ZMP
gtdc1
Ensembl ID:
ZFIN ID:
Description:
Glycosyltransferase-like domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q568B7]
Human Orthologue:
GTDC1
Human Description:
glycosyltransferase-like domain containing 1 [Source:HGNC Symbol;Acc:20887]
Mouse Orthologue:
Gtdc1
Mouse Description:
glycosyltransferase-like domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:2444269]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa9220 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa10288 | Essential Splice Site | Available for shipment | Available now |
| sa34657 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa9220
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000024572 | Essential Splice Site | 174 | 433 | 4 | 11 |
| ENSDART00000127135 | Essential Splice Site | 174 | 433 | 3 | 10 |
| ENSDART00000024572 | Essential Splice Site | 174 | 433 | 4 | 11 |
| ENSDART00000127135 | Essential Splice Site | 174 | 433 | 3 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 26904582)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 26060368 |
| GRCz11 | 9 | 25871237 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCCAAGTGTCACGTCCTCCACTTCCCCATTCGCTTTCCCGATGTCACAAG[G/A]TCTGTCCTTACATCCCTCACCACAGCCTTCCAGGGATCACTCCTCCACTG
Long Flanking Sequence:
TTCATGACTACAGACAAAGCAGAATAATATAATAAGAAAAAATCAGTTTGCAACATCAAGCAGCATAGCATGCTGTTTTTAATGTCTAAAAATTAATAGAAGTTAATGAAACTTTATATGTAAAGAATAAGGTCAATACCGCATGTCTTTGGACTGTAGGGGAAACTGGAGCACCTGGTGGAAACCTATGCAAACATTGGGAGAACATGCAAACTCCACACAGAAATGCCAACTGACCTAACTGGGACTCGAACCAGCGACCTTTTGCAACAGTGCTAACCAATTTTTCTTCTTTGATCATCTAAAAGGACTTTTTTTTCCCACAGCCTGGTTGCGGATGTGGTGGTGTTCAACTCCTCGTTTAACATGGAATCCTTTCTCTCGTCCATCTCCACCTTCATGAAGACCATGCCTGACCATCGGCCCAAAGATCTGGAGCGGCTCATCCGTCCCAAGTGTCACGTCCTCCACTTCCCCATTCGCTTTCCCGATGTCACAAG[G/A]TCTGTCCTTACATCCCTCACCACAGCCTTCCAGGGATCACTCCTCCACTGATTAAAAAATTCGCTTGCGAGTTCACTCTTAATCCGCCCCCAAAAGCTGATCGCGTATGCAAGCGTGGTTAATGGCGAGTGGGCAAAGTTGTGTAAGAAAGTGATTAGAATAGACAGCTTTAATATCCTGTGTGGATCACTTGACACGCTCCGGCTACAGATACGTGCTTGTGCTCGGGCGAACATGCACACACATACACAACATGCCCATTGGGACAGGAAGCGATTTCTTTGTGCCGTAGTCTGTTTGACTGTAGATATTTGTGTTTGATTTTTGGAGCAGGCCATGATGTAGTATCAAAATTAGGGAGGATTTTTTTTTACTCGGGGCGTTTCATCTGCAGCAAATGGCAAGCAAATCAAACTGATATTCAAATAGAGTTTTATTGGACAGGTTATTAAAATTCACCTCATTTCCAAAAACAGAACGTAGTTGTATTTGTTTCTTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10288
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000024572 | Essential Splice Site | 174 | 433 | 4 | 11 |
| ENSDART00000127135 | Essential Splice Site | 174 | 433 | 3 | 10 |
| ENSDART00000024572 | Essential Splice Site | 174 | 433 | 4 | 11 |
| ENSDART00000127135 | Essential Splice Site | 174 | 433 | 3 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 26904582)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 26060368 |
| GRCz11 | 9 | 25871237 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCCAAGTGTCACGTCCTCCACTTCCCCATTCGCTTTCCCGATGTCACAAG[G/A]TCTGTCCTTACATCCCTCACCACAGCCTTCCAGGGATCACTCCTCCACTG
Long Flanking Sequence:
TTCATGACTACAGACAAAGCAGAATAATATAATAAGAAAAAATCAGTTTGCAACATCAAGCAGCATAGCATGCTGTTTTTAATGTCTAAAAATTAATAGAAGTTAATGAAACTTTATATGTAAAGAATAAGGTCAATACCGCATGTCTTTGGACTGTAGGGGAAACTGGAGCACCTGGTGGAAACCTATGCAAACATTGGGAGAACATGCAAACTCCACACAGAAATGCCAACTGACCTAACTGGGACTCGAACCAGCGACCTTTTGCAACAGTGCTAACCAATTTTTCTTCTTTGATCATCTAAAAGGACTTTTTTTTCCCACAGCCTGGTTGCGGATGTGGTGGTGTTCAACTCCTCGTTTAACATGGAATCCTTTCTCTCGTCCATCTCCACCTTCATGAAGACCATGCCTGACCATCGGCCCAAAGATCTGGAGCGGCTCATCCGTCCCAAGTGTCACGTCCTCCACTTCCCCATTCGCTTTCCCGATGTCACAAG[G/A]TCTGTCCTTACATCCCTCACCACAGCCTTCCAGGGATCACTCCTCCACTGATTAAAAAATTCGCTTGCGAGTTCACTCTTAATCCGCCCCCAAAAGCTGATCGCGTATGCAAGCGTGGTTAATGGCGAGTGGGCAAAGTTGTGTAAGAAAGTGATTAGAATAGACAGCTTTAATATCCTGTGTGGATCACTTGACACGCTCCGGCTACAGATACGTGCTTGTGCTCGGGCGAACATGCACACACATACACAACATGCCCATTGGGACAGGAAGCGATTTCTTTGTGCCGTAGTCTGTTTGACTGTAGATATTTGTGTTTGATTTTTGGAGCAGGCCATGATGTAGTATCAAAATTAGGGAGGATTTTTTTTTACTCGGGGCGTTTCATCTGCAGCAAATGGCAAGCAAATCAAACTGATATTCAAATAGAGTTTTATTGGACAGGTTATTAAAATTCACCTCATTTCCAAAAACAGAACGTAGTTGTATTTGTTTCTTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34657
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000024572 | Nonsense | 379 | 433 | 10 | 11 |
| ENSDART00000127135 | Nonsense | 379 | 433 | 9 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 26942374)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 26098160 |
| GRCz11 | 9 | 25909029 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAAATATGTATTTTCCTCTTGTAGCAACATATCTGTATTCAACACCTGAA[C/T]AGCTGTGCAAAAGACTACAGGAATTCTGCAAGCGTCCGCAATTAGCCAGA
Long Flanking Sequence:
CAATATATTTAGTCAATACAGTACAGATGCACTATGGAATTGAGCCCTACAGCATGTGTCATAAATCTTTTCTTTCAGGTTAGAAGCAGTGCATTGTGGATGTTACCCCCTGTGTCCGAAGGCTTTGGTCTACCCTGAAATATTCCCTGGTAAAATTCTTCTCTAATTTTCCTGATTTGTCTGTGAAGATAAAAGCAGCTTGATTTCACATGCAATAGAAGATTTATTGTCATAGGCAAAGCCGTTATGTTCAACTTCTGTATATAATGACTTATTCATCTTAAAGCACAATCGGAAGAATTTGCCATAAACTATTCTGGCATTTTTATATAAATAAATAAATATAACCACAGTTCAATAATGTACAGCATCACACAGCATGGTGTCAGCTGAATTTTTAATGCTGAAAGTGCCTGCTATCTCATCTGCTCTTTGAGGTTTCTTACTTATCAAATATGTATTTTCCTCTTGTAGCAACATATCTGTATTCAACACCTGAA[C/T]AGCTGTGCAAAAGACTACAGGAATTCTGCAAGCGTCCGCAATTAGCCAGACAACATGTTGTTCAGGTAAACAGTGCTCATTTTCCTGGAAATCAAATTGACTACAAAGACTTGGTTCTGGAATTGTGCATGAATACATTTTCATCAAGGCAAATACGTGCCAGTAAACATGATCAGTAATCAGTGCAAGTTAAACCTCTTACTGGAATCAGAGACTGTGTTTGCACCTGTTGTCGAAATGCATTGTCAGTTATTTAGTCAGTAGGGACACTTTACCTTTTCCAGTCGGTATTCAACTAGATAGTTTACTGTATACCCTCTGTAGAATCACACAAAATGACACACACATTTTTAATACTAGAAGATCCTTTCACGTGTTCAAAAGCACATTGGTTCTATTTGATTTTGTTGGCTTTAATTCTGTGAGGATTGTTTTTGTATTCACCTTAAAGATGCTGTATGTAAGTTTTTGACTCTTCTAAAGCATGAAAATATATTATG
Associated Phenotype:
Not determined