ZMP

tmem180

Ensembl ID:

ENSDARG00000009214

ZFIN IDs:

ZDB-GENE-041212-83, ZDB-GENE-041212-83

Description:

transmembrane protein 180 [Source:RefSeq peptide;Acc:NP_001008654]

Human Orthologue:

TMEM180

Human Description:

transmembrane protein 180 [Source:HGNC Symbol;Acc:26196]

Mouse Orthologue:

Tmem180

Mouse Description:

transmembrane protein 180 Gene [Source:MGI Symbol;Acc:MGI:1922396]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa45471	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa8936	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa45471

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000004769	Essential Splice Site	None	504	1	9
ENSDART00000130853	None	None	504	None	8

Genomic Location (Zv9):

Chromosome 12 (position 35390929)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	33793710
GRCz11	12	33894693

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCACGGAATCCACTGATAGTATTGTGTTTCTATTGAGAGGAATCAGCTGG[G/T]TAAGTGTGTCTGTCTGTCTGCTGGCTGTGACTTGGTCCACGTCGCATTGC

Long Flanking Sequence:

ATTACTTAAATAACTATAAATAAATTACTATAAATAACTAAAAAAGAAATATACTAAGCAATCAATTTTATACAAAATATACTCCTCCGTGACTGAAAGTTGCCGCTTGCTCACGTCTGTTTTTAAAAGAAAATGTGCCAAATAATAGTGGAATGATGAATTTTCTCATTTGTCACACTAAAACTGTACTACAGTTTAAAGATGTGCAGTTTATAATCACGACAGTACAGTATTTGAGCGCGTGCCCGTCTGTTTGTGTGTATGAGCCTGAACGCGCACAGATGGCAGCGAGGAGGAGGGAAGACTCGTGACGTCACGGGCTTCCTCGTCCAACACATGACATGTTTCGATACAACCGTGAAACCTAGAATCGTTTATTGATCATCAGGTGACCGACGCTTTGACACCAGCTCCACATGGTAAGTGTTTTAACAGTCTAACCATATAAAACCACGGAATCCACTGATAGTATTGTGTTTCTATTGAGAGGAATCAGCTGG[G/T]TAAGTGTGTCTGTCTGTCTGCTGGCTGTGACTTGGTCCACGTCGCATTGCTTGATATGAAAGCGGATAGCCTGCTAGCAAGCAAGCTTAACTTACCACAGGATTAGTGGTAGTTAAGAGGTTATGGTGGGTTTAAATTGGCACGAATTGGGTCGAACTCATTGTTTGATGATATATTCATTATTTTTCTTTAACCATAATGTGATTCATCTGGTTAGATTTAGATACCCGGGATCATGTTGTTTAATTACTATGAGGAAAGTCGCTAATGTGAGCGGCTAGCATAAGACCTGTTAGAAAAACATGGTAATACCATGTCAGTTAGAATGGAGCAATTTATCAAAATTAAGACGAAATATTCGAGTTTGTTCATAAACGAATGTGTTTACGAGAATATTAAATGTAATATTAAAACGTTATCGTCGAGATAACTTTAGAAGTGATTCTGGCAGTTTCATTTCTCCCTTTAACGGTTCATTGTTTAGATGTTTGAATCAGTAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa8936

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000004769	Nonsense	491	504	9	9
ENSDART00000130853	Nonsense	491	504	8	8

Genomic Location (Zv9):

Chromosome 12 (position 35408905)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	33811686
GRCz11	12	33912669

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CTCGCTTCACTCTGCAYGGGCGCAGGCTACAAAACATYAAGACTCTTCGA[C/T]AGAGTGCCCAACACAGCCACCTCATAGATGTCAAGGCTATATAACACTCC

Long Flanking Sequence:

TAAAGTTGACTTAATATTGTACGGCAACTTGCTGCACGGCTTTTTTGATCTGTCTCGGCTTTTAACCAAATAACTGCAATTGACTCGATTTAAGTTGGGACAACTAAAAAAGCACTGCAGCAAGTTGCCTTAAAATCATGTTTCTTTTTTTGCAGTGTATCAGCAGTCCAAAAGAAGTCCGATAAAGCCCATCCATCCATAATAAAAACTGCCTCCTTGCTGAAGCACAGTATCGATTTCCTCATCTCGCATAAACTTGCTGTATCTTCAAGTCTCCTCATTCTCTCTGTGATTTATTTCTTTCTCCAGGATATGACATCTTCGAGAGGAACTCTGTAGCAGAAGCCCCGATTGCAGCTCCTGCGCTTCCCGTGCCGCTACGTCAGGGTTGCTTTTACCTGCTGGTGTTTGTGCCCATTTCCTGTGCCCTTCTTCAGCTGCTGGCATGGTCTCGCTTCACTCTGCATGGGCGCAGGCTACAAAACATCAAGACTCTTCGA[C/T]AGAGTGCCCAACACAGCCACCTCATAGATGTCAAGGCTATATAACACTCCTGTAAAAAGAAAAAGACAGATGAGCAGCGGGCATTTCCCCAAAACCAGACCTTCAGTAGAGAATAGTGAGGCCAAATACTGCAGCAGACACTCAACACAGAATGTATGGTCCCGTTTTATTATAACCTGCCTTAATTTGCTACGTTTGGGTATTTATATTGAGTATGTGACCAAATATGAATAGGGATATGAGAGTCTTGAGGTTTTGGGACCATATTGATCAATACAACCAACTGCCGTCAAGTATGTAGTTTAATGGGTTGATAATCAAGCCAAATCTGTTTGCATCTCCCTTGTCTGTATGTGACAATACACACTGTGTTTTAAGAAAGGGCACGTTTACAGTAAGTGTTCATTGGTATTCCAGGGATACATGTTGGTTTTGGAAACGCATGGATGTTTGTTGATACTATCTTTGTCGTTCAGGCGGGTGTGAAGAGTTGTGTCGTG

Associated Phenotype:

Not determined