Busch Lab

ZMP

LOC797812

Ensembl ID:
ENSDARG00000060459
Human Orthologue:
LRFN2
Human Description:
leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:21226]
Mouse Orthologue:
Lrfn2
Mouse Description:
leucine rich repeat and fibronectin type III domain containing 2 Gene [Source:MGI Symbol;Acc:MGI:191

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa864 Nonsense Available for shipment Available now
sa42983 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa28909 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa864
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085218 Nonsense 251 780 1 2
Genomic Location (Zv9):
Chromosome 17 (position 40388751)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 40273367
GRCz11 17 40223023
KASP Assay ID:
554-0766.1 (used for ordering genotyping assays)
KASP Sequence:
TCTGTCTCTCAGCTTTGGTGGGAATCCTCTTCACTGTAATTGTGAGATTT[T/A]ATGGTTGCGACGCCTAGAGAGGGAGGATGATATGGAAACCTGTGCCTCCC
Long Flanking Sequence:
AAGAAACACCATCAGCTTCATTCAGCCATTCTCCTTTGTGGATCTTGAAACTCTGCGTTCGTTGCACCTGGATAGCAACCGTTTGACAGAGCTGGGTCCAGATGTCTTACGAGGCTTAGTAAACTTGCAACACCTCATCCTGAACAACAACCAGCTTACACATATCTCCAAAGAAACTTTCGATGACCTGCTGCTCACCTTGGAGGACCTAGACCTCTCCTACAACAACCTGCGGGGCATTCCCTGGGACGCCATACGCAAGATGCTCAACCTACACCAGCTGAGTCTTGACCACAATCTCATCAACCACATTGCTGAGGGCACTTTCACTGATCTTGAAAAGCTAGCAAGGCTGGATCTTACATCAAACCGTCTCCAGAAGCTTCCACCAGATCCTATTTTTGCTCGATCGCAGAGCAACATCGTTCTCAGTACACCATTTGCCCCTGTTCTGTCTCTCAGCTTTGGTGGGAATCCTCTTCACTGTAATTGTGAGATTT[T/A]ATGGTTGCGACGCCTAGAGAGGGAGGATGATATGGAAACCTGTGCCTCCCCTCCAAGCCTCAAAGGTCGTTACTTTTGGTATGTTCGAGAGGAAGAGTTTGTCTGTGAACCACCATTAATTACTCAACACACCCATAAGCTTTTGGTCCTGGAAGGACAGACGGCTAGTTTACGCTGCAAAGCTGTTGGTGACCCTATGCCTTTTATACACTGGATTGCACCAGATGACAGGCTAATAAGCAACTCATCCAGAGCTACTGTGTATGAAAATGGTACTTTAGACATTGCAATCACCACATCAAAGGATTATGGGACATTTACTTGCATTGCTGCAAATGCAGCAGGAGAATCAACAGCCTCAATTGAACTCTCCATCATCCAGCTTCCTCATCTCAGCAATGGAACTAACCGCACATCTCAGCCCAAGTCCAGACTATCTGACATCACCAGCTCCACTAAAACCAGTAAAGGCGAGACCAAAGCCCAGCCAGAGCAAGTCG
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa42983
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085218 Essential Splice Site 459 780 1 2
Genomic Location (Zv9):
Chromosome 17 (position 40388126)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 40272742
GRCz11 17 40222398
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGTACCAGCTGCAATACAACTGTTCGGAGGATGATGTCCTGATTTATAG[G/A]TAAATATTCTATGTTTCCTTTCCTTTAAACAACTGGAGACTGATTAGGCA
Long Flanking Sequence:
CAACACACCCATAAGCTTTTGGTCCTGGAAGGACAGACGGCTAGTTTACGCTGCAAAGCTGTTGGTGACCCTATGCCTTTTATACACTGGATTGCACCAGATGACAGGCTAATAAGCAACTCATCCAGAGCTACTGTGTATGAAAATGGTACTTTAGACATTGCAATCACCACATCAAAGGATTATGGGACATTTACTTGCATTGCTGCAAATGCAGCAGGAGAATCAACAGCCTCAATTGAACTCTCCATCATCCAGCTTCCTCATCTCAGCAATGGAACTAACCGCACATCTCAGCCCAAGTCCAGACTATCTGACATCACCAGCTCCACTAAAACCAGTAAAGGCGAGACCAAAGCCCAGCCAGAGCAAGTCGTTTCAGTGTCAGAGGTCACTGGAGTCTCTGCTCTAATCAAGTGGATGGTTAGCAAAGTATCGCCCAAAGTAAAAATGTACCAGCTGCAATACAACTGTTCGGAGGATGATGTCCTGATTTATAG[G/A]TAAATATTCTATGTTTCCTTTCCTTTAAACAACTGGAGACTGATTAGGCACATACTTTAGGCACAAGTTCTTTTAGTTTCTCATTGAATATATGTTGGAATTAGACAAATAGATTGTATCTCAATTTAAAAAATGGCCGTAAAAATTCTGGTTAACTGGTTAAGAGTAAGTTTTCATAATATATACAATAAACAACTGTTAATGGACTTCTCCATAATTCCTCACTTTTTATGCTTTTTTTTTAATTGCTATGCTTTTTTTACTTATCGGTTATGTACATTAGAGTTTTATGTTACATCTAATTTCGATAAACAATTTTTATTGCATTACTTTAATTTTATGCAGCAAATATACTGGACTTTAACTCCATGTAGGAGTTGTTGACGGGGCCCCCCGCTACACCACTGATTGTATATTTGTTACCATGATGTTTTTTTACTAGTTTTTTAATAGTAGAGTTTTTTTTCTAACAAGAATAGGTATTATTGGCAACCACTTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa28909
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085218 Nonsense 625 780 2 2
Genomic Location (Zv9):
Chromosome 17 (position 40382021)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 40266637
GRCz11 17 40216293
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGAGTAGCATCTCTTCCTCTTCATCCTCCTCAGCAGACACACTTGGATG[T/A]GAGAAAGTAGAGTCCTACAACCGGCATGGCGATTCAAACACCTTGCCTCA
Long Flanking Sequence:
AGAATGATTCCGGCAATCAGCAGATCCTTTTTGGTCAACAACCTGATGCCAGGGATGCAGTATGATCTATGTGTGTTAGCCATCTGGGAAGACACTGCCACCACACTTACTGCAACCAACATAGTGGGCTGTGTGCAATTCGAGACACGTGATGAGTTTCCTCGCTGCCAGTCACTTCACAGTCAGTTTCTAGGAGGAACCATGATCTTAGTGATTGGTGGAGTGATTGTGGCCACTTTGTTGGTTTTTATTGTCATCCTTATGGTTCGCTACAAAGTGAACAGCGGTTTGCAAGTTGCAAAGTTAGTGACTGTGAGCAACACCTACTCCCAGACCAATGGGAGACCACAAGCTCCGCAACGTCTAAACAATGGTGCTCCTACACCACAGACACCAAAAACTGTAGTGGTGATGCGAGATGAAGTGGTGGAGTTTAAGTGTGGCTCCTTGCAGAGTAGCATCTCTTCCTCTTCATCCTCCTCAGCAGACACACTTGGATG[T/A]GAGAAAGTAGAGTCCTACAACCGGCATGGCGATTCAAACACCTTGCCTCATAGGTGGAAGCAGTCGTCAGCCAAAGCGCGGCCAAACTTGGATAACCTTCTTGGGGCATTTGCCTCTCTGGATTTGAGAGCTCCCACAAGAGATCCAGGAGGACCATCTTCCTCTGGGACCATGGCAATGGCCATGAGACCCCCCACTGACAAGGAGCCTCTGCTAGGCCGAGGAGATTCTAAGCTTGGAAAGCTTGTGATGCTGCCATCAGAGAACAAGCCCAAGCGCAGCCACTCATTCGACATGGGGGACTTTGGTGCTTCACAGTGCCTTAGCTACCCACGGCGCATCAGTAACATTTGGACTAAGAGGAGTCTCTCAGTTAATGGCATGCTCCTGCAGTGTGACGAGAGTGAGGGGGAAGGCGATAAAGCGACATTTGATAGCTCTGAGTGGGTCATGGAGAGTACAGTCTGACAGGGACATTGGATTAGCTCTGCCAAAAGAGA
Associated Phenotype:
Not determined