Busch Lab

ZMP

tmf1

Ensembl ID:
ENSDARG00000057997
ZFIN ID:
ZDB-GENE-040801-25
Description:
TATA element modulatory factor [Source:RefSeq peptide;Acc:NP_001003522]
Human Orthologue:
TMF1
Human Description:
TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:11870]
Mouse Orthologue:
Tmf1
Mouse Description:
TATA element modulatory factor 1 Gene [Source:MGI Symbol;Acc:MGI:2684999]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa14896 Essential Splice Site Available for shipment Available now
sa5841 Nonsense Mutation detected in F1 DNA Not yet available
sa9263 Nonsense Mutation detected in F1 DNA Not yet available
sa41805 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa12876 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa14896
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000080770 Essential Splice Site 45 1135 1 17
Genomic Location (Zv9):
Chromosome 11 (position 18281941)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 17647777
GRCz11 11 17782412
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GACATTAAAGAAGAGGAGTGGGGTGACAYAACMGGACAGAACTTCCCTGG[T/C]AAGTTTAAGTAKGAATGGKGTAAKTTGAGTGRAAAAANGAAGATGGAGTGT
Long Flanking Sequence:
CGGGAAGTAGATCTCGAGCTGCCAGAGGAAAACAAAACAATGCGTACAAGTCCAACCTAAGAGTCGAGGATTGCGAAAGTGAAGGAAAAATGTCGCCTATTCCCTCCTTTAATTATTTATATTATCGACTTTCGTTTTAGCCCTATATTATGTCGACTGTCAGCAAATTGTCTGTTGTTTTGCGAGCAGAACTAGCCGCCAAGCTAATGTGGACAGCGGCCTAACAAAACAAACACACATCAACCTGCTCCGGCTGTTAGTGTGGAATAAAGCTGCTCTCGTTTGGGAATGCTTTTAAAAATGTCGTCTTTTATATAGACGTTCGCTGGACTGTCACACAATCGGGTGGAAGTACGTTAGAGCAATATGAGTTGGTTCAACGCTTCACATCTGTCGAGTTTTGCCAAACAAGCTTTGACAACTGCTCAGAAATCTATCGACAGGGTCCTGGACATTAAAGAAGAGGAGTGGGGTGACACAACCGGACAGAACTTCCCTGG[T/C]AAGTTTAAGTATGAATGGTGTAATTTGAGTGGAAAAAGAAGATGGAGTGTGTTTAATGATTCTTGCTTGATATATTTATGCAGGCTATGGATTTATTCAAAGTCATCTAACGTTAAGTCATTTCCAAATGGACACCAATACCCACAGACAAGCATCTTTTTAGTTGATTTGCTCTTTGCTGCATAATTCCTGTCCTATACAGACAGATATTCTTATGGGTGCTGGAAATCCTTGAAAATACTTGAATAAATGTAATTGTTGCTGTCTTAATATGTTAATTAATCTGTTAAACTTTAAATAACAAAAAATCATTATATTTTTGCATAAAATGAAAGCTCTGGAGTCTGCGCATGTGTATGTAGGTGATCTGCCTTTTCTATCTGTACCTTTTGATTCAACAGTGTGAGATTACAAAATGCATGAAGATGATTGCTTCATGAATAAAATTAATATCAATTTTAGATAATACATGACATATTAAAGATGTGAGCCAATGGAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa5841
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000080770 Nonsense 336 1135 2 17
Genomic Location (Zv9):
Chromosome 11 (position 18278336)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 17644172
GRCz11 11 17778807
KASP Assay ID:
554-3891.1 (used for ordering genotyping assays)
KASP Sequence:
CAGCTTCTCTCCGCTTCAACATGCAGCGACTTCCCTCGYCTGGATGAATA[T/A]CCCAAACTCACTGAAAGCTGCGGCTCCTCATCTGATGCTTTTGAGCGCAT
Long Flanking Sequence:
