Busch Lab

ZMP

lingo2

Ensembl ID:
ENSDARG00000069970
ZFIN ID:
ZDB-GENE-080723-57
Description:
leucine rich repeat and Ig domain containing 2-like [Source:RefSeq peptide;Acc:NP_001139054]
Human Orthologue:
LINGO2
Human Description:
leucine rich repeat and Ig domain containing 2 [Source:HGNC Symbol;Acc:21207]
Mouse Orthologue:
Lingo2
Mouse Description:
leucine rich repeat and Ig domain containing 2 Gene [Source:MGI Symbol;Acc:MGI:2442298]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa9260 Nonsense Mutation detected in F1 DNA Not yet available
sa9317 Nonsense Mutation detected in F1 DNA Not yet available
sa35437 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa9260
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102279 Nonsense 508 607 1 1
ENSDART00000102279 Nonsense 508 607 1 1
Genomic Location (Zv9):
Chromosome 13 (position 12609987)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 12608355
GRCz11 13 12740830
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCYGTAACACTCGCRGTTAAAACCTCTGGAATCAGGGACAGGGCCCTTTA[C/A]GCGAACCGCAGCTTTCTTTTTGACCCCGACTACAATAGTTCCCTGATAAA
Long Flanking Sequence:
GAGGCCCTGCAGACTCTTTTGATTGGCCAGAATCCGTTAGTTTGCGACTGCCGTCTACGCTGGCTCCTGGAAAGGACTCCACCTTTGCTGTATGGAGATGTTCAACCTGAATGTAGTGCTCCTGCCCCCTTGGCTGGAAAGCCTCTTCGAGATCTTGTGGAAGCTCAAATCTCTCGCTATGTAATTTGCACCAAACCCAGGGTCATCTCCATGGCGTCTTACCCGGCACAGGCAGAAGAAGGACAGAGAGCTTGGCTGTATTGCAGTGCCGATGGAGCGCCGCCTCCATCAGTGTCATGGCTAACACCACTTAGACGACACATTACCACAAAGAGTACTGGAAGGGTGGTGGTCCACACTAATGGCTCGCTTGAGTTTCGCATGGCAGAGCCTCAGGATAGTGGCATGTACGTCTGCGTAGCATCAAACCCCGCAGGTAATGCTACTCTGTCCGTAACACTCGCGGTTAAAACCTCTGGAATCAGGGACAGGGCCCTTTA[C/A]GCGAACCGCAGCTTTCTTTTTGACCCCGACTACAATAGTTCCCTGATAAACGGCACAGAGGAGTACACCATCAGGGTGGTCCTGGACTTCACCACCATCCTGGTCTCTACAGCAATGGGCTGCCTCAGCTTTCTGGGTGTTGTTTTGTTTTGTTTCTTGTTGTTGTTTGCATGGAGTCGTGGCAAAGGGAAGCACAGAGGAAGCGTGGACATTCAATACGTTCCACGGAAGAGGAAAGGCGCAAACTCAGAACTTACAGAAACAAGCGGGCCAAGACGAGTCAACATGAAGATGATCTGAACTTTGTGAATGACAGAGGATTTCACAGGTTGCATGGTTGCGTATGCGTATCTGTTGGACTTTGTGAGTCTTTGGGTAAATGTGCTGCACAGGATGTGTTTAGTCATGAAAGTTTACATGTGGTATCCCAATGAAAAAAAAAGAGAGCAAAAGAACTACGCCAAACCATATAACGCGCGTCGTCTGCGATGCTTTGTCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9317
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102279 Nonsense 508 607 1 1
ENSDART00000102279 Nonsense 508 607 1 1
Genomic Location (Zv9):
Chromosome 13 (position 12609987)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 12608355
GRCz11 13 12740830
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCYGTAACACTCGCRGTTAAAACCTCTGGAATCAGGGACAGGGCCCTTTA[C/A]GCGAACCGCAGCTTTCTTTTTGACCCCGACTACAATAGTTCCCTGATAAA
