ZMP
brf1b
Ensembl ID:
ZFIN ID:
Description:
transcription factor IIIB 90 kDa subunit [Source:RefSeq peptide;Acc:NP_956183]
Human Orthologue:
BRF1
Human Description:
BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) [So
Mouse Orthologue:
Brf1
Mouse Description:
BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) Gen
Alleles
There are 7 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa43418 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa37009 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa11693 | Essential Splice Site | Available for shipment | Available now |
sa9022 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa43418
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000035827 | Nonsense | 398 | 693 | 12 | 19 |
The following transcripts of ENSDARG00000005002 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 20 (position 21020184)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21048351 |
GRCz11 | 20 | 20948024 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTCATAAGTCAGGTGCTTAACCGAAGAGACCAGGGAGGAAAGAAGGATT[T/A]AGATGGAAGAAAGAACACAGTCCCGCTTCCTAATCAGTCCAAACATGTGC
Long Flanking Sequence:
TTCACAGGTCTGTGTTCTCTGAACTCCTCTCAAGCGGTGGACTTCTACATTCTGATTGCTTGCCGCTGAACCACGTCATATCTCATTACCATAAAGTTGACTTGATTTCAACTCTCCTCGACGCTCCAACTGGCAAAGACGCACCGCGCTGCTCCTCGCCGCTTATCACCGCCAGCTCTCATTGAAAATTAATGACTTCCGGCTACTTTGACACTCTTGCCGCTTTCGGTGTGAATGTACGGTGGCATTATAAAAAAGAAATAATTTCTGTATTAAATGTATAGATCATTAATTCCAATCAGTAAGAACATTAACTAATAGAACCTTATTCCAAAGTTTTACTTTCTTTATTTCAGATGATGACTCTTTGTCTTTGGCCTCTGGATTGGCTGGAGATGAAGATGCAGAGGATGAGGAAATGGAGGCAGCAGCTAAACATCTTAACCAAGAGTTCATAAGTCAGGTGCTTAACCGAAGAGACCAGGGAGGAAAGAAGGATT[T/A]AGATGGAAGAAAGAACACAGTCCCGCTTCCTAATCAGTCCAAACATGTGCCCCTGACTGCCCTCCTCGGCCCTCTGCCCAGTGCTGCCAGCCTTGGTTTAACAGACTCCATTAGACAATGCATCACAGAGACAACAAATGGTGAGTGTGCCACTTAATGGTGCTTTACAAATTCAGCATGACTTGGTTTGCTTCTTCAATGCAGTTTAGCTCTGAATTAAAGTGGGTGGGATTGTAGACATGTCGTTATAGTTGCAATGCCATAACTGCCACGACGTCATCATAAACACAAGCTGAGCTTATTGTGCTTTTTGTTCTGCATTGCCCCAATTAAGTTCTCGCTGGATCTGCTCATTGACAAACAACCAAAAGTATAATTGTGTTTAGTCTGTTTTCTACAACACTGCCATGTTATGGTGCACACATTCAATGATTGTTTATTGGCTCATTAGAAGATTTGAAAGAGTCTGAGTATTTTCCATTGTGCTTACTCTGGGTATC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37009
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000035827 | Nonsense | 437 | 693 | 12 | 19 |
The following transcripts of ENSDARG00000005002 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 20 (position 21020300)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21048467 |
GRCz11 | 20 | 20948140 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCGGCCCTCTGCCCAGTGCTGCCAGCCTTGGTTTAACAGACTCCATTAGA[C/T]AATGCATCACAGAGACAACAAATGGTGAGTGTGCCACTTAATGGTGCTTT
Long Flanking Sequence:
CTCGACGCTCCAACTGGCAAAGACGCACCGCGCTGCTCCTCGCCGCTTATCACCGCCAGCTCTCATTGAAAATTAATGACTTCCGGCTACTTTGACACTCTTGCCGCTTTCGGTGTGAATGTACGGTGGCATTATAAAAAAGAAATAATTTCTGTATTAAATGTATAGATCATTAATTCCAATCAGTAAGAACATTAACTAATAGAACCTTATTCCAAAGTTTTACTTTCTTTATTTCAGATGATGACTCTTTGTCTTTGGCCTCTGGATTGGCTGGAGATGAAGATGCAGAGGATGAGGAAATGGAGGCAGCAGCTAAACATCTTAACCAAGAGTTCATAAGTCAGGTGCTTAACCGAAGAGACCAGGGAGGAAAGAAGGATTTAGATGGAAGAAAGAACACAGTCCCGCTTCCTAATCAGTCCAAACATGTGCCCCTGACTGCCCTCCTCGGCCCTCTGCCCAGTGCTGCCAGCCTTGGTTTAACAGACTCCATTAGA[C/T]AATGCATCACAGAGACAACAAATGGTGAGTGTGCCACTTAATGGTGCTTTACAAATTCAGCATGACTTGGTTTGCTTCTTCAATGCAGTTTAGCTCTGAATTAAAGTGGGTGGGATTGTAGACATGTCGTTATAGTTGCAATGCCATAACTGCCACGACGTCATCATAAACACAAGCTGAGCTTATTGTGCTTTTTGTTCTGCATTGCCCCAATTAAGTTCTCGCTGGATCTGCTCATTGACAAACAACCAAAAGTATAATTGTGTTTAGTCTGTTTTCTACAACACTGCCATGTTATGGTGCACACATTCAATGATTGTTTATTGGCTCATTAGAAGATTTGAAAGAGTCTGAGTATTTTCCATTGTGCTTACTCTGGGTATCAGTACGTCTTAACATTATTTTCAACGTCAGAAATACATTGTTCCACTGTTCATTCTTGTGAATCCTTTCATGTAATTAAATAACACCATCAATTCTCTTATAAAGTATTATGGCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11693
