ZMP
lingo4b
Ensembl ID:
ZFIN ID:
Description:
leucine rich repeat and Ig domain containing 4b [Source:RefSeq peptide;Acc:NP_001082850]
Human Orthologue:
LINGO4
Human Description:
leucine rich repeat and Ig domain containing 4 [Source:HGNC Symbol;Acc:31814]
Mouse Orthologue:
Lingo4
Mouse Description:
leucine rich repeat and Ig domain containing 4 Gene [Source:MGI Symbol;Acc:MGI:2444651]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa42748 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa8790 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa39106 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa42748
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047931 | Nonsense | 133 | 604 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 16 (position 31718648)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 29523734 |
GRCz11 | 16 | 29458357 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCGTCTCAAGATCCTGCCAGTCGGGGTTTTCTCCGGCCTCTCCAACCTT[C/T]GACGTCTGGATATCAGTGAGAATGAGATCCTGGTTTTCCTGGATTACACA
Long Flanking Sequence:
ATTCATTTGAAAGAATCTGAATGATTAGAGTAACAACCTATCTACAGTGTTCCTTTCCTAAACTGTGTTTCTTGCATATGTTTATCTCATAGGAAGGAGGTAAGATGTTCCTGGATTTGTGTGGTCAGCGGGGCGCATGGACCGTCCTGCTGCTGTGGTGCCTGAACTTGTCAGCTGCAGACCTCCCCTGCCCTCAGAGGTGCAGCTGCTCCCGAGACCCTCTGGAGGTCAACTGCTCTTCGAGACACCTGACTGCTGTGCCTGAGGGTTTACCCACCAATGCCAAACGCTTGGATCTTTCAGGAAACCAGCTGAAAACGCTGGCTAGGCGTCAGTTCTCCAGCCTGTCAAAGCTGGAGGACCTGGACTTGAGTGAGAACATAATCTCCATGATTGAGGTGGAAACATTTCAGGGTCTGAAGAACCTGCGATACTTGAGGATTAAGAACAACCGTCTCAAGATCCTGCCAGTCGGGGTTTTCTCCGGCCTCTCCAACCTT[C/T]GACGTCTGGATATCAGTGAGAATGAGATCCTGGTTTTCCTGGATTACACATTCAGGGATATGATTAACTTGCAGCAGCTGGACGCAGGGGAAAATGACCTGGTGTTTATCTCGCAGCGTGCGTTTGTTGGGCTTCAGGCACTGAAGGAGCTGAACGTGGACCGCAGCAATCTGACCTCCATCCCAACCGAAGCTCTGTCGCAACTTCAGAGCTTGACTAAGCTGCGTCTGCGCAAGCTCACTATTAGCGTGCTGCCCAACAATGCCTTTCGCCGACTGCACCAGCTGCGTACTTTGCAGATCCTCCACTGGAGTTCTCTCGAGATGCTGAACAGCAACAGCTTGGTCGGCCTGAACCTGACCACTTTAGTTTTAACCAACTGCAATCTTAGTGCCATACCTTACTCTCCCCTGCGCCATCTTGCCTACCTGCAGTACCTTGATCTATCCTACAACCCCATCACCTCCATACAGGGCAACCTTTTGGGGGATCTTCTGAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa8790
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047931 | Nonsense | 446 | 604 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 16 (position 31717708)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 29522794 |
GRCz11 | 16 | 29457417 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTTGACTGCAAAGCAGATGGCTATCCATCACCGTCTATAACCTGGCTGT[C/A]AGCCCAACAGTCTGCACTTAGCTCTGCCGGGAGAGTACGAGTGCTTACTA
Long Flanking Sequence:
