ZMP
rttn
Ensembl ID:
ZFIN ID:
Human Orthologue:
RTTN
Human Description:
rotatin [Source:HGNC Symbol;Acc:18654]
Mouse Orthologue:
Rttn
Mouse Description:
rotatin Gene [Source:MGI Symbol;Acc:MGI:2179288]
Alleles
There are 12 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa32481 | Nonsense | Available for shipment | Available now |
| sa801 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa32481
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006930 | Nonsense | 264 | 2234 | 7 | 49 |
| ENSDART00000142473 | None | None | 318 | None | 9 |
Genomic Location (Zv9):
Chromosome 24 (position 15155351)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 24 | 15106799 |
| GRCz11 | 24 | 15251218 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGCATTGGCCTGTCTGCAACAGCTTTGCAGGAACTTGAAGAGCCGCCTA[C/T]GATTTTACAGAGATCCAAGCTTCTTCTCAGCCAAACAAGGTACCCCACAA
Long Flanking Sequence:
TATTTATCAGGCTGGGATAAAGTGGTTTGGAAGCGCTCTCTTCAGCTAATGCTCTTGAACTTTTGTGTAATTGTTTAAAAATTGAATGTGCCAGCGATTCCGACTCGGAGTGATCAGTTCAATTAGGTTTATTGAATCACTTTCATTCATTTGCATTGCTTTGGTACCACTGGAGGGGTAGTGCGTTTTAAATTGGTACAAATTACACAACTTAAAAGTCAGTATCAGGTGGCCTTTTATTTAGTGTCTAATTGAATGCAGAATCAGCTCTCCTGAAAGGCTTGCACCATTTAGATCAGTTGTTTTTGTTATAACAGGTCTGCACTTGTCCTCGTGGGTTTACAAGACAACATCAGCTTCTGTTTTCATGTATTGCTGTTTTCCCCCTCTAGAGTCTGCTGTCACTTCTCGGTCTGAATGTTGATGGTGATGTCAGCTACCTGACGTTCCAGGCATTGGCCTGTCTGCAACAGCTTTGCAGGAACTTGAAGAGCCGCCTA[C/T]GATTTTACAGAGATCCAAGCTTCTTCTCAGCCAAACAAGGTACCCCACAACATCTATTATGAATATGTAAACTTTTCCTAATGTGGGGGTTCGCTCCTAGCAGTTGAACTTTTTTATTCGAATTTTGCAGCACTCAAAAACTCAGATGCTCCATTTATACTTGGTATTAACTCTTTCCCAGTCATTGTTTTTTTTTTTTTTTTTTTTCAGTCACCAGCATTTTAAAGATTTTTACCTAAATTTGTTTATATATATATATATATATATATATATATATATATTAGGGATGGGAAGATTAACCGATATGTATCGATACGCGGTCATGCGCGTGCACGATGCGAGTGCATCGGTTGAGCAGCAGAGGATGAATGAAATTTTGGAAGCAAATCGAGATGCATCGGTTTTTGCGAGATGCATCGGTTTTTCCAAGATACAGCTTATATTTTTAATATAGAATGTATTTTTTATTTATTAACAAGTGTTGTCAACCTGTTTTGGCG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa801
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006930 | Nonsense | 1037 | 2234 | 24 | 49 |
| ENSDART00000142473 | None | None | 318 | None | 9 |
The following genes are also affected by this mutation:
Genomic Location (Zv9):
Chromosome 24 (position 15109137)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 24 | 15060585 |
| GRCz11 | 24 | 15205004 |
KASP Assay ID:
554-0706.1 (used for ordering genotyping assays)
KASP Sequence:
TGCAGATCACCTGGAACACAGCATGGCATTCTGGGATTGATGGATTGCTA[G/T]AGCACCTGAGGGGTTTTAGAAGTGATGTGCCAGAGTAAGTTGGATTCATC
Long Flanking Sequence:
ACACTAATGTCAAATCCACCAGAGTTACAGACCACTCCTTTCTTTCTTTCATTTTATTAATGGTAAACATGCTATCAGCAAGAACGCTTCGGCTCACGTTCATTTCATTATCTTTGTTCTCTCATCAGGACTGACGAAGCTGGCTCAGACACAGGCCTGTCTTCCTTCTCACTTCCTGCAGCCATTATACGGAGGTAAATTACATCCCTTTACAAGTGCATTAACGGCCATTTAATTTCTCCATAACCTGGCTTTCAGAGTTGTCATTGGTCATTAAAGCAAGGGTTTAACTATTATTTGACAGATTGATTGCAGAACTGTTATATCTGATCTTTTTTCACAGGTACAATTTGCCGTTTCAAGCTCCTTCACATCATGCAGTGAGTCCATACTGTTCAGTTCTTCCTCCATACTCAGATCTCCTGAGTCTGAAGCCCGCCTGGGAAGCTCTGCAGATCACCTGGAACACAGCATGGCATTCTGGGATTGATGGATTGCTA[G/T]AGCACCTGAGGGGTTTTAGAAGTGATGTGCCAGAGTAAGTTGGATTCATCCGTTTAGATGTTTGTAAAAGTTCATGTTGGAGAGGACTTTCAGGAAATTTAATTTAATTTGATTTGATGTGATTTGATTTGATTTGATTTGATTTGATTTGATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTGTTACATTTGGTTACATTCAGTTAAAGTCAGTTACATTCAGTTATATTCAATTATGTCCCGTTTCATCCAATTACATCCACTTACATTCAATTACACCCAATTACAGCCATATACATTTAGTTACATTCAAATACATTACATTCATGTACATTGTCACACCCAATTACATCCAGTTACATCCAATTAAAGCCACTCACATCCAGTTACATTCAATTACATTACATTTAGTTACATTCAATTACATCGTATTGACTTGCATT
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |