ZMP
thumpd3
Ensembl ID:
ZFIN ID:
Description:
THUMP domain-containing protein 3 [Source:RefSeq peptide;Acc:NP_001082863]
Human Orthologue:
THUMPD3
Human Description:
THUMP domain containing 3 [Source:HGNC Symbol;Acc:24493]
Mouse Orthologue:
Thumpd3
Mouse Description:
THUMP domain containing 3 Gene [Source:MGI Symbol;Acc:MGI:1277973]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa40689 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa8793 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa8825 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa1193 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa40689
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000083070 | Nonsense | 234 | 477 | 5 | 11 |
ENSDART00000135959 | Nonsense | 239 | 482 | 5 | 10 |
ENSDART00000136271 | None | None | 152 | None | 4 |
ENSDART00000143378 | None | None | 236 | None | 4 |
ENSDART00000146307 | None | None | 193 | None | 4 |
ENSDART00000147507 | Nonsense | 239 | 271 | 5 | 5 |
The following transcripts of ENSDARG00000059634 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 6 (position 23684104)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19939550 |
GRCz11 | 6 | 21999772 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTAACAGGAGGGCTAATAATTCAGTTTTTCTCTTATTTACTAGGTGCTGT[T/G]AAATATCCACAATAATGAAGTTGTGGTTGGCATTGCGCTTACCGTGGAGA
Long Flanking Sequence:
TCAGAGCGCAATTAATATTGGGATGTTCGAGGCGGCAAAGGATCTACTGTTTGTGTCCTTCATTATCTGGAAAACGAAGGACACATTTTGTGGCTGCATTAGAAGAAGCCTTCAAATTTTTTTTAAATGAGACGGCCTTTCGATGACGCAGTGCCCTTGGAATGCATTCTGCGGAGGATGCAGCCTCTGAAATGAGACACAGCTAAACACTTGCCTAATTACGATAACTTGCCTAGTTAATCTAATTAACCTTGTGCCTTTAAATTGCACTTTAAGCTGAATACTAATATCTTAGGAAATATGTTGTCAAATATTATTTACTGTCATCATGGCAAAGATAAAAGAAAACAGTTTTTAGAAATTAGTTATTAAAACTATTATGTTTAGAAAGAGGTAAAAAATTCTTCTCTCTGTTTAACAATTTTGGGGAATATATAAAAGAACTCAAATTTAACAGGAGGGCTAATAATTCAGTTTTTCTCTTATTTACTAGGTGCTGT[T/G]AAATATCCACAATAATGAAGTTGTGGTTGGCATTGCGCTTACCGTGGAGAGTCTGCATAGGAGAAACATCACTCACTTCGGTCCCACAACTCTGCGCTCTACACTGGCTTATGGCATGCTTAGGTCAGTGATATTCCTGTAAAGCATCACACCATCAACAGCCAGACAGAACATTTTATTGACAAATGTTTCATTTAGTTACAATTGTTGTATTAAGGCAATTTAAGAATATTAAGAGGGAAGTATTACAATAAAAACTTATTTAAACTCAACATACAAAATTATTGATAAAAAAATATGGGTTTTACTAATGCAAAAATACATCACAGACAAGCAAAAACACTCATGCCATTATGGTATACACTGGAAGCATACATCTAGTGCAGTAAAAATTGATTGGCTGTTTTTGTATTTCCTTAGCAGCCAATCTCCAGCATATTTTGGAATAAGAAGATTTCTTTGTATTAGCAAATATTAAACTTTTACTATCTAAGCAAAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa8793
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000083070 | Nonsense | 333 | 477 | 7 | 11 |
ENSDART00000135959 | Nonsense | 338 | 482 | 7 | 10 |
ENSDART00000136271 | None | None | 152 | None | 4 |
ENSDART00000143378 | None | None | 236 | None | 4 |
ENSDART00000146307 | None | None | 193 | None | 4 |
ENSDART00000147507 | None | None | 271 | None | 5 |
ENSDART00000083070 | Nonsense | 333 | 477 | 7 | 11 |