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000035827 | Essential Splice Site | 511 | 693 | 15 | 19 |
The following transcripts of ENSDARG00000005002 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 20 (position 21050454)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21078621 |
GRCz11 | 20 | 20978294 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGAGGAGAGAATTGCTAAAGARAAGGAACAGGGRACCTATAAGGAGAAG[G/A]TGAGTGTGTGTGTGNNTCTGGMTTTTTCTTACYATTTCKGCAGGAGCTTTAC
Long Flanking Sequence:
TACAGTACATTTTGAATGAGATCGAGGTCGAGGCGAAGACAGAGCTGTGGATGAAACAGAACGAGGAGTATTTGAGGGAACAGAAAGGTAAGCGAACAGTAGAAGAATAGCTTAATCCATTTATTCACACAAGCTCATGCACTCAATCTGGGCTGACGTCACAGGCATAAAGATAAAAATTCAGTGAATAGAGGGATTTCATTTTTTTTAAATACTGGCACAGTGAACATAATTCCATCCCATGACTGAACTTCCTGAGATGAATCTTGATTTTCAAAATACATACACATGAAAAATACCTGTCATAGCTAAGCGATTGGCCTCCAGAAGTTAATCTGCTCAACGTTTTAAAGGCTGTTGAGTTTTAAAAGCCATTATTTTTGTTGCTTTAAGAGCTCTCGATTTAATATATCCACTGTGCTCCCATTTTGCTTTATTTTTTTACAGAAAAAGAGGAGAGAATTGCTAAAGAGAAGGAACAGGGGACCTATAAGGAGAAG[G/A]TGAGTGTGTGTGTGTCTGGCTTTTTCTTACCATTTCGGCAGGAGCTTTACTTCCACGTCGGAATCTTCAGACACTCAGCAGCTGCCAATCCTTGGAGACCGCATACTTTCCATTTTAACTTCAGTTGCTCCTCTAGTTTCACCCCATGCTCTCAGTGTCGCCTCTCTTTAACCTGTCTGCTCTGACATCTGCACCATGATTCCCTGTCGGGGTTGGATTAGCTGGCCCTGCTCTGCACCTCTAATGAGCTGCCTTGAGCCTGATAGCAATTTCAGGTACAGTAGTTCACTTTCTAACTGTGAAGAGACTTGTTCCACAATGATAGTCTAGGAACATGGTCAGCAGTGACCAGATCAGATGGGCTTGATTGCTTTTTCTGGCTACAAATGGGATTCTGTCACCTTGGTGTTGACAGCTGTTTGCCTGATATCGTTATATCAAAGGCCTAATGGGAGAAATGCACTCAGATGCCCCTTTGAAACGAATGGAAATGCTCATTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9022
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000035827 | Essential Splice Site | 511 | 693 | 15 | 19 |
The following transcripts of ENSDARG00000005002 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 20 (position 21050454)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 20 | 21078621 |
GRCz11 | 20 | 20978294 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGAGGAGAGAATTGCTAAAGARAAGGAACAGGGRACCTATAAGGAGAAG[G/A]TGAGTGTGTGTGTGNNTCTGGCTTTTTCTTACYATTTCKGCAGGAGCTTTAC
Long Flanking Sequence:
TACAGTACATTTTGAATGAGATCGAGGTCGAGGCGAAGACAGAGCTGTGGATGAAACAGAACGAGGAGTATTTGAGGGAACAGAAAGGTAAGCGAACAGTAGAAGAATAGCTTAATCCATTTATTCACACAAGCTCATGCACTCAATCTGGGCTGACGTCACAGGCATAAAGATAAAAATTCAGTGAATAGAGGGATTTCATTTTTTTTAAATACTGGCACAGTGAACATAATTCCATCCCATGACTGAACTTCCTGAGATGAATCTTGATTTTCAAAATACATACACATGAAAAATACCTGTCATAGCTAAGCGATTGGCCTCCAGAAGTTAATCTGCTCAACGTTTTAAAGGCTGTTGAGTTTTAAAAGCCATTATTTTTGTTGCTTTAAGAGCTCTCGATTTAATATATCCACTGTGCTCCCATTTTGCTTTATTTTTTTACAGAAAAAGAGGAGAGAATTGCTAAAGAGAAGGAACAGGGGACCTATAAGGAGAAG[G/A]TGAGTGTGTGTGTGTCTGGCTTTTTCTTACCATTTCGGCAGGAGCTTTACTTCCACGTCGGAATCTTCAGACACTCAGCAGCTGCCAATCCTTGGAGACCGCATACTTTCCATTTTAACTTCAGTTGCTCCTCTAGTTTCACCCCATGCTCTCAGTGTCGCCTCTCTTTAACCTGTCTGCTCTGACATCTGCACCATGATTCCCTGTCGGGGTTGGATTAGCTGGCCCTGCTCTGCACCTCTAATGAGCTGCCTTGAGCCTGATAGCAATTTCAGGTACAGTAGTTCACTTTCTAACTGTGAAGAGACTTGTTCCACAATGATAGTCTAGGAACATGGTCAGCAGTGACCAGATCAGATGGGCTTGATTGCTTTTTCTGGCTACAAATGGGATTCTGTCACCTTGGTGTTGACAGCTGTTTGCCTGATATCGTTATATCAAAGGCCTAATGGGAGAAATGCACTCAGATGCCCCTTTGAAACGAATGGAAATGCTCATTT
Associated Phenotype:
Not determined