Busch Lab

ZMP

kdm2aa

Ensembl ID:
ENSDARG00000059653
ZFIN ID:
ZDB-GENE-061215-144
Description:
lysine (K)-specific demethylase 2B isoform 2 [Source:RefSeq peptide;Acc:NP_001075161]
Human Orthologues:
FBXL19, KDM2A, KDM2B
Human Descriptions:
F-box and leucine-rich repeat protein 19 [Source:HGNC Symbol;Acc:25300]
lysine (K)-specific demethylase 2A [Source:HGNC Symbol;Acc:13606]
lysine (K)-specific demethylase 2B [Source:HGNC Symbol;Acc:13610]
Mouse Orthologues:
Fbxl19, Kdm2a, Kdm2b
Mouse Descriptions:
F-box and leucine-rich repeat protein 19 Gene [Source:MGI Symbol;Acc:MGI:3039600]
lysine (K)-specific demethylase 2A Gene [Source:MGI Symbol;Acc:MGI:1354736]
lysine (K)-specific demethylase 2B Gene [Source:MGI Symbol;Acc:MGI:1354737]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa898 Nonsense Available for shipment Available now
sa9360 Nonsense Mutation detected in F1 DNA Not yet available
sa18702 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa898
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000083103 None None 914 None 13
ENSDART00000083127 Nonsense 236 271 8 9
ENSDART00000106684 Nonsense 227 1215 7 32
ENSDART00000135067 None None 963 None 13
ENSDART00000147357 Nonsense 239 1242 8 21
Genomic Location (Zv9):
Chromosome 1 (position 45304557)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 44147776
GRCz11 1 44849079
KASP Assay ID:
554-0805.1 (used for ordering genotyping assays)
KASP Sequence:
TGATTGGTCTGCRTCTGCTACAGGTGTTTTGGTTAATCCCTCCCACGCCT[C/T]AAAACCTGGAGCTTTATGAGAACTGGGTGTTGTCAGGGAAACAAGGCGAC
Long Flanking Sequence:
TATTGAGTTGAAACTTCACATACACACTCTAGGGACATAATAAATAGAGACATTTTAATCTTGTTAAAAAAAAAAAGGCATAATAAGTCCCCTTTAAAATGTAGTATATACATTTTTTTGCTGTAATCGATTTCACTGAATATATTTTTTGGAATCAATTTAGTTGCAAAGAGGCAAATTTTTACTCCAGGCTTCCCAGTGTCGCAAATACATGAGAAATCATCCTGATGCTGATTTGGTGCTAACAAAATGGCAAATTATTATGTGTGTATTAGTTGTGTTGCTTATTATTTTTTTATGGAAGCAGAGATAAATAGTACATGAAAAGGAACAGCATTTATGCCAAATTAGTTTTCATAACATTTACTTGAATTCTATACATTTTTGCTGTTATATATTATCCTTCCCTGCATCAGCTTGCTATCAAAATATTTTTGGCCTGATTAAGTGTGATTGGTCTGCATCTGCTACAGGTGTTTTGGTTAATCCCTCCCACGCCT[C/T]AAAACCTGGAGCTTTATGAGAACTGGGTGTTGTCAGGGAAACAAGGCGACATCTTTCTTGGTGACAGGGCCACTGATTGCCAGAGGATTGAGCTCAAGCAGGGCTACACGTTCATCATTCCATCAGGTAAGCCTGAAAGACATAATCAGAAACACTATAATGCTGTTTTGGTATGAATGGCTAGAATTTTACACATTTCATAGTTTTTGTATTGAATGAATGATTGGTTTTAAAAGTGTGCATCTGTGTGTTTTTTTTTTTTTTTTTTTTTAAACGTGTAATTGGGGATACTTTTGGGTTTAGTGCATAGTTATTGCCTTCAAAACTTAAGTTGTTGTTGTTTTAGGCTGGATCCATGCTGTGTACACACCAGTGGACACGCTTGTCTTTGGTGGGAATTTTCTTCATAGTTTTAACGTCCCCATGCAATTGGACATCTCCGGCATTGAAGACAGGACACGGGTGAGGACTACGTTTTACTAACATTTTCTGTTTTTGGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9360
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000083103 Nonsense 660 914 9 13
ENSDART00000083127 None None 271 None 9
ENSDART00000106684 Nonsense 960 1215 27 32
ENSDART00000135067 Nonsense 709 963 9 13
ENSDART00000147357 Nonsense 988 1242 17 21
ENSDART00000083103 Nonsense 660 914 9 13
ENSDART00000083127 None None 271 None 9
ENSDART00000106684 Nonsense 960 1215 27 32
ENSDART00000135067 Nonsense 709 963 9 13
ENSDART00000147357 Nonsense 988 1242 17 21
Genomic Location (Zv9):
Chromosome 1 (position 45318230)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 44161449