ENSDART00000135959 | Nonsense | 338 | 482 | 7 | 10 |
ENSDART00000136271 | None | None | 152 | None | 4 |
ENSDART00000143378 | None | None | 236 | None | 4 |
ENSDART00000146307 | None | None | 193 | None | 4 |
ENSDART00000147507 | None | None | 271 | None | 5 |
The following transcripts of ENSDARG00000059634 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 6 (position 23686375)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19941821 |
GRCz11 | 6 | 22002043 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGCAGTCAGCCGATCAGTCAAYAATATCAAGCACATTCTGAAGAAAACA[C/T]AGGATGGAGGAAGGTGAGGCTTTTGATCGTSTCCTGTAAACYTTTTGGAA
Long Flanking Sequence:
TTTGCATGTAGTCCTCTGTCATTATAAACAGAAACTAAAGTGTTAAACATATACTTTTGGAATGGCCTATTTTAAATGTAATCAGACAACGATTTTTGTCTGGAGAGTCTTTAAAGGAAATATTTTTTTTAAATAAATTCAAAAACTACAATTTTTATCAAAGTAAACAGTAAACCTTAAAAACATAAGATTTTATCTAATGTATTTTAGCTTATGTAGTGCTGTTGATATCTGTTTGTCATTATAGTTTTTTATTGTAGAAAAGTGAGATTTATAAAATGTAAATTTGATCTGGTTTTGCCATGAGAGAAGCTGATGTGCCAATAAATTCAAAACTCTCTTTTCCTTCTGTCATTATACTTCTGTGTCTGAAATATTATCAAAAATCTTTGTTTTAGGGAGCTATGGAATGGCAGAATTCATTCTTTATAGCTGGAGACAACAACGGCACAGCAGTCAGCCGATCAGTCAACAATATCAAGCACATTCTGAAGAAAACA[C/T]AGGATGGAGGAAGGTGAGGCTTTTGATCGTGTCCTGTAAACTTTTTGGAATCATTTTGTAAGTGTTGTTTTAGTATTATTCTAATTAATTTGAAATTTTTTAACTTAAATAGTTTGATATTTTCATTAGTGCTTTTTGTATATGTCCTTAGCGTTCAGTAAATTTAGTAGATCTATGTCATTTTTGGCCCAGTTAAATGTAAAGGCAACATTTACTTTGTTTTTCTATCTCCTTTTGCATAATACATGGGTACATTATATTTTTGTGCGTAGTATATGTCCAAAATTTCATGGTGTGAGTTTTTTTTTTTCATGGTAACAATATATATTACTGGTCACCTTATTAGATGCATCTTACTTTTGCCTTCAGAACTGTCCTAATACTTTGTGGCATAGATTCAACAAGGTACTAGAAATATTCCTCAGATTTTGGTCCACATTAACATGATAGCATCACACAGTCGCTGCAGATTTGTTGGCTGCACATCCATAATGCGAATC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa8825
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000083070 | Nonsense | 333 | 477 | 7 | 11 |
ENSDART00000135959 | Nonsense | 338 | 482 | 7 | 10 |
ENSDART00000136271 | None | None | 152 | None | 4 |
ENSDART00000143378 | None | None | 236 | None | 4 |
ENSDART00000146307 | None | None | 193 | None | 4 |
ENSDART00000147507 | None | None | 271 | None | 5 |
ENSDART00000083070 | Nonsense | 333 | 477 | 7 | 11 |
ENSDART00000135959 | Nonsense | 338 | 482 | 7 | 10 |
ENSDART00000136271 | None | None | 152 | None | 4 |
ENSDART00000143378 | None | None | 236 | None | 4 |
ENSDART00000146307 | None | None | 193 | None | 4 |
ENSDART00000147507 | None | None | 271 | None | 5 |
The following transcripts of ENSDARG00000059634 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 6 (position 23686375)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19941821 |
GRCz11 | 6 | 22002043 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGCAGTCAGCCGATCAGTCAAYAATATCAAGCACATTCTGAAGAAAACA[C/T]AGGATGGAGGAAGGTGAGGCTTTTGATCGTSTCCTGTAAACYTTTTGGAA
Long Flanking Sequence:
TTTGCATGTAGTCCTCTGTCATTATAAACAGAAACTAAAGTGTTAAACATATACTTTTGGAATGGCCTATTTTAAATGTAATCAGACAACGATTTTTGTCTGGAGAGTCTTTAAAGGAAATATTTTTTTTAAATAAATTCAAAAACTACAATTTTTATCAAAGTAAACAGTAAACCTTAAAAACATAAGATTTTATCTAATGTATTTTAGCTTATGTAGTGCTGTTGATATCTGTTTGTCATTATAGTTTTTTATTGTAGAAAAGTGAGATTTATAAAATGTAAATTTGATCTGGTTTTGCCATGAGAGAAGCTGATGTGCCAATAAATTCAAAACTCTCTTTTCCTTCTGTCATTATACTTCTGTGTCTGAAATATTATCAAAAATCTTTGTTTTAGGGAGCTATGGAATGGCAGAATTCATTCTTTATAGCTGGAGACAACAACGGCACAGCAGTCAGCCGATCAGTCAACAATATCAAGCACATTCTGAAGAAAACA[C/T]AGGATGGAGGAAGGTGAGGCTTTTGATCGTGTCCTGTAAACTTTTTGGAATCATTTTGTAAGTGTTGTTTTAGTATTATTCTAATTAATTTGAAATTTTTTAACTTAAATAGTTTGATATTTTCATTAGTGCTTTTTGTATATGTCCTTAGCGTTCAGTAAATTTAGTAGATCTATGTCATTTTTGGCCCAGTTAAATGTAAAGGCAACATTTACTTTGTTTTTCTATCTCCTTTTGCATAATACATGGGTACATTATATTTTTGTGCGTAGTATATGTCCAAAATTTCATGGTGTGAGTTTTTTTTTTTCATGGTAACAATATATATTACTGGTCACCTTATTAGATGCATCTTACTTTTGCCTTCAGAACTGTCCTAATACTTTGTGGCATAGATTCAACAAGGTACTAGAAATATTCCTCAGATTTTGGTCCACATTAACATGATAGCATCACACAGTCGCTGCAGATTTGTTGGCTGCACATCCATAATGCGAATC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1193
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000083070 | Nonsense | 347 | 477 | 8 | 11 |
ENSDART00000135959 | Nonsense | 352 | 482 | 8 | 10 |
ENSDART00000136271 | None | None | 152 | None | 4 |
ENSDART00000143378 | None | None | 236 | None | 4 |
ENSDART00000146307 | None | None | 193 | None | 4 |
ENSDART00000147507 | None | None | 271 | None | 5 |
The following transcripts of ENSDARG00000059634 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 6 (position 23689053)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19944499 |
GRCz11 | 6 | 22004721 |
KASP Assay ID:
554-1102.1 (used for ordering genotyping assays)
KASP Sequence:
ATGTCTTATTTTCTATTTATAGCCCCTCGGGCTTGCCCTTAGACATTGTG[C/T]AGTGGGACTTGTGCAATTTGCCCATGAGAAGCAGTTCAGTGGACATCATC
Long Flanking Sequence:
ATCTGCCTCAAGATTCGACGAGTTGTGCATTCAGAGATGCTCCTCTGCATACCTGGATTGTAACGAGTGGTTATTTGAGTTACTGTTGCCTTTTTATCAGCTCGAACCAGTCTGGCCATTCTTTTATGGCATCAACAAAGTATTTGCCTAATAAACGACATGACCATCACATTAGTATGATGTACCTAGTGTACCTAATAAAGTGGCCAGTGAGTGTTTATATTTCATTAGATACTTATTTAAATGGGTAGGTATTCTGTAAGAATGAACAAAAAGGATTTCATAAAAGAAATAAACTTAAATACTGAAAAAGACAATACCTTTTTTTGCTTTTATTTTTTATTACTTTTTATATCTTTTTATTACTTAAATCCTTTTATTTAATAACAATTATTCTGATAGACCCAAATTTTATTGTGTCACAATGAAAAAAAAGTTGAAGTGCTTGCTATGTCTTATTTTCTATTTATAGCCCCTCGGGCTTGCCCTTAGACATTGTG[C/T]AGTGGGACTTGTGCAATTTGCCCATGAGAAGCAGTTCAGTGGACATCATCATCACTGACATGCCTTTTGGAAAGAGGTACTGACAGACTTAAGTAGCTGTAAAACAATTGTACAATAATTATGTATAGTATAAAACATTGCAGGTCATCGGAATGCTCATAATAACCGATTCACCAATAACTGAAAGAGTGCGTTTTAACCGCTTAATGGTATCAGTTAAGTAATTAAAAAATATTAGTTAATATTTTAATTGGCTGCATAAATGTGCAACACATATATATTAAATCACAACATACTACATACATATTTTGCTGAAGAAGCCAAATGAAAGTAGAATTTTGCTGGTCACAGTTTGACAGACGAGTTGATGCCAAACAGTGCTGATGTTGATTGCCTCTGCTTCGGAAACAAGCCGGCCCCAATTCGGAGAGTCTGGATTATCTCTCCATCAGAGCACACTCCGGCATTGCTCATAAGCACAACAAATAGGCTATATTTGT
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |