ZMP
si:dkey-211m23.2
Ensembl ID:
ZFIN ID:
Description:
collagen type XXVIII alpha 1 a [Source:RefSeq peptide;Acc:NP_001153314]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa17519 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa17519
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000115121 | Nonsense | 1056 | 1208 | 32 | 35 |
| ENSDART00000134185 | None | None | 67 | None | 9 |
| ENSDART00000140185 | Nonsense | 1040 | 1192 | 33 | 36 |
Genomic Location (Zv9):
Chromosome 9 (position 49290272)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 48605342 |
| GRCz11 | 9 | 48302737 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTATGGAAGCAGATTTCAGGAGTCACTAGACAGATCGCAGAGTCACACC[A/T]GAGGCAGAGGACACAGTATACCATTACCCATCAGCCCCGGGCCTCTCAAA
Long Flanking Sequence:
TAAAACTGCTTATTTAAAATGAACTGAAACAACACAATTCTTATTTTTTCAGACAACATTGTTTTATGTGCAATCCACTTAAACTTGTATAAACAATTAACTTAATCGATTTGTGTTGGGACAGCATGAATGTATTGTGTGGAACCCTGCTTTTTTCATTCATTCATTCATTCATTCATTTTCCTTCGGCTTAGTCCCTTATTTATCAGGGCTTGCCACAGCGGAATCAACCGCCAACTATTCCAGCATTTTTTACAGTGTAATCAACTAACCGCATCTTGCTCTGTGTTTGGTTTGTTTTTGCAGCTCTGGAGTCTAAACTAGTTAGCCAGTTCTGTGAGGATGAGAACGGAGCCCTTTACTTTAACCGGATCACCAACGGCTTAAACGGAAACAATGGATTTGGCTACAGTAATGGTCAAGAGGACATTTCCTCATACGGCAACACCGTTTATGGAAGCAGATTTCAGGAGTCACTAGACAGATCGCAGAGTCACACC[A/T]GAGGCAGAGGACACAGTATACCATTACCCATCAGCCCCGGGCCTCTCAAACCACAGGTCAGAAAACATCACTACACTGCGGAAAATCTAATTATTAAATCAAGATGCATTTTACAGACAAGTAAAAAATATAGTTTTTTTCTTTCAAGCTATTTTTTAAAATGTTTGCTGCTTGATCAAACTGAAGTGAAACCCACGTCAACACGAGGAGAGCATGCAAACTCCACACAGAAATGCCTACTGGCCCAGCCAGGACTCGAACCAGCGAGCTTCTAGCTGTGAGGCAACAGTGCTAACCACTGAGCCACTGTATCGCCTAATTTCATCTGATGTCTACCAGAAGTTATGTAAAGAGAGAAAACATCAATCATGTCAAAGTTGTCAGCAAATGCTATTACAGAACAAGAAAATAAATATCTATAAAACCCTCATTTAATTTAATAATGAGAATTGATCCCTAAAGTGTTCTCAAATGTACTAATTTTGATTGACTGGGATGAT
Associated Phenotype:
Not determined