Busch Lab

ZMP

brd3b

Ensembl ID:
ENSDARG00000035126
ZFIN ID:
ZDB-GENE-030131-5316
Description:
bromodomain-containing protein 3 [Source:RefSeq peptide;Acc:NP_997867]
Human Orthologue:
BRD3
Human Description:
bromodomain containing 3 [Source:HGNC Symbol;Acc:1104]
Mouse Orthologue:
Brd3
Mouse Description:
bromodomain containing 3 Gene [Source:MGI Symbol;Acc:MGI:1914632]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa9154 Nonsense Mutation detected in F1 DNA Not yet available
sa1777 Nonsense Available for shipment Available now
sa2227 Essential Splice Site F2 line generated Not yet available

Mutation Details

Allele Name:
sa9154
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000043638 Nonsense 250 728 7 14
ENSDART00000050861 Nonsense 249 662 7 12
ENSDART00000132713 None None 68 None 2

The following transcripts of ENSDARG00000035126 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 68016604)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 63758103
GRCz11 5 64439267
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GACAACCTGCGCGATCACTGCCAGCCGAAGTGAGTCGCCTACTGCRATGT[T/A]GGAGTCCAAAYACAGTAAAGTCATTTCCAGAYGAGAGAGCACAGGTCGRC
Long Flanking Sequence:
TGAAAATTTGTAGTCTATTAATTAGTTTGATATCTGTAACTTATCCTAGCATAGTGTTTTCCAACCAAGTTCCTGGAGGCACACCAGCAGTACATATTTTGGATGTGTCCTATATCTGATCTATTTATTTCAGGTTTTGGAGTCTTTTCTAATGTTCTGATGAGTTGATTTAGGTGTGTTTGATTAGGGAGAGATTGAAAATGTGTACTGCTGGTATGCCTTAAGGAACAGGGTTTGGAAACACTGACCTAGCGAATGACGGATTGACTTTCTCTAAAGAAGATTACGGTCTAATTAAAAACCCTAAACCAGCCTAAATATCAAGTTTGTCAAGCACACTGCTGAGAAGAATCGTAATTTTTCGTTTCATTGTTTTAATTACGTTCTAACACACCTATGTCATTGTCCTCAGAAGAAAGGGGTGAAGCGGAAAGCAGACACGACCACACCGACAACCTGCGCGATCACTGCCAGCCGAAGTGAGTCGCCTACTGCAATGT[T/A]GGAGTCCAAACACAGTAAAGTCATTTCCAGACGAGAGAGCACAGGTCGACCCATTAAACCTCCCAAGAAGGACCTGGAGGACGGGGACGTCCAGCAGCCAGGCAACAAGAAAAGCAAGCTCAACGATCATCTCAAATACTGTGACACTATCCTCAAAGAGATGCTTTCCAAGAAGCACGCGGCCTACGCCTGGCCCTTCTACAAACCTGTAGACGCGGAGGCCCTGGAGCTGCACGACTATCATGAAATCATCAAGCAACCGATGGACCTCAGCACTGTCAAAGTATGGCCTAAAATTCAACTCACAATTAGTTCCTTTATTAAACAGAAATTAATATGTTGGTATGTATTAATATCTGTAGCTAATTTATATTTAAAACCGGTTGATTTATTGGCATGCTGCTGTGAGCATGTAAGATATTCTGCTGCTGCTGCTGTGTAAATAAGCATTCATAAATCCCATAGCAAATACAAACAGGTGGAGGTGGAAGGTTTCAGAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1777
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000043638 Nonsense 261 728 7 14
ENSDART00000050861 Nonsense 260 662 7 12
ENSDART00000132713 None None 68 None 2

