Busch Lab

ZMP

nrxn3a

Ensembl ID:
ENSDARG00000043746
ZFIN IDs:
ZDB-GENE-070206-9, ZDB-GENE-070206-9, ZDB-GENE-070206-9
Description:
neurexin 3a [Source:RefSeq peptide;Acc:NP_001073478]
Human Orthologue:
NRXN3
Human Description:
neurexin 3 [Source:HGNC Symbol;Acc:8010]
Mouse Orthologue:
Nrxn3
Mouse Description:
neurexin III Gene [Source:MGI Symbol;Acc:MGI:1096389]

Alleles

There are 11 alleles of this gene:

Allele Name Consequence Status Availability
sa18056 Nonsense Available for shipment Available now
sa14031 Nonsense Available for shipment Available now
sa11330 Nonsense Available for shipment Available now
sa32142 Essential Splice Site Available for shipment Available now
sa36372 Essential Splice Site Available for shipment Available now
sa23034 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa18056
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000064241 None None 672 None 17
ENSDART00000088179 Nonsense 150 1697 1 33
ENSDART00000109034 Nonsense 150 261 2 2
Genomic Location (Zv9):
Chromosome 17 (position 17271147)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 17421158
GRCz11 17 17440994
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGAGGCAGTACATGAAGATCGTTAGTGACCTCTTCCTGGGCGGAGTCCCT[C/T]AAGATATTCGCATTTCTGTGCTCACTCTCCCGACAGTGAAGGATCTTCCG
Long Flanking Sequence:
CAATGATTTCCTTCTGTTCAGGATAATAACCCCAAATCTCCAGCACTTTTACAATGAATTTCTTCAGATTTCCAGTCCAGTTGCAGCTGCTGATCAGTACTGTGCTTGGGCCCTGCTTGGGCCTGGAGTTTACAGGGTTGCAAGGCCAGTGGGCACGCTATCTCCGCTGGGACGCCAGCACCAGAAGTGACCTCAGCTTCCAGTTCAAAACAGACGTGTCCACTGCCTTAATCCTGTACTTTGACGATGGCGGCTTCTGCGACTTCCTGCAACTCATGGTGGTTGAGGGGAAGCTCCAATTGCAGTTTAGCATTGACTGCGCCGAGACCACTGTTGTATCGGACAAGCGAGTCAATGACAGCAGCTGGCATTCTGCCACCCTGAGCAGGTACAACCTGAGAACTGTGCTGGGTCTGGATGGAGTGAGCAAATGGGCCGAAGTGCGGCCACTGAGGCAGTACATGAAGATCGTTAGTGACCTCTTCCTGGGCGGAGTCCCT[C/T]AAGATATTCGCATTTCTGTGCTCACTCTCCCGACAGTGAAGGATCTTCCGCCGTTTAAGGGAATTATCAGGGAACTGAAGTACAATAGCAAGGAACCTATTCTACTTAGCAGCCAGAGGGTCCGCATGGACATCGAGGGGATCTGCATGGAGAACCCATGCGAAAACGGAGGGACGTGCTCTGTTGTAGATGGGGAACCACTTTGTGATTGTTCTAAGACGGAATATGTTGGCCGATTCTGCAACGAAGGTAAATATATGGTTTATATATCAAAGCAGATACAGTGTAAAATCTTTAAATTTATTGGCAAAGGTCTAACTCTACTTGCTGAAATGTGAATAATGCTTACCAGAATCCTACATCCTCAGCTGCTCCATGCTACTGAAGTTTGATTCTGAGGTCCTGGTTAATGACATCTCTTAACTTGCCTACAGAAAGCTGCCCTGTTCTGTGCATTTGGCAGGTGTTATTGTGCAGGGAAATTCTTGATCTGCCACCTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14031
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000064241 None None 672 None 17
ENSDART00000088179 None None 1697 None 33
ENSDART00000109034 Nonsense 238 261 2 2
