ZMP

LOC100329245

Ensembl ID:

ENSDARG00000017649

Human Orthologue:

CDH7

Human Description:

cadherin 7, type 2 [Source:HGNC Symbol;Acc:1766]

Mouse Orthologue:

Cdh7

Mouse Description:

cadherin 7, type 2 Gene [Source:MGI Symbol;Acc:MGI:2442792]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa5068	Nonsense	F2 line generated	Not yet available
sa8860	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa5068

Status:

F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000055488	Nonsense	36	765	1	12

Genomic Location (Zv9):

Chromosome 24 (position 42792)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	24	40698
GRCz11	24	40698

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GGCTGCTGGCAGCTCCTCTGGAGAACATGAGCTCTRCTGACAGGCGGTCC[A/T]AACACCCTGAACACCCGGAGCCCTCACAGGCTGTCCTGCAGAGGCAGAAG

Long Flanking Sequence:

TGCCCTTTCAGGAGATTTCTAGAGTGTGAATGAGTGTGAGGAGGAGGAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGAAGAAGAAGAAGAGGAGGAGGAGGAGAACGAGGAGGAGGAGGAGGAGGCCGCACGACTGCTGCACTCAGATGATCTCAGTAATCATGATGAGGATGAAAGCGCTTGTCATTGGGAGACGTCGTCTACATCATGCTGCAGTTTGGGGGTTTCTGCTGTAATCCCGCTCTCTGTCCTGCAGACCCACTCTGAGATGTCTGAATAGATCTGGAATGACCCGTGTGTCAGAGCAGCTCATTCTCATCATCTCTGGCTCATTATTATTGGACTGTTTCTCACTTGAACACACACACGTCTGCTCAGAATCACAGCAGACCTTCAGCTGGTCCACATGGCCCAGTGTGTGCGTCTGTGTTTGCTGTGCTGGGCGCTCGGGCTGCTGGCAGCTCCTCTGGAGAACATGAGCTCTGCTGACAGGCGGTCC[A/T]AACACCCTGAACACCCGGAGCCCTCACAGGCTGTCCTGCAGAGGCAGAAGCGCAGCTGGGTCTGGAACCAGTTCTTCGTGCTGGAGGAACACACCGGCACAGACCCGCTGTACGTCGGCAAGGTAAGACCCCGCACCGCTGCTGTTTATCTGCTGTTCAGAGATGCTAAATCGAGAATCCGAGAGTTTCTCTCTGACTCCGCATGTGATGAAGGTGTAGAGCGTGAACATGAGACGATGACAGGACAGAAGCTGTCTAATCCTGCTGCTCTGCAGCTTCATCTCAGAATTTACTAGTTTGAGCAGAGCCGGCTTCCCCTCACACTGCCCTACATCTGCTGCAGGCTTATTAGCAGGAGACTCTGTGAAGCGCAGCTCTCTGCCTTTGACTGACTCTGGGTCAGTTTTGACTGACCGCTCTTCATGCAGAAACACCAGCGGCAGCTCAGAGAACAGCGTTCACAAGAGTCAAACACTGGAGGCAAGAAGAGGGGAAACAAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa8860

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000055488	Essential Splice Site	333	765	5	12

Genomic Location (Zv9):

Chromosome 24 (position 39786)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	24	37692
GRCz11	24	37692

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GCATCAGCACTGATGAGGAGACACRAGAGGCAGTCATTATCCTCCAGCAG[G/A]TCAGACCACAGTGGCCAGCAGGAGAAATGATTCATTAGACTGATCAGAGA

Long Flanking Sequence:

CGTCTGTCGTCAGATTCTTTCCATCCTCTTCTTTGAGCGTGTTAAAGCACATGTATGCCATGTTTCAGGTCAGATTGAACTCGCTGTTCTGTATTTTGTATTGCGTTTAGCTTCTTATTCTACACTTGTTGTTATTTTATGCCGTTTTCCTTTTCTCTCCCCTTCAGTCATTGTTTGTGTTGTATTGTTGTTCACGGATGTAATGTTAGTTTGTGTTTGTTTATTTTCTGGGTTCTGATCCATTCTAAGAGCCTCTTGGGTGTTAACGCTAATAAATGAAGTAAACGAACCTGCATGTTCGGTCTCCTGTAGAGCGGTACGAGTTCTCGGTGCTGGAGTCAGCATCTGTGCTGTTAGCGGTGGCCAGACTGAAGGCTGCAGATGCTGACATCGGCTCCAATGCAGAGCTGGACTACAGTATAGTGGATGGAGACGCAGCCGGAGCTTTCAGCATCAGCACTGATGAGGAGACACGAGAGGCAGTCATTATCCTCCAGCAG[G/A]TCAGACCACAGTGGCCAGCAGGAGAAATGATTCATTAGACTGATCAGAGATGCCCGTATCCGCATATCAGAGAAGCAATAGCTGAGGTTTAGACTGGTGTTAGGAGAAATCTCTACTTTCCCAAACCCTAACAATCCCTAGCACATCAATAGTTAACCCTAACCCACCCTCTCCCTCTCCGTCTCTCTCTCCAGCCTTTGGACTATGAAACTAAAAGCACTTTTTCTCTGAAGATTGAAGCCACGAATCGAAACATTGACCCTCAGTTTGCGACCTTTGACCCCTTCAGTGATACGGCGACTGTGGAGATTATTGTAGAAGATGTAAATGAGCCGCCGGTGTTCTCCACACCCGTCAGTCACTTTCAGGTTTCGGAGGCGGTGAAGGTTGGCACTGTCATCGGTACGGTGTCAGCCCACGACCCAGACTCCTCCAGCTCTGCTATTAGGTAAACACTTTATTTATCTTCAGGTACACGATCAGACTGCTTCTGATTCATA

Associated Phenotype:

Not determined