Long Flanking Sequence:
GAGGCCCTGCAGACTCTTTTGATTGGCCAGAATCCGTTAGTTTGCGACTGCCGTCTACGCTGGCTCCTGGAAAGGACTCCACCTTTGCTGTATGGAGATGTTCAACCTGAATGTAGTGCTCCTGCCCCCTTGGCTGGAAAGCCTCTTCGAGATCTTGTGGAAGCTCAAATCTCTCGCTATGTAATTTGCACCAAACCCAGGGTCATCTCCATGGCGTCTTACCCGGCACAGGCAGAAGAAGGACAGAGAGCTTGGCTGTATTGCAGTGCCGATGGAGCGCCGCCTCCATCAGTGTCATGGCTAACACCACTTAGACGACACATTACCACAAAGAGTACTGGAAGGGTGGTGGTCCACACTAATGGCTCGCTTGAGTTTCGCATGGCAGAGCCTCAGGATAGTGGCATGTACGTCTGCGTAGCATCAAACCCCGCAGGTAATGCTACTCTGTCCGTAACACTCGCGGTTAAAACCTCTGGAATCAGGGACAGGGCCCTTTA[C/A]GCGAACCGCAGCTTTCTTTTTGACCCCGACTACAATAGTTCCCTGATAAACGGCACAGAGGAGTACACCATCAGGGTGGTCCTGGACTTCACCACCATCCTGGTCTCTACAGCAATGGGCTGCCTCAGCTTTCTGGGTGTTGTTTTGTTTTGTTTCTTGTTGTTGTTTGCATGGAGTCGTGGCAAAGGGAAGCACAGAGGAAGCGTGGACATTCAATACGTTCCACGGAAGAGGAAAGGCGCAAACTCAGAACTTACAGAAACAAGCGGGCCAAGACGAGTCAACATGAAGATGATCTGAACTTTGTGAATGACAGAGGATTTCACAGGTTGCATGGTTGCGTATGCGTATCTGTTGGACTTTGTGAGTCTTTGGGTAAATGTGCTGCACAGGATGTGTTTAGTCATGAAAGTTTACATGTGGTATCCCAATGAAAAAAAAAGAGAGCAAAAGAACTACGCCAAACCATATAACGCGCGTCGTCTGCGATGCTTTGTCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35437
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102279 Nonsense 601 607 1 1
Genomic Location (Zv9):
Chromosome 13 (position 12610264)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 12608632
GRCz11 13 12741107
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGAAGAGGAAAGGCGCAAACTCAGAACTTACAGAAACAAGCGGGCCAAGA[C/T]GAGTCAACATGAAGATGATCTGAACTTTGTGAATGACAGAGGATTTCACA
Long Flanking Sequence:
CGCCGCCTCCATCAGTGTCATGGCTAACACCACTTAGACGACACATTACCACAAAGAGTACTGGAAGGGTGGTGGTCCACACTAATGGCTCGCTTGAGTTTCGCATGGCAGAGCCTCAGGATAGTGGCATGTACGTCTGCGTAGCATCAAACCCCGCAGGTAATGCTACTCTGTCCGTAACACTCGCGGTTAAAACCTCTGGAATCAGGGACAGGGCCCTTTACGCGAACCGCAGCTTTCTTTTTGACCCCGACTACAATAGTTCCCTGATAAACGGCACAGAGGAGTACACCATCAGGGTGGTCCTGGACTTCACCACCATCCTGGTCTCTACAGCAATGGGCTGCCTCAGCTTTCTGGGTGTTGTTTTGTTTTGTTTCTTGTTGTTGTTTGCATGGAGTCGTGGCAAAGGGAAGCACAGAGGAAGCGTGGACATTCAATACGTTCCACGGAAGAGGAAAGGCGCAAACTCAGAACTTACAGAAACAAGCGGGCCAAGA[C/T]GAGTCAACATGAAGATGATCTGAACTTTGTGAATGACAGAGGATTTCACAGGTTGCATGGTTGCGTATGCGTATCTGTTGGACTTTGTGAGTCTTTGGGTAAATGTGCTGCACAGGATGTGTTTAGTCATGAAAGTTTACATGTGGTATCCCAATGAAAAAAAAAGAGAGCAAAAGAACTACGCCAAACCATATAACGCGCGTCGTCTGCGATGCTTTGTCTGTGGAAAGCATTATTTGGACATTGCAGACGTGATTTAGTTAAAGTTGTTGTATATATTTCATATTTGTGGGAAAGAATGGTATATTTCTATATATAAATATATACACACACACATGAATATATATCTATTTACAGATACATTACAATTACTTTTCAAAACGCTGCAAAAACTCAAAAGTTGTCTTCCCCAATAAGCAAAGTATCTACTGGAAAAAGCCTCGGCTGTGCTGTGTTGTGAAGTGTTTGGTTTTGCTCAGAATTCTTGTTCTCCTGGGACA
Associated Phenotype:
Not determined