Genomic Location (Zv9):
Chromosome 17 (position 17270881)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 17420892
GRCz11 17 17440728
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGACGGAATATGTTGGCCGATTCTGCAACGAAGGTAAATATATGGTTTA[T/A]ATATCAAAGCAGATACAGTGTAAAATCTTTAAATTTATTGGCAAAGGTCT
Long Flanking Sequence:
CTGCAACTCATGGTGGTTGAGGGGAAGCTCCAATTGCAGTTTAGCATTGACTGCGCCGAGACCACTGTTGTATCGGACAAGCGAGTCAATGACAGCAGCTGGCATTCTGCCACCCTGAGCAGGTACAACCTGAGAACTGTGCTGGGTCTGGATGGAGTGAGCAAATGGGCCGAAGTGCGGCCACTGAGGCAGTACATGAAGATCGTTAGTGACCTCTTCCTGGGCGGAGTCCCTCAAGATATTCGCATTTCTGTGCTCACTCTCCCGACAGTGAAGGATCTTCCGCCGTTTAAGGGAATTATCAGGGAACTGAAGTACAATAGCAAGGAACCTATTCTACTTAGCAGCCAGAGGGTCCGCATGGACATCGAGGGGATCTGCATGGAGAACCCATGCGAAAACGGAGGGACGTGCTCTGTTGTAGATGGGGAACCACTTTGTGATTGTTCTAAGACGGAATATGTTGGCCGATTCTGCAACGAAGGTAAATATATGGTTTA[T/A]ATATCAAAGCAGATACAGTGTAAAATCTTTAAATTTATTGGCAAAGGTCTAACTCTACTTGCTGAAATGTGAATAATGCTTACCAGAATCCTACATCCTCAGCTGCTCCATGCTACTGAAGTTTGATTCTGAGGTCCTGGTTAATGACATCTCTTAACTTGCCTACAGAAAGCTGCCCTGTTCTGTGCATTTGGCAGGTGTTATTGTGCAGGGAAATTCTTGATCTGCCACCTCTATTCCCCCATCGCTTCTTACGATCAATTGAAATCGAATGTCATTGAAATGCTCTACTAGCAAAGCCTACGTTTTTACCTCTGTAAAGCACTAAGCTGTTTGTTTCTGGCAAGCGTTTTGCGGTTATGTGTGTGTGTGTGTTAATCGCACCCTGCTGAGGAGGTGGGGTGTTACGAGGATGTTAAGGTGCCTTTTCAGATCCCTTGGTTGTTTTTCTGAAGTGGCCATTTTAGTTTCTCTGGGGATTTGAGGAGGCCATTTCACAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11330
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000064241 None None 672 None 17
ENSDART00000088179 Nonsense 455 1697 8 33
ENSDART00000109034 None None 261 None 2
Genomic Location (Zv9):
Chromosome 17 (position 17148445)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 17298456
GRCz11 17 17318292
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CGCATTGTGGACCCCAAGATGAAGATMCAGGGCGATGTGGTGTTCAAGTG[T/A]GAAAACGTGGCAACGCTGGATCCRATTTCGTTCGAGACGCCTGAGGCCTA
Long Flanking Sequence:
ACGCAGCTGTAGTCTCAAATATGTAACAAAATGTAGCAACGTATTTCAAGTTTATATAATTAGGTCAAGCATGTATCTTAAATGAGCAATTTTTATAATCCATGTAATTTCTTTACATCTTTGTGTTTTCATTTAGTGTTTGTTTTTAATTTAAATTTTAGATGTGATATCATTAAATATGCATAAAACATGGATGGAAATGAAGAGGTAATAAAAAAAAAATCATTTTCTGCTTCTATCCAGTATGCCTTTTTTAAATTTCATTTATTCATGTAACATATGTTCACACAAAAAACTATATATAAAAAAAAGATTTATGAACATTTTAAATGAGTTGTCAGGTTTTGCAAATGAACTCTTTAAAAGGAGCAATTGAGTGATTCTTTGCTTGCATCCACGCAGGTTGTTTACAAAAACAATGACATCCGGCTGGAGCTGTCCCGGCTCGCCCGCATTGTGGACCCCAAGATGAAGATCCAGGGCGATGTGGTGTTCAAGTG[T/A]GAAAACGTGGCAACGCTGGATCCGATTTCGTTCGAGACGCCTGAGGCCTACATCAGCCTGCCTAAGTGGAACACCAAACGCATGGGCTCCATCTCTTTTGACTTCCGCACCACCGAACCCAACGGCCTTATTCTCTTCACCCACGGCAAGCCACAGGAGAGAAAGGACGCCCGCAGCCAGAAGAACACAAAAGTGGACTTCTTTGCCGTGGAGCTGCTGGATGGAAGTCTGTACTTGCTGCTGGATATGGGCTCTGGGACAATCAAAGTGAAAGCCACACAGAACAAGGTGAACGACGGGGCCTGGTACCATGTGGACATCCAGAGAGATGGAAGATCAGGTCAGTTACACACACTTAAAGGGGCTTTTTACAAGATGTTGAAATTATTAAATGGTTGTGACTTTTTTTATTAAACATTCAGATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATGTTTTTGTATTTTATAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32142
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000064241 None None 672 None 17
ENSDART00000088179 Essential Splice Site 696 1697 9 33
ENSDART00000109034 None None 261 None 2
Genomic Location (Zv9):
Chromosome 17 (position 17143314)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 17293325
GRCz11 17 17313161
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATCTGTGACTGCACAGGCACTGGTTACTGGTCCCGCACCTGCGAGAGGG[G/A]TGAGTTCACTGATTTTACACTTACAAGCCTGGATTTATGGAGTTTGGGTG
Long Flanking Sequence:
AACAGAAATAATCTTTTGTTTGATTTTTCAGTTAAAAAGTTCTTCAGTTCATGCGACAAAACTTCTTTTAAGTTTTATGATTGAAAGTTTAGTGCATTTTTGGTCTTTTTTTCCAGGCACCATATCAGTAAACAGCCGCCGCACTCCTTTCACTGCCAGTGGGGAAAATGAGATTCTGGACCTGGAGGGTGACATGTACTTAGGCGGCCTTCCTGACAGCCGGGGTAGTCTCATCCTGCCCACCGAACTGTGGACCGCCATGTTGAACTACGGCTATGTGGGCTGCATTCGGGACCTGTTCATTGATGGTCGCAGTAAAGACATCCGGCAGATCGCTGAGGCCCAGAACGGAGCAGGCATCAAACCATCCTGCAACAAGATGTCAGGCAAACAGTGCGACAGTTACCCATGCAAAAACAAAGGCTTGTGCAAAGAAGGCTGGAATCGGTTTATCTGTGACTGCACAGGCACTGGTTACTGGTCCCGCACCTGCGAGAGGG[G/A]TGAGTTCACTGATTTTACACTTACAAGCCTGGATTTATGGAGTTTGGGTGCAAGAATAAACCCAAGTGTTGGGGTTAATAGGGATAGTTCACCCAAAAATGAAAATTTTGTCATCATTTAGTTACTCTTGACTTGTTCAAAACCTATTTGAACTTCTCTCTTTTGTTAAACATAAAAGAAGATATTTTTAAAAAGGCTGGTTGTTGAGATCCATTGAAGTCCAATGTATTTTTTTTTACTACTGTGGAAATTAATGTTTTTTTCTTCTTCCTTTCTTCATGTTCAACAGAAGAAAGAAATTTATATAGGTTTAAAATCACATGAGGGAGAGTAGATGATGAGGTAATTAAAATTTTTGGGTCCTGATGGTTTTTAAAGATGGATTTGTTCATACATAATTTGTCTGATTTTACAAAACATTTTATTCCACTCCAATTAGCTGTTCTCAGTATTTTCAGAATTATAGATGATAAAAAGATAACACCCCACTATGTTTTTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36372
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000064241 Essential Splice Site 87 672 1 17
ENSDART00000088179 None None 1697 None 33
ENSDART00000109034 None None 261 None 2
Genomic Location (Zv9):
Chromosome 17 (position 16960231)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 17110242
GRCz11 17 17130078
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACCCATTTCCATATACCGCTCTCCAGCGTTTCTTAGAAGCGGACATGG[T/C]GAGTTTGCATGGAGTTGTACCATTTGAGAAGACTTGCTTGCTGTTAATTG
Long Flanking Sequence:
TGTCGCCTCTTCAGGTCTTGCGAGTGACTGGTCGCAGACGCTCCTGCTATCCATCTATTCGCTCAGCAGCTGTAAAGGGCTCTCGTCCTTAAGTGAGTGCATTTTCAGAGGGGTCGGTTGTGAGGGTGCTGCTGGAACGAGGAGCTCGGGACTCCTAGCATGGGGTTTTCTGCATCATGAGAGAACTCTCCTCTTTCGGTACTTCGCGCCTAGTGTCTAAGTGTGAGTCGGGTGTGCGTTATGCGTCCCAGCAGAGTGGCGGCGCCGTTTCGGGGCGGTCGCCAGGGATTGAGCCCATGGATGTGGTCTCTGACTTTGGGATGTATTGTGGGTTCGGTGTGGAGTTCCTCACCTGGCTTGGATAATTCAGTGGTCGCCGCTGGACCTCCTGGGGTGGCAACTTCATACACCCATCCTGAACACCCGGTCCACAACCCTCGGCACCACGCTTCACCCATTTCCATATACCGCTCTCCAGCGTTTCTTAGAAGCGGACATGG[T/C]GAGTTTGCATGGAGTTGTACCATTTGAGAAGACTTGCTTGCTGTTAATTGCGATAGGGGAATAATAATTGGGATTTCGTTTATTGAGGGGAAGATTGTGTCAGATGTTCTCAATAGCGTTTATCCAGCTTGGTATCTGTGCTCGGAGTTTAATTAAAGACGGGAAGATAGCGCATCGGAGGGGCTATAATAAGTCTGGCTTTAGATTGGAATTTTGGAACAAGGGGGATCTGATAAGTGTTGAGCTATTTTGTGGTTACGGAGAGAGGAGTTCTGTCTCCCAAGGCACACAGGCAATTACCCTATTAAAGTCTAAAGCGAGCAGCCGAAACTGTGCTGTGGTGTGATTGCTCTTTTGCTGTGGCTCAGTGTCAACAAATCTAAGGTAGAGCTTGGATTGCAGTGGTTTTAAAAAACAAAATAAATCATTAGAAAAGTTGCCAGGTGTGTTTTATGTGCCCAATGAGAAGATGAACTTTGAGCGAAAACGTGTAGATGTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23034
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000064241 Nonsense 352 672 16 17
ENSDART00000088179 Nonsense 1377 1697 32 33
ENSDART00000109034 None None 261 None 2
Genomic Location (Zv9):
Chromosome 17 (position 16768421)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 16919249
GRCz11 17 16927182
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTAGACCACGGATGACATGGTTTCGTCGGCCGAGTGTTCCAGTGACGAC[G/T]AGGACTTTGCGGAGTGCGAAGGACATGCAGGTGGGCTAGGTCAGTTCACT
Long Flanking Sequence:
ACTAGATCGTATGCGACTGGCCGACCGGATATGATGTACTCCAGTCCAAGCAAGTCCGTGCACTCAAGATGAGAATTAGTAGTTTTTTTTTCTTGTTATTTTTTTGTCAAAAAATCTATATAAATAAAATTCTGTTCATAAATGAGTAATAAGGAGTTCTCTCTACAATCCCTCCAAAATATTTACTCTACAAACCTGTGCGACTGCCACAAGGGGGCGTATTTCATGTCGTGTTTGAATGTTGTTTGCAGTGGGAAGGTGGCTTATGTATGTATGCATATGTTTGGTCAGTGTTTTTAGTCACTTTAAAATTCCAATTTAGTTGGTTAAGTAACAAACAAAAATTGTTTTATCGTTCTCCAGTGTGCCTTACATTAAAGTCATTGTGCAATCTAGCACATTCAAGTCTCTCTTTTGTTTGTCTATTGTCCCGTTTTTCTGTCTGTGTGTTGTAGACCACGGATGACATGGTTTCGTCGGCCGAGTGTTCCAGTGACGAC[G/T]AGGACTTTGCGGAGTGCGAAGGACATGCAGGTGGGCTAGGTCAGTTCACTTTTGCTTGCCTCTATGTGGTGGCCTTTCATTTGCAACTGAGGATCAGATCCTCAAAGCATCGCCTTCCCCCCATGGATAGAAAAAGTGTAACTTACTGCCTAATCCAAGCCATGCAGATCAATATAGAGCACTGATATAGCAGGATATCACTTGAGAAATAACAGAAACTGTAAACTAATGCTAAGTCCATTCAGTATCCTTGAATCAGAGTTAATGTCAAATCATTCCACCAAACTTTGAATACGAGCTACACTTGGCCATGGGGTTTTCCGAAGTGGTTAACATGGTCACACTGATTACTAATTTTGTCCCCAGTGCCTATAATGAGAGCATACGCACAAAATTAGTACAGAAACGTGACATGTTCTCTGCATTGATGCTTCAAAATGTATCATCTTGAGGTTTTTCTGCCTTGTGATAGTGATAGTGGACTGCATTTTGCCACATGA
Associated Phenotype:
Not determined