The following transcripts of ENSDARG00000035126 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 68016572)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 63758071
GRCz11 5 64439235
KASP Assay ID:
554-1770.1 (used for ordering genotyping assays)
KASP Sequence:
AGTCGCCTACTGCAATGTTGGAGTCCAAACACAGTAAAGTCATTTCCAGA[C/T]GAGAGAGCACAGGTCGRCCCATTAAACCTCCCAAGAAGGACCTGGAGGAY
Long Flanking Sequence:
TCTGTAACTTATCCTAGCATAGTGTTTTCCAACCAAGTTCCTGGAGGCACACCAGCAGTACATATTTTGGATGTGTCCTATATCTGATCTATTTATTTCAGGTTTTGGAGTCTTTTCTAATGTTCTGATGAGTTGATTTAGGTGTGTTTGATTAGGGAGAGATTGAAAATGTGTACTGCTGGTATGCCTTAAGGAACAGGGTTTGGAAACACTGACCTAGCGAATGACGGATTGACTTTCTCTAAAGAAGATTACGGTCTAATTAAAAACCCTAAACCAGCCTAAATATCAAGTTTGTCAAGCACACTGCTGAGAAGAATCGTAATTTTTCGTTTCATTGTTTTAATTACGTTCTAACACACCTATGTCATTGTCCTCAGAAGAAAGGGGTGAAGCGGAAAGCAGACACGACCACACCGACAACCTGCGCGATCACTGCCAGCCGAAGTGAGTCGCCTACTGCAATGTTGGAGTCCAAACACAGTAAAGTCATTTCCAGA[C/T]GAGAGAGCACAGGTCGACCCATTAAACCTCCCAAGAAGGACCTGGAGGACGGGGACGTCCAGCAGCCAGGCAACAAGAAAAGCAAGCTCAACGATCATCTCAAATACTGTGACACTATCCTCAAAGAGATGCTTTCCAAGAAGCACGCGGCCTACGCCTGGCCCTTCTACAAACCTGTAGACGCGGAGGCCCTGGAGCTGCACGACTATCATGAAATCATCAAGCAACCGATGGACCTCAGCACTGTCAAAGTATGGCCTAAAATTCAACTCACAATTAGTTCCTTTATTAAACAGAAATTAATATGTTGGTATGTATTAATATCTGTAGCTAATTTATATTTAAAACCGGTTGATTTATTGGCATGCTGCTGTGAGCATGTAAGATATTCTGCTGCTGCTGCTGTGTAAATAAGCATTCATAAATCCCATAGCAAATACAAACAGGTGGAGGTGGAAGGTTTCAGATAAGACTTTGATAGCATACTGTAGGACCAGCTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa2227
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000043638 Essential Splice Site 473 728 10 14
ENSDART00000050861 None None 662 None 12
ENSDART00000132713 None None 68 None 2

The following transcripts of ENSDARG00000035126 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 68006498)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 63747997
GRCz11 5 64429161
KASP Assay ID:
554-2898.1 (used for ordering genotyping assays)
KASP Sequence:
CAATGGTAACAGGGCGGGGACAAAAAACGGGTGTGCCAAACGTTTTCAGG[T/G]GAATGATATTTTTACTTCCCGGTCCCCCACCCCACTAACTCCTCCATTTA
Long Flanking Sequence:
TGAACTTTGAATTAGAACAGGACTTCGGCGACGGTTGATGATGTTTCACGAGGACACAAGAACGCAAGTACAGACAAGAGCGCATTTTGAGAAACAGCCCTAGTGTTTAAATTCAGTAAACAGTGGTGCGTTCAATGAACTGATGACCTTCACGGCCAATCACAGTCATTTCTGTTGAGCACGTGAACACAATGGCAAATCTGCACTGTTTTAATGCACGCTCAACAGCGCTCAATTGTTAGTGGGAAATGAACTTTTAAAAATATCAGTATCAATTGGTACTGAATTCTAGTATCGTGACAACCCTAGTTTCACTATCTCTGTGTCAAACATTTGTGTCGATTTGAAGTTACTCTGCTCTCATGTGACACAGTCTGTTGTTAAAATACATTTTTTTTGTCCCTTGATTTCACTTTGACTTTTTTGCCAGCAATTCGCTGTGGAGCGCCCCAATGGTAACAGGGCGGGGACAAAAAACGGGTGTGCCAAACGTTTTCAGG[T/G]GAATGATATTTTTACTTCCCGGTCCCCCACCCCACTAACTCCTCCATTTATTTTTCGTAGCTTCTTCTTAAGTGAGCGGTAGAGGGTTAAGGTGGTGCTTTTATGGGGTGTATTTAAGCTGGGCATCTCCCTTAAGTCAGCTTGCTTTTGTCACTCAGCTAGTCTTTCGGCTCTGTTTCCCCCTCTCTGCTCTGTGAATGACATTGATTGGCAGGTTTATCGGGGAGAATACCAAATTTATGCCGGGACGTGGTGTCCAGTGCTTCCACATTATCATGGTAGAGCTTTTATTTTCAACGGTTGAAAATAACAATCGAATGAAAGTAGATTATTGTGTTCTTTCAAAATATGATTAATGAGGGGAAAGTGTGCTGGTCTTGGTTTGGATGGAGGCAGATTTTAAAGAGTTTAAATGAATGGAGTTTAAACTAGACTTGAAGCACTGTCATACCAAGAACGATAACTATAAAGAGAATCAAATTAGGGCCCTATGATTTCTA
Associated Phenotype:
Not determined