ZMP
si:dkey-254e1.1
Ensembl ID:
ZFIN ID:
Human Orthologue:
TTC18
Human Description:
tetratricopeptide repeat domain 18 [Source:HGNC Symbol;Acc:30726]
Mouse Orthologue:
Ttc18
Mouse Description:
tetratricopeptide repeat domain 18 Gene [Source:MGI Symbol;Acc:MGI:1923920]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa9230 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa504 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa9230
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081374 | Essential Splice Site | 118 | 1050 | 4 | 26 |
| ENSDART00000132238 | Essential Splice Site | 36 | 968 | 2 | 24 |
Genomic Location (Zv9):
Chromosome 3 (position 13049287)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 12081512 |
| GRCz11 | 3 | 12021712 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTAAACTTAACACATTAKTATTGATCCTCATGTTTGATATCTTATTCTA[G/T]GWCAATGTAACTTCTCCTCCAYTGTGCTCCTTCATGCCGTGACTGGATCT
Long Flanking Sequence:
GATAGATAGATAGATATATTTAGTGCCATCTTCAAAAATTATCATTTCAATTTGCTTATTTTAATTGCATTTAATGTGACATAACCTGTTACATATACTTAGGAGCTTAAGAAACATCTTTTCACAAGACAATTTCAGACAGCACTTACAGGCTTTTGCATCTAAACTGTAATTTAAATACAACATTTAATTAACTATTTTTCCATCTATTTGTATTTATCCATCCATTCATGTATACTACAGCCTTTACACCTATTAAGCAAAGTGTCATACAGTTTAATTATTCACGGCAAATGTAAGCAGAAATGTTTGTTTATCCTCAGTGACGGTGCTTGAGATCCTACCAAAAGAGAAAAAACAAAAAGAAGAGAAAACCGCTGCATTAGGACAAGCCAGTGTGGACCTGTTGCCTCTGCTACGAGGTTAAACCATTGCATTTTAATCCTTTCATTTAAACTTAACACATTATTATTGATCCTCATGTTTGATATCTTATTCTA[G/T]GTCAATGTAACTTCTCCTCCACTGTGCTCCTTCATGCCGTGACTGGATCTCCAGCTGATGTTGCCTTACGTGAAGATGGCACAAAAGTAAGTTATTGGCTGTATCCAAATTTAATACCTTTAAATAGTGCACGGCAGCGCTGTGGGTAACGATTTCACCTCACACCAAGAAGGTCGCTGGATCGAGCCTCTGCTGGGTCAGTTAGCATTTCTGTGTGATGTTTGCATGTTCTCCCCATGTTGGTGTGGGTTTCCTCCGGGTGCTCCAGTTTCCCCCACAGTCTAAACACATGTGGTATAGGTGAATTTGGAAAGCTAAATTGTTTATAGTGTGTATGTAAATGAGTGTGAATGGATGTTTCCAAATGATAGGCTGCAGCTGGAAGGGCATCCGCTGCGTAAAATATATGCTGGATACGTAAGCGGTTCATTCCACTGTGGCGATCCCTGATGAATAAAAAGACTAAGCCGAAGGAAAATTAATGAATGAATGAATAGTAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa504
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081374 | Nonsense | 457 | 1050 | 12 | 26 |
| ENSDART00000132238 | Nonsense | 375 | 968 | 10 | 24 |
Genomic Location (Zv9):
Chromosome 3 (position 13036845)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 12069070 |
| GRCz11 | 3 | 12009270 |
KASP Assay ID:
554-0223.1 (used for ordering genotyping assays)
KASP Sequence:
TGAAAACACTCTTGTTATAGAGTGAATTTTTTATTATCCTCTCAGATGTA[C/A]GCCGATTCAAGATCATACATTATTATCGACATTTTTGTGGAAAAGCCACT
Long Flanking Sequence:
CAGTCCAAAGACATGCGCTATAGGTGAATTGGGTAAGCTAAATTGGCTGTAGTGTATGAGTGTGTGTGTGAATGTGAGAGTGTTTCCCTGTACTGGGTTGCGGTTGGAAGGGCATCCACTGTGTAAAACATATGCTGGAATGGTTGGTGGTTTATTCTGCTGGGGCGACCCCTGATAAATAAGGAACTAAGCCAAAGGAAAATGAATGAATTAATATTTACTGTATTTTGAAGTGCCAACTATATCAATATTGTGCATGTTCATTATCGCGATGTATTGAATTATTGAATATCGGCGTATATGTCTATCATACTTTTTTTTTATAGCCGGATTCTCAGGGAAAACCAGCTCAGGCTGAGAATGTGAATGGACAGGAGCAACAGGTGAACACAGAGGGCCAGGTAAGCTCCCCTGTCAATCAAACAAACATCAGAGTAAAACAGAGAAGTGTGAAAACACTCTTGTTATAGAGTGAATTTTTTATTATCCTCTCAGATGTA[C/A]GCCGATTCAAGATCATACATTATTATCGACATTTTTGTGGAAAAGCCACTGGTTCCAAAGAGACCACCGGAGGAGCTGGCCAAACGGTAACAGAAAGACTTTCATTCACAGTCAGAGCATTGGTTTGTCTTCAGATATGCCTGAAATGTGCTTCACAATGAAAGATTATTATGTGTGGTGCAGTGTGATGGAGCTGGTTCCACCAAGACCTCCTCTGCCTCGACGGCCAGCAGGAGCAGAACGAGTAAGAGATACGTTTCATCTTGTTTTTTAATATCCCTGTCATGTGTTCCTCTCACTGTCACATCTATGCGAAAATCATTTATCTAAAACAGTTTACACAAGGCCATATTTCACTTCACAAAAATATGAACTTTAACTTTTTCCCAGTACTGGGTTGCAGCTGGAAGGGCATCCTCTGCGTAAAACATATGTTGGAATAGTTGTCGGTTCATTCTGCTGTGGTGACCCCTGATTAAGGGAAGGCCGAAGGTAATGAA
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |