Busch Lab

ZMP

taf6

Ensembl ID:
ENSDARG00000029135
ZFIN ID:
ZDB-GENE-040912-23
Description:
transcription initiation factor TFIID subunit 6 [Source:RefSeq peptide;Acc:NP_001004557]
Human Orthologue:
TAF6
Human Description:
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa [Source:HGNC Symbol;
Mouse Orthologue:
Taf6
Mouse Description:
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor Gene [Source:MGI Symbol;Acc

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa33739 Nonsense Mutation detected in F1 DNA Not yet available
sa9111 Nonsense Mutation detected in F1 DNA Not yet available
sa30621 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa33739
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000042901 Nonsense 271 636 8 14
ENSDART00000143810 Nonsense 222 587 7 13

The following transcripts of ENSDARG00000029135 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 63699915)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 53101261
GRCz11 5 53747854
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCCAGGTGCGTGTAAATGTTGTTCAGAATAACTTGGCTTTGCTGATATA[T/G]TTGATGAGGATGGTGAAGGCTCTAATGGACAATCCAACTCTATATTTGGA
Long Flanking Sequence:
ATGCAATACTATATGTAAAAAACAAAATTATTGTATAGTCTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTTTGTGTGTGTGTGTGTGCAAGGCAATATTGACCTTTTTATAGGCTCTAGGCTATAGATCTAAACAATATTTCTTTTAATATATAATATATAATTGAATACAAGAATTGTTGTGCTGTGAAGTTAATCATAAAATTGTGTATGGAAAGCACCGAGATATCGAATTTAACTGAATTGATGGAATAATATTCATAACTGAACCGAACTATGAGACCAGTGTAGGTTCACACTTCTAGAACCTAATGTACTCTTATGTTTAAATGTTATTAGTTACCCCTTAAAATTGGGTCTGCATTTTTAATATGGTGGTGTGACAAAGTTGTTTTTTCTCTCTTCCAGGTGCGTGTAAATGTTGTTCAGAATAACTTGGCTTTGCTGATATA[T/G]TTGATGAGGATGGTGAAGGCTCTAATGGACAATCCAACTCTATATTTGGAGAAATATGTGAGTTGTTATATGCATACTATTCCATTATTATAATTTCATTTTGTTTTTGCCTGTTAACTTAGGGTAATTTAGTTTTTCTTACAGTAAATTTCAAGTTGTTTTCTACACTTAGAAGACACATGACTTGCTGCTAATATACCTTAAAGAATTTGTAAACTGTAAACATGCTTCATGTTTGGAGTTCCTTGGAAAAGTAATAAAAATTCTTTATTTTTTGCTTTTTTCCAGCTCCATGAGTTGATCCCCGCGGTGGTGACATGTATTGTGAGTAAGCAACTGTGTTTGAGGCCTGATGTAGACAATCACTGGGCTCTGCGAGACTTTGCTGCCCGGTTAATGGCTCAGAGCTGCAAAACATTCAGCACCACAACCAACAACATCCAGTCGCGTATCACCAAAACCTTTACTAAGGTAGCAGACACTGTATGTGCATGGCCACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9111
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000042901 Nonsense 409 636 11 14
ENSDART00000143810 Nonsense 360 587 10 13

