ZMP
cacna1ab
Ensembl ID:
ZFIN ID:
Human Orthologue:
CACNA1A
Human Description:
calcium channel, voltage-dependent, P/Q type, alpha 1A subunit [Source:HGNC Symbol;Acc:1388]
Mouse Orthologue:
Cacna1a
Mouse Description:
calcium channel, voltage-dependent, P/Q type, alpha 1A subunit Gene [Source:MGI Symbol;Acc:MGI:10948
Alleles
There are 14 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa12560 | Essential Splice Site | Available for shipment | Available now |
sa12516 | Essential Splice Site | Available for shipment | Available now |
sa15403 | Essential Splice Site | Available for shipment | Available now |
sa10764 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa12560
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000008139 | Essential Splice Site | 38 | 2101 | 1 | 51 |
ENSDART00000008139 | Essential Splice Site | 38 | 2101 | 1 | 51 |
Genomic Location (Zv9):
Chromosome 11 (position 31781540)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 11 | 30658902 |
GRCz11 | 11 | 30906086 |
KASP Assay ID:
2260-4470.1 (used for ordering genotyping assays)
KASP Sequence:
CGAGCAGTCAGAGTRTTACGGCCGCTAAAACTGGTGTCAGGAATTCCTAG[T/C]AAGTTTTCCATCTGTGTCAGTTTTTTTCTGTCTTTTTTCCCCCAACATGC
Long Flanking Sequence:
ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATGGATGGATGTAAACTTAGCTAATTAATGCATCAGCTTTAGTTAGCCTTGGATGAACAACCACTCATGCACACACATTCACTCACATTTAAAGATCAGACAATTTGAACAGTGTGTGATGCGAGAACCCAGCAGTGTGTGATCAATTATTTACCTTCAACTGACCTCTTCTCCTGATAGTGTGTTTCTTTGACACATGACATGTTTTCTCATTTTTCCTCAAAAATGAATGATGCATGATTGCAAAAATAACTATTTCCTGGCTTGTTCTTCTGTCCTCCAGTATCCTGTCCTCCGTGGGGTCAGAATTAGACCTGCGGACGCTGCGAGCAGTCAGAGTGTTACGGCCGCTAAAACTGGTGTCAGGAATTCCTAG[T/C]AAGTTTTCCATCTGTGTCAGTTTTTTTCTGTCTTTTTTCCCCCAACATGCATTAATACCATTACTCTCCAGGCCTGCAGGTGGTGCTGAAGTCCATCATGAAGGCCATGATTCCACTGCTGCAAATTGGTGTGCTTTTATTCGTGGCCATTCTTATGTTTGCCATTATTGGCCTGGAGTTCTACATGGGCAAATTCCACACCACCTGCTTCAACACCATCACTGGTGAGCTTTTCTCAAAGAGAGAAGACAAAAAAAACATGTTGTAGTAGTTTTACCTAACCATGAAACTTTATGTTGACCAGGTGAGATGTATGATGAACGGCCATGTGGAGCTCGGACATGTGATGCAAACAATACGCAATGCCAGGGCTACTGGCTTGGGCCCAACTATGGGATCACACAGTTCGACAATGTACTTTTTGCTGTGCTCACTGTATTCCAGTGCATCACAATGGAGGGCTGGACTGATATGCTTTATTATGTAAGACTTAAAGGCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12516
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000008139 | Essential Splice Site | 38 | 2101 | 1 | 51 |
ENSDART00000008139 | Essential Splice Site | 38 | 2101 | 1 | 51 |
Genomic Location (Zv9):
Chromosome 11 (position 31781540)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 11 | 30658902 |
GRCz11 | 11 | 30906086 |
KASP Assay ID:
2260-4470.1 (used for ordering genotyping assays)
KASP Sequence:
CGAGCAGTCAGAGTRTTACGGCCGCTAAAACTGGTGTCAGGAATTCCTAG[T/C]AAGTTTTCCATCTGTGTCAGTTTTTTTCTGTCTTTTTTCCCCCAACATGC
Long Flanking Sequence:
ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATGGATGGATGTAAACTTAGCTAATTAATGCATCAGCTTTAGTTAGCCTTGGATGAACAACCACTCATGCACACACATTCACTCACATTTAAAGATCAGACAATTTGAACAGTGTGTGATGCGAGAACCCAGCAGTGTGTGATCAATTATTTACCTTCAACTGACCTCTTCTCCTGATAGTGTGTTTCTTTGACACATGACATGTTTTCTCATTTTTCCTCAAAAATGAATGATGCATGATTGCAAAAATAACTATTTCCTGGCTTGTTCTTCTGTCCTCCAGTATCCTGTCCTCCGTGGGGTCAGAATTAGACCTGCGGACGCTGCGAGCAGTCAGAGTGTTACGGCCGCTAAAACTGGTGTCAGGAATTCCTAG[T/C]AAGTTTTCCATCTGTGTCAGTTTTTTTCTGTCTTTTTTCCCCCAACATGCATTAATACCATTACTCTCCAGGCCTGCAGGTGGTGCTGAAGTCCATCATGAAGGCCATGATTCCACTGCTGCAAATTGGTGTGCTTTTATTCGTGGCCATTCTTATGTTTGCCATTATTGGCCTGGAGTTCTACATGGGCAAATTCCACACCACCTGCTTCAACACCATCACTGGTGAGCTTTTCTCAAAGAGAGAAGACAAAAAAAACATGTTGTAGTAGTTTTACCTAACCATGAAACTTTATGTTGACCAGGTGAGATGTATGATGAACGGCCATGTGGAGCTCGGACATGTGATGCAAACAATACGCAATGCCAGGGCTACTGGCTTGGGCCCAACTATGGGATCACACAGTTCGACAATGTACTTTTTGCTGTGCTCACTGTATTCCAGTGCATCACAATGGAGGGCTGGACTGATATGCTTTATTATGTAAGACTTAAAGGCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15403
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000008139 | Essential Splice Site | 340 | 2101 | 8 | 51 |
Genomic Location (Zv9):
Chromosome 11 (position 31785271)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 11 | 30662633 |
GRCz11 | 11 | 30909817 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTGGCTGYAGTACACTACGATCAGCCTGAGCTACTGTCAGACTTCCTCTG[T/A]AAGTTCTGAYTCTTACTGAGTTGTTTGTTTTTACTTGCATGTTCAAAAAT
Long Flanking Sequence:
TTAAGGCAGCTAATATTATTGACTTTAAAATGGTTTTAAAAAAATAAAAAACTGCTTTTGTTGTATCCGAAATAAAACAATTAAGACTTTCTTCAGAAGAAAAAATATTATCAGACATACTGTAAAAACTTCCTTGCTCTGTTAAACATAATTTAGGAAATATTTGAAAAAGAAAATACACTTCACAGGAGGGCTAATCATTGTGACTTCAGCTGTATATATAATATCATATAGTGTTAATGCTAGGGTAGGAGATTTGAATGGTGCCTCACAATGTTATGCTATTTATTCTCAGGCTCACCTTTTGCTCGTGGAAGCATGAGCGGGAAGGGTGATGAAACCCCATTTAGCAAGAAAGAGCGACGTCTTCGCTTCCTTATTCGAAAGATGGTAAAGACTCAGGCGTTTTACTGGACCGTCATTAGCCTGGTTGCACTCAACACACTGTGTGTGGCTGTAGTACACTACGATCAGCCTGAGCTACTGTCAGACTTCCTCTG[T/A]AAGTTCTGATTCTTACTGAGTTGTTTGTTTTTACTTGCATGTTCAAAAATGTCATACAGATGGAATCAGCATAAAACACATGAAACACTGCTGTTCTGATGAAATGTGTCAGTGTCAGGACTCGCAGGGGTCATAATATCTACATCAGAAGTCAACTGTAGAACTTAAGACCATGGTTGCAAATTAATAGTATTTTGTGGAAAAATTTACACCAGCAAGAACAAGATTAAGGAAAATTTGAAGAAAATGTTTCAATAATTATCTTATCTTTGGAAAGAGGCTTCATCTTCTTCTTCTGAAACAATTTTTAAAGTCTATTTCCTTCTAAGCCTTTTAAGCTATATCCTTCAAACTTTCATCATAGCTTCATACTGGTCTGATTTGGGTTGCTTTTAACTTTTCCAACTGATCTAACTTTCAGATTTCTGATAAACGACCCGGAAAATTCCTGTTGACTCATCTCATTGGACCACACTTGGGTCAAACTTTGTACAGACTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10764
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000008139 | Essential Splice Site | 983 | 2101 | 24 | 51 |
Genomic Location (Zv9):
Chromosome 11 (position 31808013)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 11 | 30685375 |
GRCz11 | 11 | 30932559 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTYTGTGTGTGGTTTCGCCTCTTTGCTTTATTCCTCTGCTTTGTGTTTC[A/G]GATGGTGGTGTTAGGCTTGATTTTGCACGAGGGCTCATATTTTCGTGAYC
Long Flanking Sequence:
GCCAAATATTATGCTATCACTACAAACCATCAATCAATTAAATTTATTTATTTATTTATGTATTTCCAAATTGACACATATAACTGGTTTTGTGGCACAGGGTCACATTTACGTTTATGTTCATTTTTCCAAATCAAATGATATTTTGAGGGAAATGTCTTAGACAAGTCACTTATTAGTTCAGACAAAAACATTTTTAAATAAATAATTATATAAATAAATAAATAAATAAATGCCAATAGTTTCAACTACTTAGCCTCAAATCTCAGGTTAAGTGGATGTCGTGTGATTTAATCTCAAATAGACTTTGCATTTTATAGAACACATTTGTAATCAATTTTTTTCCTGTTATCCAGGTTTTGCGTTATTTTGACTACGTCTTTACTGGAGTGTTCACCTTTGAGATGCTTATCAAGGTAAATCCTTGGTCAAATGACTTCCGTGATTGAGTTTCTGTGTGTGGTTTCGCCTCTTTGCTTTATTCCTCTGCTTTGTGTTTC[A/G]GATGGTGGTGTTAGGCTTGATTTTGCACGAGGGCTCATATTTTCGTGACCTGTGGAACTTTCTGGACTTTGTAGTGGTTAGTGGTGCCCTGGTAGCCTTTGCCTTCACGTAAGTGCCCTTTTACCCCCTGCGTCTCCTGCCGCACAGTGCCTGCCTGCTGCCCCTTATCTTCTCCTCTGCCACCCTGGAGCCTTGTCAATACTCTCTCTTCTGGTCTCTTTTTCTTCTCCTGTCAGCACTGTTTTGCTCTTTTCAGCTTTCTATCTCTGTTATTTATTTTTTTGTCACTTTGCTTTCTGTCTCACTCAATCAGTCACACAAATGAAGGCCTTTCTCTCTTTCCACACACTCAAGCGCACCCACTATCTGTCCAGACCAACCTGTCTGTCTCTCTTTTCTCTCTGGCCAATCAGATCCCCAGCTTTTAAATTGTTCACTCCTCTGTTTCTTTGTCATCCAACTGCTGCCATTAGCCTGTGTTTGTCTTTAGTCTCACATTA
Associated Phenotype:
Not determined