GTGGAAGAGCAGATGCAACCAGAACTGGGTATTCCTGCTTCAGGTGTTGCACCAGAACAAGCTGTAGAACAGGAGTCGATCGAGGACCAAACAGAGTCAGATGGTTTGGTTTTAACTTTAGATGTTCCACTCACAAATGTACCTTCATTTTCCTCAGAGGGTGAATCTGTTGATTCGTTTGATCCACCTTTGAACGTCGAGACCAAAAATCCAGATAAAACCCTGCCTGTCCCTCCTAAAGAAATTATTTTAGAATCCAAAGATGCTAAATCAGAGGACAGACAAAGCGACACCCCTTCTCCTCCTGTTAGTGCCTTCTCCTCTGGAACTTCCACTACCAGCGACATTGAGGTTTTGGACCATGAGAGTGTGCTGAGCGAGAGCTCGGCCAGCTCCAGACAGGAAACAGCTGAGGCTAAAGCAGGTCTGCACCTGATGCAAGGCTCATTCCAGCTTCTCTCCGCTTCAACATGCAGCGACTTCCCTCGCCTGGATGAATA[T/A]CCCAAACTCACTGAAAGCTGCGGCTCCTCATCTGATGCTTTTGAGCGCATTGACTCGTTTAGCGTGCAGTCGCTGGACAGCCGCAGTGTCAGTGAAGTGAATTCTGATGATGAGATCCCAGGGAACCGTACATTGGCCTCCATCACAGCTGGACCTTTGCCTGCTCCGGCTGAGTCTGTGCCACAGACAAAACAGGAGGAAGAGGAGGGTATGATTGAGTCAATGAATGACCAATCGCTGGATGACAATGAGATGGAGGAAAGTGGCCGCAGTGCAACACCAGTGAACTGTGAGCAGGTAGATGAATTACAAGAAGTCGACCAGGAACCTGAACCTGACCTCACAATGTCCAGTCAAAAAATCGATGTACATGAAACTGTAACACCACTGAGTACTGAAGAAAAACCTGGAGATTCACCCTTCCAGATTTCAGAGCTCCAAAAGGTTGTATTATATTATATTATTCATTCATTCTTTCATTAATTTTCTTGTTGGCTTAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9263
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000080770 Nonsense 500 1135 3 17
Genomic Location (Zv9):
Chromosome 11 (position 18274474)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 17640310
GRCz11 11 17774945
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCAGATTATTGAGGAGCTCTCTGGCMGATTGGAAAAGAGAGAATCACAGT[T/A]GCTTGCGGTCAGTAAAGACAAGGCYAGRCYTGAGGAGGAGTGTGACAATC
Long Flanking Sequence:
TATAATAAATGAGAGACTTTCTTTGCTTATCAAATGGCTGGATCTAATTGGATTTGCATTGTAAACAGTAACTACAAGTTTAAAATGTATTACTTTTTATTTCATATATTAAGTTTTTAGTTATAATACATAAAAAATCATTCCGCATAAACTTTTACAAAATTCTGCACTGAAATAGCAAAAAATGTCAGCAGATTCGGTCTGGCCTTAGTGATAATATACCATTTGAGAATGTGTACACATTTTTCAGAATGAATAGAAAATAGACTTCCAGTGGGACCAAGTTTGCAGGTAACCACGTTTGCCACTGAATCTACCTAAATTTTTGAAGTTGGGAGCACCAGTGCTACCAAGCAAAAACAATAATTTTAAGTCCTGTATATGTATATGAATTTTTTTTAAATGATGAAATTTATATTTTTTTTCTGTTATTGTTCTCTTTCCTCATCTCCAGATTATTGAGGAGCTCTCTGGCCGATTGGAAAAGAGAGAATCACAGT[T/A]GCTTGCGGTCAGTAAAGACAAGGCCAGACTTGAGGAGGAGTGTGACAATCTCAAAGAGTAAGTTAAACCTGTGCTCCAGAAAACAATCTGCTCTCCTATGTTTTCTAAAATGATACATGCTTTCACTAGCTAATTAGGGAAACGACAGTATTTGTACAGCTTGATGCCGGATGCTGTGCTCACATACTGTTGACAAAGGATTAGCTTACAAAAAATGTAAAAACCTACACATCTTTTAGCAAGGACATGGCACAAAAAAGCTATTATGTTTTGAAAAATGTGGAAAAATATTAAAAAGCTTTCATTAACATGGGTTTTTAATATTTTTTCCACATATTTTGATTGCCTTGGACTTTCTTTTGCTGTTTATTCTGATAAATCTCTTACCCAAAGAGCAGCAATACATTAATTAAGCTACCCCTTTAGCATGTTTTGTTTGATTTTGAGTAATTATTTCTTATTGGGCAGATAATTCTCTTGCATGATGTGTAGGGATGCAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41805
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000080770 Essential Splice Site 954 1135 13 17
Genomic Location (Zv9):
Chromosome 11 (position 18263366)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 17629202
GRCz11 11 17763837
