Busch Lab

ZMP

si:dkey-85a20.2

Ensembl ID:
ENSDARG00000079055
ZFIN ID:
ZDB-GENE-090313-346
Description:
Novel protein similar to H.sapiens TARBP1, TAR (HIV-1) RNA binding protein 1 (TARBP1) [Source:UniPro
Human Orthologue:
TARBP1
Human Description:
TAR (HIV-1) RNA binding protein 1 [Source:HGNC Symbol;Acc:11568]
Mouse Orthologue:
AC151908.1
Mouse Description:
TAR (HIV-1) RNA binding protein 1 [Source:RefSeq peptide;Acc:NP_001153379]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa22365 Nonsense Available for shipment Available now
sa18458 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa22365
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113259 Nonsense 199 1578 1 29
ENSDART00000132198 None None 396 None 10
ENSDART00000133636 None None 581 None 13
Genomic Location (Zv9):
Chromosome 13 (position 39837782)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 39151883
GRCz11 13 39277773
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTCAAGTCCTGCGGCGAAGATGCTGAATCGGAGGTCCTGCTTCAGATAT[G/A]GGATGATTTATTACGGTGGCATCAGAGAGATCAGACAGATACAGCATCCA
Long Flanking Sequence:
CACAGAGAAGATTGAAGCTCTAACTGTTTTGATCAAGGAGCTCTCCATTAAACCACAAGAAGAGCGCTTTATCCGTAAAATACAGTCAGTGTTATGGAATCAGTGCATGCCGGTAATACAAACCATCTTGAGATCAGAAGATGGAGGAAAGAATCTGCTCAATGCTGTCTGTGGACTGTTTGCAGTTTGTGTCAACGTTTGTCAGAGCAGCGATGTACCTGAGCAGATCCTTCAAGCTCTTCTACCTGTGCTGATGACGAAAGATGACGCCAACCATGAAGCCAATAGAGCTGACATTGAAGTCGCCATCGAAGCCATCGGAGTTTTGTTATCCAGCATCTCAAATGACAGGTCCATCATCTCCAGGACTCTTTCGAGCACCCTTAACTGTGTTAAACATCTATCTGACTCCATAATCTCCAAAATCATAGTGCGCATCTGGTTCACCATGCTCAAGTCCTGCGGCGAAGATGCTGAATCGGAGGTCCTGCTTCAGATAT[G/A]GGATGATTTATTACGGTGGCATCAGAGAGATCAGACAGATACAGCATCCACTCGGGTTTTGTTGTGTCTCACTGCTCTTTCTGACCATCTCTGCTCTTCTGAAACATCTCCAAACCGACCGGACCCTAGAAGGTCTCAGAGGTTCTTTAGGGCGGTTCAAGATGGATTGACGCACAGGGATAGTGTGACCCGCAAACGGGCGCTTTATTTGCTTACCAGGTGTGTGTCACTAGCAGAGATGAAGAAAGAAGAAGTGGTTAGCATTGAGGAACATGAAACAGGTGAGTCGATGTTGGATATCTGTCATATTGTCTGAGGTATTTTGTGATTTTTGTTTGTTAGTAAACTAGATTTTATTTGGCAGATGAAATCCTGTTCAGATGGACACCAGATAAACAGAAGCTGCTGAGGGAATTCTGGGAAGATTATGCTTTAGTTTTAGAGACTCTAGAGGAAAATCAGGTAAGGAGATTTCATGTGGAGCTTCAAATTGATGAAAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18458
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113259 Nonsense 393 1578 4 29
ENSDART00000132198 Nonsense 9 396 1 10
ENSDART00000133636 None None 581 None 13
Genomic Location (Zv9):
Chromosome 13 (position 39842510)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 39156611
GRCz11 13 39282501
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGTTCATCACCTGTTACAGCTGAAAGCRCTGCATCAGCCTGCTTTTGCTT[T/A]GGCCTTTTCACAGGTATCCTTYCTTCCTTCCTTTATTTYTTCCATCCACC
Long Flanking Sequence:
TGTCACTGCAAATACACAATGTTGCCAAAAGTTGTGGCGTTTGCATTAACAGATCCAAAATGATAACATGAGGAAAAACTAAAAAAATGTCCATAGAAACATACAAGGGTTAAATCAAAAGTTGATGCATGTGCAGTCCAGATCTTTATTAAAATATAATTTATTTTTTGTTATTGGTGTAGATATTCATTCAAACTGTTTCTTTTTCTTTTTCTCTCATATAAAGATTCATGTGATTCGACCTGTACTCAACAGAATAGACATGCTCGTTGAGACAACCACAACTGACATTCAAGGTTGGTCAGATTCCTTTATTGGGAGCACATGCAGGAATATGAGTTAGTCTGATTGTATCTCTCCATCCTCAGGAGGGCTGTTTTCTCCATCATGGCTGCTGTGTGTGTATCAGCGCATGTTTCACAGCGAGAACAAAGCCGTCATGAAGGAAGGAGTTCATCACCTGTTACAGCTGAAAGCACTGCATCAGCCTGCTTTTGCTT[T/A]GGCCTTTTCACAGGTATCCTTTCTTCCTTCCTTTATTTCTTCCATCCACCCTTTCACCGTCCATCCCCCCCATCCATCATTTTATCCTTCCTTTTATCCTTCCTTCTACCCTTTCATCTTCCATACACTTTCATCATCCATTCACCCTTCCTACTTTTATCTTTTCCTTTCATACATCATGTCATCCGTCCTTTTATCCATCCATCCATCCATCCTTCCTTCCACCTTTTCATCTATCGATCCACTCTTTTATCCATCCTTCCTTCCTTTCATTCTTCCTTTTATCTATCATTTTGTTCATTCATACGTTTTCATCCTTTCCTCCTTCCATCCTTCCTTTTGTCTATCCTTCTTCCTACCATCATTCTTTCCCACCATCCATCTTTTCATTCATCCTTCTTTTTATCCATTCATCCATCCATCCTTCCTTTCACCCTTTCGTCTATAGACCCACCCTTTTATCCATCCTTCCTTTCATCTATTATTTTATTCATATGTTT
Associated Phenotype:
Not determined