Busch Lab

ZMP

lingo4b

Ensembl ID:
ENSDARG00000078527
ZFIN ID:
ZDB-GENE-091214-3
Description:
leucine rich repeat and Ig domain containing 4b [Source:RefSeq peptide;Acc:NP_001082850]
Human Orthologue:
LINGO4
Human Description:
leucine rich repeat and Ig domain containing 4 [Source:HGNC Symbol;Acc:31814]
Mouse Orthologue:
Lingo4
Mouse Description:
leucine rich repeat and Ig domain containing 4 Gene [Source:MGI Symbol;Acc:MGI:2444651]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa42748 Nonsense Mutation detected in F1 DNA Not yet available
sa8790 Nonsense Mutation detected in F1 DNA Not yet available
sa39106 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa42748
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000047931 Nonsense 133 604 1 1
Genomic Location (Zv9):
Chromosome 16 (position 31718648)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 29523734
GRCz11 16 29458357
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCGTCTCAAGATCCTGCCAGTCGGGGTTTTCTCCGGCCTCTCCAACCTT[C/T]GACGTCTGGATATCAGTGAGAATGAGATCCTGGTTTTCCTGGATTACACA
Long Flanking Sequence:
ATTCATTTGAAAGAATCTGAATGATTAGAGTAACAACCTATCTACAGTGTTCCTTTCCTAAACTGTGTTTCTTGCATATGTTTATCTCATAGGAAGGAGGTAAGATGTTCCTGGATTTGTGTGGTCAGCGGGGCGCATGGACCGTCCTGCTGCTGTGGTGCCTGAACTTGTCAGCTGCAGACCTCCCCTGCCCTCAGAGGTGCAGCTGCTCCCGAGACCCTCTGGAGGTCAACTGCTCTTCGAGACACCTGACTGCTGTGCCTGAGGGTTTACCCACCAATGCCAAACGCTTGGATCTTTCAGGAAACCAGCTGAAAACGCTGGCTAGGCGTCAGTTCTCCAGCCTGTCAAAGCTGGAGGACCTGGACTTGAGTGAGAACATAATCTCCATGATTGAGGTGGAAACATTTCAGGGTCTGAAGAACCTGCGATACTTGAGGATTAAGAACAACCGTCTCAAGATCCTGCCAGTCGGGGTTTTCTCCGGCCTCTCCAACCTT[C/T]GACGTCTGGATATCAGTGAGAATGAGATCCTGGTTTTCCTGGATTACACATTCAGGGATATGATTAACTTGCAGCAGCTGGACGCAGGGGAAAATGACCTGGTGTTTATCTCGCAGCGTGCGTTTGTTGGGCTTCAGGCACTGAAGGAGCTGAACGTGGACCGCAGCAATCTGACCTCCATCCCAACCGAAGCTCTGTCGCAACTTCAGAGCTTGACTAAGCTGCGTCTGCGCAAGCTCACTATTAGCGTGCTGCCCAACAATGCCTTTCGCCGACTGCACCAGCTGCGTACTTTGCAGATCCTCCACTGGAGTTCTCTCGAGATGCTGAACAGCAACAGCTTGGTCGGCCTGAACCTGACCACTTTAGTTTTAACCAACTGCAATCTTAGTGCCATACCTTACTCTCCCCTGCGCCATCTTGCCTACCTGCAGTACCTTGATCTATCCTACAACCCCATCACCTCCATACAGGGCAACCTTTTGGGGGATCTTCTGAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa8790
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000047931 Nonsense 446 604 1 1
Genomic Location (Zv9):
Chromosome 16 (position 31717708)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 29522794
GRCz11 16 29457417
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTTGACTGCAAAGCAGATGGCTATCCATCACCGTCTATAACCTGGCTGT[C/A]AGCCCAACAGTCTGCACTTAGCTCTGCCGGGAGAGTACGAGTGCTTACTA
Long Flanking Sequence:
TGATCTATCCTACAACCCCATCACCTCCATACAGGGCAACCTTTTGGGGGATCTTCTGAGACTCCAAGAGTTGCACCTGGTGGGTGGAAACCTGCTACGGATAGAGCCAGGTGCCTTTAGGGGTCTGTCCCGCTTTCGCTTACTCAATGTGTCCTCAAATCGTCTGTCCACACTGGAAGAAAGCGCCTTTCACTCTGTGGGGAACCTGCAGACACTGCGGCTGGACAGAAACCCGTTGGCTTGTGACTGTAGGCTACTCTGGGTGATGCGACGGCGTCGGCGGCTGGATTTTGATGGCCGGCAACCCACTTGTTCACCCCTGAATCATCAGAGGAAGGCATTTCGGGACTTCTCAGAGGCAGAGCTTCCGGTTGTTTTTACGTGCAGACAGGCGCAGATCCTGAACCGACAGCTGCAGGATATAAGCGTGATTGAGGGAATGAGAGTACATTTTGACTGCAAAGCAGATGGCTATCCATCACCGTCTATAACCTGGCTGT[C/A]AGCCCAACAGTCTGCACTTAGCTCTGCCGGGAGAGTACGAGTGCTTACTAATGGGAGTTTACAGATCAGTTATGCGCAAGTACAAGACAGTGGAACATATTTATGTAGCGCAGCTAATGCTGCAGGTAATGACAGCATCTCTGTGAGTCTGCATGTGGAGGGGCTTCCACAAAACCGCACAGTGTCATATTTCTCAGACGAGGGATGGATAGAAACTTCAGCACCTCCATCTACCAACTCCTCAGCTCGGGTGTCAAGTCCTTACCCGTTTGATGCTAAAACCCTCATCATTGCTACCACCATGGGATTTCTGTCTTTTCTCAGCTCTGTTGCAATCTGTTTTGTGTTTATGTTCTTCTGGAGTCAGAGCAAAGGTCAGATAAAACACACTGCCACAATAGACTTTGTGCCACGATCATCTATGGGTGGAGGTGGAGATGGTGGAGACACCGGAAGATTCACAATGAAGCTTATTTGAGCTGGAATGGAGAATCCATGGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39106
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000047931 Nonsense 591 604 1 1
Genomic Location (Zv9):
Chromosome 16 (position 31717274)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 29522360
GRCz11 16 29456983
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACACACTGCCACAATAGACTTTGTGCCACGATCATCTATGGGTGGAGGT[G/T]GAGATGGTGGAGACACCGGAAGATTCACAATGAAGCTTATTTGAGCTGGA
Long Flanking Sequence:
AGGGAATGAGAGTACATTTTGACTGCAAAGCAGATGGCTATCCATCACCGTCTATAACCTGGCTGTCAGCCCAACAGTCTGCACTTAGCTCTGCCGGGAGAGTACGAGTGCTTACTAATGGGAGTTTACAGATCAGTTATGCGCAAGTACAAGACAGTGGAACATATTTATGTAGCGCAGCTAATGCTGCAGGTAATGACAGCATCTCTGTGAGTCTGCATGTGGAGGGGCTTCCACAAAACCGCACAGTGTCATATTTCTCAGACGAGGGATGGATAGAAACTTCAGCACCTCCATCTACCAACTCCTCAGCTCGGGTGTCAAGTCCTTACCCGTTTGATGCTAAAACCCTCATCATTGCTACCACCATGGGATTTCTGTCTTTTCTCAGCTCTGTTGCAATCTGTTTTGTGTTTATGTTCTTCTGGAGTCAGAGCAAAGGTCAGATAAAACACACTGCCACAATAGACTTTGTGCCACGATCATCTATGGGTGGAGGT[G/T]GAGATGGTGGAGACACCGGAAGATTCACAATGAAGCTTATTTGAGCTGGAATGGAGAATCCATGGTTTTTCTTACACATAGTTGAGCCTTTAAAACGGTTGTACACTCTTAAAGTTTTTTTTTACAGTGATGCCATAGAAGAATCATTTAGGGTTCCATAAAGGACTTTCAGTGAATTGTTCTTCACACAAAGAACAAAATGTTCTTTTAAGAACTATGTAATAATATAAAGCACTGTTTTTTGTAACTGAAAAGAATATTTTGAGGAATGGAAAGGTTTTATGGATGTCAATGCCGAAAAAGAACCTTTATTTTTGAAGGTTTACTGTAACTCTCAAAGTGCAGAAGAAACTTATCCATCACTCATTATTAATAGTTAAAAACTATGATTTCTTAGTGATGCTATTGTAGAACTATTTTTGTTCCCCAAATAACCTATCAGTGTATGGTTCTTAAAAGAACTCATTTTTAAATGTAGAATCTAAAATGAATCTTATGGA
Associated Phenotype:
Not determined