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACAGGAGAAGAAGAAATGCTACCTTGCACAAGAGGCCCTCAAAGAAAAG[G/A]TTTTGCATGCAAAATAATTTTCATCAGTAATTTTCAAATTTTCAATCAGT
Long Flanking Sequence:
TAAAGAATGAGCCTCCTCCAATCTGCCTTTACTTTCACTTTCTGTTTTACTTGGATAAGGAAATGTGTTGTAGGCACATACATTAGCCTACATAATTAATTTAGTTTAAGCGCAAAGATTTGTTTCAAAACTATTTCTAAATTCAGTTGTAATTTCCCAATAATAGAAAAAGAACAATAGAACAACTTGTAATTAATAACTAAAAAAAAGCCCCCCGAGATGAAGACAAGATTGAAAACAAATAGATTTTGTTTTAAAGATCACGAACCACATTTCTCAATGTATAAACATGCACAGATTACATCTTGAGCTTAAGATTACAATGTGTACTAAAAAAATATATTGTTGTTCATTTTGATTTCACGTGGACTTTAATCTCAGTATCTGTATTGTTTGCTCCTCTTCAGTTGCTTCTCACTAACCAACTCGAAATGGAGAAAATGAAGGTGGAACAGGAGAAGAAGAAATGCTACCTTGCACAAGAGGCCCTCAAAGAAAAG[G/A]TTTTGCATGCAAAATAATTTTCATCAGTAATTTTCAAATTTTCAATCAGTACTTTATGAAAACAAAAAGCCAAACACAATGACAATAACTGTTGTTGTAAAGTTTCAGAAGTCTGACATAAAGGTTCTCTGTTTTACCAGGAGAGGAAGTCTCATCAGTCTGTGACTGATGCTCCAGCTTCCTCCACTCCTTCACTGTCCCGCTCCAGTTCTGTTAGTGGAGCCGATCATGCCGGATTACCTTCCTCCTTCTTCTCACAGGTACTTTTTGAGATGCTTGAATTTTTTTCTTCTTCTCAAAGTCTGGTCCTACTTCAGCTGCAATGTGTGGTTTTTGCAGCAGGAGGACTCGCTGGACCATTCTTTCAACACTATGACCATGTCCATCAGCGGGACTAACCTGTATGAAGCGGCTCGTCTGGGTGGTGGATCCAGTGTCATTGAGAGCCTACAGTCTCAGCTCAAGCTCAGAGAGGGTGAAATAACACAGCTGCAGGTATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12876
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000080770 Essential Splice Site 1088 1135 16 17
Genomic Location (Zv9):
Chromosome 11 (position 18262613)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 17628449
GRCz11 11 17763084
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATGGAGAGTAAAGTGAAGGAAATCCCTAGGCTGAAAGTGCAACTGAAGG[T/C]GAACCACDTGCAAATCTACTAACAGATTANNNCAACTTGTTATCTTTGTG
Long Flanking Sequence:
TCTCACAGGTACTTTTTGAGATGCTTGAATTTTTTTCTTCTTCTCAAAGTCTGGTCCTACTTCAGCTGCAATGTGTGGTTTTTGCAGCAGGAGGACTCGCTGGACCATTCTTTCAACACTATGACCATGTCCATCAGCGGGACTAACCTGTATGAAGCGGCTCGTCTGGGTGGTGGATCCAGTGTCATTGAGAGCCTACAGTCTCAGCTCAAGCTCAGAGAGGGTGAAATAACACAGCTGCAGGTATGACCGGCATTTCAACAGAACAATTCTTTTTCAAATTACAAGTACATAATGAGTTATTTACCTTTGTATTTAGAAATACAGTATTTTATTTACTAATTTGTGTTAACCACTTTTGGTCTTCTACAAGATGGAGATTGCTAGTCTAGAGCGAAGTCGCACTGTGATGTCAGAAGAGCTGATCCGATTGACCAATGAGAACGATGAAATGGAGAGTAAAGTGAAGGAAATCCCTAGGCTGAAAGTGCAACTGAAGG[T/C]GAACCACATGCAAATCTACTAACAGATTATTACAACTTGTTATCTTTGTGCATAAGATGCATATATTTGATCCTAAAGATGCTAACTTTAAAAATTTTAATTATTTAAATATGATTAAGCATGATGAGCTTTTCACACGAAAAGATTGCTGTGAATCAAGCATGTCATGAGGCTATTCTTTAGTTACAGCTTTGTGATATGATGCTATTGTTTTGTTTTCACACAGGTTATATAAATAATAAAAATATTGACCAACTGTATGACTACCTCATAGTACTTGGCAAAATATTTTACTTCCATTATTTATTTGGCAAGTTTTAATTTTAGGTTCTATATATGTGTGAACAGTAACTGTAAAAGGAGCAGTTTTGCTATTATTTCATATTTAAAAATTTATTTAAAATAGCAATAGATTAATAAAACCATTCATGTTTTTGTGGTATTATTTATTGTATTTAAATGAGTATCTCACTCTCACCATGGCTGCAATCATTTGATCA
Associated Phenotype:
Not determined