GRCz11 1 44862752
KASP Assay ID:
2259-0938.1 (used for ordering genotyping assays)
KASP Sequence:
GGAAAYGAGCTCGGCTGTGAAAARGACATTTGGGTGTCTGTGTTTCGTTA[C/A]CTGGATCGGACAGATTTRGCTGTGTGCATGAGAGTCTGCAAGGCTTGGTT
Long Flanking Sequence:
GATGATGAGGATGGAGAAAACCAATCAGACTCTGATCCTGATCCACCAGTTTTGCTCGTCTCAGACTTGAACGATGACCTGCTGAACGATTCCTACCTGACCGTGACCCTCCATCGGCCGCCGAAGGCCAAACGTGACCCTGGCTCAATTGTCCCTAAACTAGAGGCGGCGATGTCCCCCCGCACGGGTGGCAGTTCTGGCTTCATGCAGCGAAAAACTCTTCCCAAAGCGCGGCCCAAGACCAGCAGCTCCACCCCTGCTGGAAACGGCCTCTCTCAGGCTAAAAGCGGCCGTCCCACGAGGCGAAGCTCCAACCAAGATGGCAGAGAGAGAGACACGGCGTCGCCCTCCTCCATGTCGTCTCGCTCCTCTGTTTCTCCACCTCCTCCTCCTCCAGCTGTCACCTCTTCCTCTCCTTCCCTTCTCTCACATCCTTCATTCCGTGATGCAGGAAACGAGCTCGGCTGTGAAAAGGACATTTGGGTGTCTGTGTTTCGTTA[C/A]CTGGATCGGACAGATTTAGCTGTGTGCATGAGAGTCTGCAAGGCTTGGTTTAAATGGTAAGTGCAGCACACAGTTGAGGACTACATGTAACCTAAATTGATTTTTTTTTTTTAAATTACTCCCTGGTGTTTTTATATTACTTTAAGATACACATTTTGACTAAACTAAAGGCCTGTTCACACTTGGGCTTCAGAATTATTCATACTAAGCTCTATTATGATTTTTTTTTTTGGTGTAATGCATCTCAAAATTCTGTGATTGAGCAGTACCACATAGTTTTTCACTGAAAATGCAGAACTTTTTTCTGTTTTGGGCATTAATCTATTAATGCTGATCCACACAAACTAATATCTGTGAGTTTGCTTCTCTTGTTCACCTTACTTTACATGCACAAAATATGCAGAGAAATTTTCTAATTCTAATTAGTTCTGAAAAAGTCATGGGTAACACTTTACAATAGGGTTCATTAGATAATGCATTTACTAACATCAACTAATCAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18702
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000083103 Nonsense 660 914 9 13
ENSDART00000083127 None None 271 None 9
ENSDART00000106684 Nonsense 960 1215 27 32
ENSDART00000135067 Nonsense 709 963 9 13
ENSDART00000147357 Nonsense 988 1242 17 21
ENSDART00000083103 Nonsense 660 914 9 13
ENSDART00000083127 None None 271 None 9
ENSDART00000106684 Nonsense 960 1215 27 32
ENSDART00000135067 Nonsense 709 963 9 13
ENSDART00000147357 Nonsense 988 1242 17 21
Genomic Location (Zv9):
Chromosome 1 (position 45318230)
Other Location(s):
Assembly Chromosome Position
GRCz10 1 44161449
GRCz11 1 44862752
KASP Assay ID:
2259-0938.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGAAACGAGCTCGGCTGTGAAAAGGACATTTGGGTGTCTGTGTTTCGTTA[C/A]CTGGATCGGACAGATTTAGCTGTGTGCATGAGAGTCTGCAAGGCTTGGTT
Long Flanking Sequence:
GATGATGAGGATGGAGAAAACCAATCAGACTCTGATCCTGATCCACCAGTTTTGCTCGTCTCAGACTTGAACGATGACCTGCTGAACGATTCCTACCTGACCGTGACCCTCCATCGGCCGCCGAAGGCCAAACGTGACCCTGGCTCAATTGTCCCTAAACTAGAGGCGGCGATGTCCCCCCGCACGGGTGGCAGTTCTGGCTTCATGCAGCGAAAAACTCTTCCCAAAGCGCGGCCCAAGACCAGCAGCTCCACCCCTGCTGGAAACGGCCTCTCTCAGGCTAAAAGCGGCCGTCCCACGAGGCGAAGCTCCAACCAAGATGGCAGAGAGAGAGACACGGCGTCGCCCTCCTCCATGTCGTCTCGCTCCTCTGTTTCTCCACCTCCTCCTCCTCCAGCTGTCACCTCTTCCTCTCCTTCCCTTCTCTCACATCCTTCATTCCGTGATGCAGGAAACGAGCTCGGCTGTGAAAAGGACATTTGGGTGTCTGTGTTTCGTTA[C/A]CTGGATCGGACAGATTTAGCTGTGTGCATGAGAGTCTGCAAGGCTTGGTTTAAATGGTAAGTGCAGCACACAGTTGAGGACTACATGTAACCTAAATTGATTTTTTTTTTTTAAATTACTCCCTGGTGTTTTTATATTACTTTAAGATACACATTTTGACTAAACTAAAGGCCTGTTCACACTTGGGCTTCAGAATTATTCATACTAAGCTCTATTATGATTTTTTTTTTTGGTGTAATGCATCTCAAAATTCTGTGATTGAGCAGTACCACATAGTTTTTCACTGAAAATGCAGAACTTTTTTCTGTTTTGGGCATTAATCTATTAATGCTGATCCACACAAACTAATATCTGTGAGTTTGCTTCTCTTGTTCACCTTACTTTACATGCACAAAATATGCAGAGAAATTTTCTAATTCTAATTAGTTCTGAAAAAGTCATGGGTAACACTTTACAATAGGGTTCATTAGATAATGCATTTACTAACATCAACTAATCAC
Associated Phenotype:
Not determined