TGATCTATCCTACAACCCCATCACCTCCATACAGGGCAACCTTTTGGGGGATCTTCTGAGACTCCAAGAGTTGCACCTGGTGGGTGGAAACCTGCTACGGATAGAGCCAGGTGCCTTTAGGGGTCTGTCCCGCTTTCGCTTACTCAATGTGTCCTCAAATCGTCTGTCCACACTGGAAGAAAGCGCCTTTCACTCTGTGGGGAACCTGCAGACACTGCGGCTGGACAGAAACCCGTTGGCTTGTGACTGTAGGCTACTCTGGGTGATGCGACGGCGTCGGCGGCTGGATTTTGATGGCCGGCAACCCACTTGTTCACCCCTGAATCATCAGAGGAAGGCATTTCGGGACTTCTCAGAGGCAGAGCTTCCGGTTGTTTTTACGTGCAGACAGGCGCAGATCCTGAACCGACAGCTGCAGGATATAAGCGTGATTGAGGGAATGAGAGTACATTTTGACTGCAAAGCAGATGGCTATCCATCACCGTCTATAACCTGGCTGT[C/A]AGCCCAACAGTCTGCACTTAGCTCTGCCGGGAGAGTACGAGTGCTTACTAATGGGAGTTTACAGATCAGTTATGCGCAAGTACAAGACAGTGGAACATATTTATGTAGCGCAGCTAATGCTGCAGGTAATGACAGCATCTCTGTGAGTCTGCATGTGGAGGGGCTTCCACAAAACCGCACAGTGTCATATTTCTCAGACGAGGGATGGATAGAAACTTCAGCACCTCCATCTACCAACTCCTCAGCTCGGGTGTCAAGTCCTTACCCGTTTGATGCTAAAACCCTCATCATTGCTACCACCATGGGATTTCTGTCTTTTCTCAGCTCTGTTGCAATCTGTTTTGTGTTTATGTTCTTCTGGAGTCAGAGCAAAGGTCAGATAAAACACACTGCCACAATAGACTTTGTGCCACGATCATCTATGGGTGGAGGTGGAGATGGTGGAGACACCGGAAGATTCACAATGAAGCTTATTTGAGCTGGAATGGAGAATCCATGGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39106
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047931 | Nonsense | 591 | 604 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 16 (position 31717274)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 29522360 |
GRCz11 | 16 | 29456983 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACACACTGCCACAATAGACTTTGTGCCACGATCATCTATGGGTGGAGGT[G/T]GAGATGGTGGAGACACCGGAAGATTCACAATGAAGCTTATTTGAGCTGGA
Long Flanking Sequence:
AGGGAATGAGAGTACATTTTGACTGCAAAGCAGATGGCTATCCATCACCGTCTATAACCTGGCTGTCAGCCCAACAGTCTGCACTTAGCTCTGCCGGGAGAGTACGAGTGCTTACTAATGGGAGTTTACAGATCAGTTATGCGCAAGTACAAGACAGTGGAACATATTTATGTAGCGCAGCTAATGCTGCAGGTAATGACAGCATCTCTGTGAGTCTGCATGTGGAGGGGCTTCCACAAAACCGCACAGTGTCATATTTCTCAGACGAGGGATGGATAGAAACTTCAGCACCTCCATCTACCAACTCCTCAGCTCGGGTGTCAAGTCCTTACCCGTTTGATGCTAAAACCCTCATCATTGCTACCACCATGGGATTTCTGTCTTTTCTCAGCTCTGTTGCAATCTGTTTTGTGTTTATGTTCTTCTGGAGTCAGAGCAAAGGTCAGATAAAACACACTGCCACAATAGACTTTGTGCCACGATCATCTATGGGTGGAGGT[G/T]GAGATGGTGGAGACACCGGAAGATTCACAATGAAGCTTATTTGAGCTGGAATGGAGAATCCATGGTTTTTCTTACACATAGTTGAGCCTTTAAAACGGTTGTACACTCTTAAAGTTTTTTTTTACAGTGATGCCATAGAAGAATCATTTAGGGTTCCATAAAGGACTTTCAGTGAATTGTTCTTCACACAAAGAACAAAATGTTCTTTTAAGAACTATGTAATAATATAAAGCACTGTTTTTTGTAACTGAAAAGAATATTTTGAGGAATGGAAAGGTTTTATGGATGTCAATGCCGAAAAAGAACCTTTATTTTTGAAGGTTTACTGTAACTCTCAAAGTGCAGAAGAAACTTATCCATCACTCATTATTAATAGTTAAAAACTATGATTTCTTAGTGATGCTATTGTAGAACTATTTTTGTTCCCCAAATAACCTATCAGTGTATGGTTCTTAAAAGAACTCATTTTTAAATGTAGAATCTAAAATGAATCTTATGGA
Associated Phenotype:
Not determined