGAAGTTGAAAATAGTCAGATAATTCAGTTTATCATTAGCTGTGGCTGTGCATATACCTCATTGTATTTATCAGAATTTGACTTTCCTTACCACTCATTTTCTCTCAGCCATTCTCTCCATCCTTGGCAATGCAGCGGTTCTGTTAACAGCAGCCTGGCGTCACAGCGTTCTCAAAGCTCCTGAACTCCTCACAGTCAATCTGGCTGTGACTGACATTGGCATGGCTCTCAGCATGTACCCACTTTCAATCGCCTCTGCTTTCAACCATGCGTGGATTGGTGGTGACCCGTCCTGTCTGTATTATGGCCTGATGGGTATGATTTTCAGCGTGGCCAGCATTATGACTCTTGCTGTCATGGGGT[T/A]GGTGAGATATCTTGTGACAGGAAACCCTCCAAAATCAGGTATGATATAAGTCAGATTCAAATGGCATCTCTGAGAAATATAAACATACTGTATTATCCGTTCAGAAATAAAGGTATAAGAGCTGTCACTGGACTGAGGTGGTACCTTCTCAAAAGATACATATTTGTGATCCAGGACCTGGGTTCCACAATTCCTTCGTGTTGTCCTAACATAAATTGTTTAAGTCAACGTAATTGTTTTCACAAATTCAATTCAATTCAATTCAGCCTTATTTGTATAGCGCTTTTACAATGTAAATTGTGTCAAAGCAGCTTCACATAAATGGTCATAGTAACTGGAACAGTGTAGTTCAGTTTTTAGTGTTTAAGTTCAGTTCAGTTCAGTTTAGCTCAGTTCAGTGTGATTTAATCATTACTGAGAGTTCAAACACTGAAGAGCAAATTCATCGATGCGTAGCTCTACCAATCCTGAACCATGCGAGCCAATGGCAACAGCGGAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37144
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000128696 Splice Site, Nonsense 206 285 3 4
Genomic Location (Zv9):
Chromosome 20 (position 44490551)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 44388445
GRCz11 20 44286464
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGTGCTTTTTCCACCTTTTCTGTATTAGATCTCCTTGTTTATTTGTAAT[C/A]AAAAGTCTGCTATATCATGCAAAAAAAAATAAGTTCTGTCAAAAGTTGCC
Long Flanking Sequence:
ATTATTACAAAACAAGATGGAGATTTCATTGCAGGGTACTTTATTTATATTCTCCTGGATTTTGTATAAGTGTGGTGGTGTTTGCATCTGATTTTATTTTTAGTGGTGCTGTCAAACGAATTATCGTGTACAAAAAATGTTTAGTACACATGGATGTATTGAATAAATGTTTATTACAGGGGTTTTTCTTCCATTTTTCAGCCAGTTTCTTGAACTTTCTCCCATTTATAAGCAAAACCTTTTGGAAGTCTATTAAAGCTGTTTGGCATTTCTTATTTTGGCTGATTTAAACAATTATAAACAACATAAAACAAACATTTTGATATTCTAATAGCGATTCCTACATAGAAGAATAATTTCCTGCCCTCTAACTTAGTCTCATTGACGTCATGTAAAAACAACGTCTGATTTTCCCAATATTGTGCAGCCCTAATTTTCATTTGTATTGCTTTGTGCTTTTTCCACCTTTTCTGTATTAGATCTCCTTGTTTATTTGTAAT[C/A]AAAAGTCTGCTATATCATGCAAAAAAAAATAAGTTCTGTCAAAAGTTGCCATTATAATGCATTGTGCTGAGATTTGCCAGCACTATAAACACAACTGACACTGTAAAAACAGTGATCTGGCCCTTTAAGTGTTGAACGTTCTGGGTCACACTTTTAGCAAACCCTAAAGGTTTCACACGTCTGCTGAAAAACTCTATCCTGGTACAGTGACAGACGCTGTTTCACACCCCAGATCCATCTTTTGATCACAACAAAGTTGTTTGTCTCAGTTGGTTTTAAACTATAAAACTAAAAGGAACATTTTACTGACAAAAATGATAGAAGTGGGTAAAGGTCAAGCACTATTCAACACGTAAAGGTCACTAATGGGTGTAAACAGGTTCTAAGAAATAGCCCCATGTAATTTTCCAGGAATATACAGTATATTTAAAGGCTAAAAATGTTTCATAATTGTATAATCCCTCCTGGATATAAGGGCAAAATGGTAATGGGGTGTTTCT
Associated Phenotype:
Not determined