Busch Lab

ZMP

si:dkey-273o13.1

Ensembl ID:
ENSDARG00000078722
ZFIN ID:
ZDB-GENE-060526-282
Description:
Novel protein [Source:UniProtKB/TrEMBL;Acc:A2BIB0]
Human Orthologue:
CLIP1
Human Description:
CAP-GLY domain containing linker protein 1 [Source:HGNC Symbol;Acc:10461]
Mouse Orthologue:
Clip1
Mouse Description:
CAP-GLY domain containing linker protein 1 Gene [Source:MGI Symbol;Acc:MGI:1928401]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa38528 Nonsense Mutation detected in F1 DNA Not yet available
sa33768 Nonsense Mutation detected in F1 DNA Not yet available
sa9135 Nonsense Mutation detected in F1 DNA Not yet available
sa7278 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa38528
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000114783 Nonsense 232 1411 4 29
ENSDART00000145122 None None 436 None 13
Genomic Location (Zv9):
Chromosome 5 (position 70232747)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 66558857
GRCz11 5 67237226
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCGTTTCTTAGGGGAAACTGATTTTGCCAAGGGTGAGTGGTGTGGAGTT[G/T]AGCTGGATGAGCCCTTGGGGAAGAACGATGGAGCTGTGGCTGGAACCAGG
Long Flanking Sequence:
TCACTATGACAGAACTGACGTGTTTGTTTCGATTTAAAAATGAAAATTATTTTCTGTTTCAAGAGAAAGGGACTAGTAGAAAGTAAAAAGATCCCTGCAAAAATGCAAACCCTATAGCCTTCTGAAAACATGAACTGCCATTCGGTAATATTCAGTCAAAGTCTGAATATTTGCTTTACGTTTGGTGTGGTGGTCCTGTCAGTTTGACCAGCCACAATATTCTAAACCACGCCCCTCTTACCGTTAATTTGCTGTTAGGGAATGATGCACCAAAAGAAAGCCCCGCCTCCTACTCAATATTCCATTTCAGTTGAAAGCACATTAACATACTGATACTCGAAGGTTAATGATTGGCCATTTAATTTCAGAAGACTATCACCTATTGCTCAATTACGTTATTTTTTTCTACACATCTATAATTATAGGTTGCTGGCTCAAAAGCTGGCGTGGTGCGTTTCTTAGGGGAAACTGATTTTGCCAAGGGTGAGTGGTGTGGAGTT[G/T]AGCTGGATGAGCCCTTGGGGAAGAACGATGGAGCTGTGGCTGGAACCAGGTATTGTGTCCTGTTCTTACATCACAATCTAAAGGTGAATTGTCTATGAACAATGGGGGTATACATGCACAGAGACGTTTTATTTCAGTCAGCCAGCTCAAGCACTACTGGTGAGCTTTTTTTTTGTTGGCTGACAAACACTAGCTGTGCTTAAAGTATTTTACATGAATGCATTTGTTTATCTTCAGGTATTTCCAGTGTCAGCCCAAGTATGGTCTCTTTGCACCAGTGCACAAGGTGACCCGTATAGGTTTTCCCTCCACTACCCCAGCAAAGGCAAAAACCACTGTGCGGAAGACGACCGCCACCACCGCCGCCACTCCGTCAGCACTGAAGCGCAGCCCGAGTGCCTCCTCCATCAGCTCCATGAGCTCTGTAGCCTCTTCTGCTAGTTGCAAGCCAAGCCGTACAGGACTGGTGAGTCCTCACATGCATGCATATTTTTTGGTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33768
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000114783 Nonsense 1112 1411 21 29
ENSDART00000145122 Nonsense 82 436 4 13
Genomic Location (Zv9):
Chromosome 5 (position 70196661)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 66522819
GRCz11 5 67201188
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTGCAGCTGGATGCTCTAAAACAGCAGAACTCTCAGTATCAGGAGAGTT[T/A]GAGTTCTGACAGTGAGAGAATTAACAGCCTCAGTAAAGAGATGTGAGTGA
Long Flanking Sequence:
CAGTTGGAAATTTGTTAATGATTTTAATTAATATTACAAAGATTTTGGTATAAAGGAAAAATCAATAATTGACACACACACACACACAGTGTATTTTTGGTTATTGCTAAACATAATACCCTGTGCCAGGTTTTGTTGTCCAGGATCACATTAATAGTTTGTGTGAAACACTTAATGAATATGATAAGTTTGATTACTGATTTTAAATGTGCTGTTATATTTATTATAAATAAGTATTTTAACTTTTTTTTTTTAAATAAAATATTTTAAAAAAATATTAGCAATAGACTGTTCACATGGGTAAAAAATGTAACTACATTAAAATATACCTGGAAGATTCAGAGTAGTTCTGCTTTCCCGCAACAAGATGAGATGCCAAAATGTTAAGCGAGCCCTTGTGGATAGATGATTAGAAGATAGAGCATGTTTCTGAATGCTTTCTCTGTACTCTTTGCAGCTGGATGCTCTAAAACAGCAGAACTCTCAGTATCAGGAGAGTT[T/A]GAGTTCTGACAGTGAGAGAATTAACAGCCTCAGTAAAGAGATGTGAGTGATCTCCATTGTGAAACCTGAATCTTTTCACCTTGATATTTATTTGTCTAGAGGTGTTTTTCTTCATGTTTAATTTAGTATCAACATCTTACTTGACTTTTTTACTATTTTGTTTTTTTGTTTTTTGCATTTGCACAATATTTTATAGTAAGGAATTACACAGATTATGCAATTTCATAACTATAATAATGATATTATACAGTAATATAATACGCATTTCTTGATATATATATATATATATATATATATATATATATATATATATATGTATATGTATGTATATATATATATATATATATATATATGTATGTATGTATATATATATATATATGTATATGTATGTGTATATATATATGTATGTGTGTATATATATGTATATGTATGTGTATATATGTTTGTATGTATATATATATATGTATGCATATATATATATATATATATATATATATATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9135
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000114783 Nonsense 1129 1411 22 29
ENSDART00000145122 Nonsense 99 436 5 13
Genomic Location (Zv9):
Chromosome 5 (position 70195769)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 66521927
GRCz11 5 67200296
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CATTGAANNNNNNTCTGTGTTCAAACAAATGWYGGTTATGCGTTTCAGTGAGGAGT[T/A]GAAACAAGCCGCTGTCGAGAAATCCCAGGCAGTGGACGATCTGAAAAATG
Long Flanking Sequence:
GTATATATATATGTATGTGTGTATATATATGTATATGTATGTGTATATATGTTTGTATGTATATATATATATGTATGCATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATTGTTTGTTAATATATATAAGTTTGTAAAACTTCTTCTCAGTCCTTGGAGACTCCTCTGAGAAATGAGGTAATTTTAAATGTACATTTTGAGAAAATGAAAGTAATTTTGAACTTAAATGCATTTCAACCTATTGTGGGACTCCTCCAAAACAAAATCTGCAATATTTTCAATTGCATAATGGATTTTTAGTATTCCCCTCCTCTGAAAGAGATGCATCTTATTTCATGCATATGCAATACAGTATTGGCATTGGTTTATTGGTATTGTTTATTAGTAACATTTCACTGTGGTTCATGTTTTAACGCTAAAAGAGCATTGAATCTGTGTTCAAACAAATGTCGGTTATGCGTTTCAGTGAGGAGT[T/A]GAAACAAGCCGCTGTCGAGAAATCCCAGGCAGTGGACGATCTGAAAAATGAGAAGGAAAAGCTAACCATGGATCTCGCCAACAGCCTCAAAGACAGCAACATACTGCTAAATGTATGTTCAATCAGATTTATATACTATAGATTAGGAAGTTTGTCTAATAGAACTAATTAGTGTCAAGACCATTCAACATAATTGTTAGACCTGCTGTTTAGTACATGATTTACGATAAATATTATTATTATTGTTATTATTTTTGTATTTATATTATAAATTGATGTGTAGTATATGTATTCAAATATAATGTATATGTATTCAAATATAACACTATTTATTGTTGTTATTATTATTATTATTATTATTAATATTTTATTAATATATATTATAAAATAATGTATAATATATATTCATTTCCTAGAGATGGGTTGCAGCTGGAAGGGCATCCGCTGCGTAAAACATATGCTGGATAAGTTGGTAGTTCATTCTGCTATGGCGACCCCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7278
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000114783 Essential Splice Site 1226 1411 24 29
ENSDART00000145122 None None 436 None 13
Genomic Location (Zv9):
Chromosome 5 (position 70189947)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 66516105
GRCz11 5 67194474
KASP Assay ID:
554-4521.1 (used for ordering genotyping assays)
KASP Sequence:
TCTCAGAAAAGGACAAAGAGCTAGACTCYATGAGAAACGAGGTAACAGTC[G/A]CTTTGGGTTTTTTGAGTGTGYGAGTGCACGTTACTGTTTTTTGCTCAGTT
Long Flanking Sequence:
GGTTTCATCTTCATCCTCCTGCTAATGTAGATGTTGGACTGAAGCAGCTGATATTCATTTACACTGAAGAAGGGCAGAGGGTTGCTGAACTACTGAGAGATTTCAGCTGCTGTCTGGGCTTTTACTGGCTTTCTACACATACCTTTCTTTGTGTTCAATCATTTTTCCGTGTCATTTAATTATTTTACACATAAAGTAATTAGTTTGTTTGCATAAATGGATTTCTTTGGTTCTTACCAACATCTGGTGAAAATTTCAAGTCAACAGCACCTTTAGAAATATGTTTTCTGAGTAAAATGGTGAAGTGTTCAATACTTACTTCCCCCACTGTAACTAAACTTGAACATGAACCTGCGGTCTGTCTTCTGCACAGGGAAAGCACTTTAACGAAAGAAACGGAAAAGGAGAAAGCAGCACTTCAGCAATCTCTTCAAACCCAGAGTGCCTTGATCTCAGAAAAGGACAAAGAGCTAGACTCTATGAGAAACGAGGTAACAGTC[G/A]CTTTGGGTTTTTTGAGTGTGCGAGTGCACGTTACTGTTTTTTGCTCAGTTCTTCTGGTGTGGGTCGCGTGCAGATGGGTGGTCTGCGGGATCAGACACAGACGCTGCAGTCCAGTCTCAAATCTCAAAAGAGTGAGAATATTCAGCTTCAGGAGCGACTGAAGGGTCTGGAGAGGAGTTTAGCCGACGCTCAGATCCCCAGCAAAGGAGATAACGCCTCAGGTACAGCACCACACATGATTTTATAGCTTATATTAAATGGTTAGTTCACCCAACAATGAACATTTACTCATTTATTTACCGACACGTGGTTCTAAACCAGTTTGAGTTTCTTTATTCTGTTGAACACAAAAAAAAAAGAAATTTTGAAGAATGATAAACCCAACAACTGACTTCCATAGTAGGAAAACAAATACTATGGATGCCACAGGTTTTCAGCTTTCTTCAAGTGACCTATTTTTGCATTCAACAGAAGAAAGAAACTCAGGGTGCTTTCACAAC
Associated Phenotype:
Not determined