The following transcripts of ENSDARG00000029135 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 63690254)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 53110922
GRCz11 5 53757515
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTATTAAAGCAGTGATGGAWGGGCCAGTGGTATCCAATATTGATAAGATT[G/T]GAGCTGATCATGTCCAGAGTCTATTACTGGTAAGTACCTTACAACAGCCT
Long Flanking Sequence:
AAATTCAAGGTGGTGAGAGAGCAGTCTAATGCGATGTGTAATGTCATCTATCGGCAGGACGGTAAGCCTGCCTGTGCCTCTGCCGAAGCGGGCACGTCAAGTACCACGGAAGCTGGCAGCCCTCCTTGCCTAGGGTGCCATTAAGTCTGGTAACAGACACCTAAGCGTACCTGAGACCTGAGACAATTCAGAGAAAAGGGAATTTGCTCTTTCCCCGCTGGAGGGCCGGGCCCCATTTTCAACTGGACCCAAAAAAAAATTGTGATATATTTGACATTATTTGATTTCAGGCTAAATTGTCCATGGTGTCTGACTTTTGAAGGCACTTATGTGGAAAAACTGTAAGCATTAAAAGCATTAAGTTTCTAAATTGAGAAATTTGATGTCTTTTTCTGACTATGTAGGTGATAAAGACTTTGATCATCCCCCGACTGTTTGTAGAGGGTGCCCGTATTAAAGCAGTGATGGATGGGCCAGTGGTATCCAATATTGATAAGATT[G/T]GAGCTGATCATGTCCAGAGTCTATTACTGGTAAGTACCTTACAACAGCCTCTTAATCGTTGATAAGCAGTTGTTGTGGTGTTTATCTTATGCTTTTAAGTTTTTTTACATGGTCATTTATACACTGCTAAAAAAAATAAAGGGAACACTTCAACAACACAATGGAACTCCAAGTCAATCTCACTTCCGGGAAATCAAACTGCCAATTTAGGAAGCAACAGTGATTAACAATCAATTTTGCATGCTGTGGTGCAAATGGAATAGAAAACAGGTGGAAATCATAGGCAATTAGCTAGACACCCCCCAATAAAGAAGTGGTTCTGCAGGTGGTGACCACAGACCACTTCTCCGTTCCTATACTTTCTGGCTGATGTTTTGGTCACTTTTGACTGCTGGTGGTGCTTTCACTCTAGTGGAAGCATGAGACGGATCTTAGGCCTGAACTACAAAACCAAATGTAAAACAATTTTAGTATCTGTTTTGCTTAAGTTGCACACTAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30621
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000042901 Nonsense 442 636 12 14
ENSDART00000143810 Nonsense 393 587 11 13

The following transcripts of ENSDARG00000029135 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 63688571)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 53112605
GRCz11 5 53759198
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTAAAACTAGGCCGGTCCCAGATCTGGTGGAGCAATACAAAGCAGATTA[T/A]GGTTATCTGGGCACTATGCTATGTTCACATGTGGTGAAGGCCCGTGCACA
Long Flanking Sequence:
GCCATTATATATATAAATAAAAGTTCTGTCTGGTTCTCGAATCTGATTGGCTGATAGCAGTGATATATTTAATATCAGCACCAGTACAGCCTCTTTACACTTTGTGTATTACTCCGCCCACATGCAGCCAGCAAAAAGCAGACACTTCAGATCAAAGTTTAAAGGATGCTTGCTCAGCTGTTTAACTGTCAGCCTATGATTTCAATCCAACGCAGAAGAAAAGAGTTCCTCAAAAAAAAGTTTTTGAGACTTTCCATGTTTGATTTTGTTTTTATATACACAATTATGCCGTCAAACTGTTGTATAAACGCAATATCACACTCGTAGCAGTGTGATATAGATGTATATCGGCACTAGTATATATATATATATGATTGTATATATAAAATGCATTAAAAAAATGTAATTCCTTCTGGTCTCTGTGTTTAGAAACATTGTGCAAGTGTGGTTGCTAAAACTAGGCCGGTCCCAGATCTGGTGGAGCAATACAAAGCAGATTA[T/A]GGTTATCTGGGCACTATGCTATGTTCACATGTGGTGAAGGCCCGTGCACAGGCTGCCTTTCAGGCCCAAACTGTTAACAGAACCACACTTACTATCACACAGGTGAGTAAATTTTAAATAAAATATTTGTCATACTTGTTAAAATCATACACATCAAACCTAAATTCTCTCCGTCTTGTATTTAGCCACGTCCGACTTTGACAATGTCTCAGAGTGGATTGTCAACATCAGGTGTTTCACGTACACCCAGCATAATTAAAGTACCCAGTTCACTTACCCTCATGTCTACTCGACCTGGAACACCCACTCAGCCATCACCCCCAGCAACAAAGTATATTGTTATGGCAACAAGTGCAGGGGCTGCATCCACACAGCAGGTAAGAGTTTTAAAGTAATTTGTGTTATATGTAATATAACAAAATTTTATTTCACAAAGATTGTTTTCCCACATACAAAAGAAAACCTTTAATTGTACTATTTTTATTTAAAATAAAAATAGT
Associated Phenotype:
Not determined