ZMP

LOC556271

Ensembl ID:

ENSDARG00000089567

Human Orthologue:

PATL2

Human Description:

protein associated with topoisomerase II homolog 2 (yeast) [Source:HGNC Symbol;Acc:33630]

Mouse Orthologue:

Patl2

Mouse Description:

protein associated with topoisomerase II homolog 2 (yeast) Gene [Source:MGI Symbol;Acc:MGI:1914828]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa8546	Splice Site, Nonsense	Mutation detected in F1 DNA	Not yet available
sa5851	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa8546

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Splice Site, Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000124799	Splice Site, Nonsense	347	714	9	19

Genomic Location (Zv9):

Chromosome 12 (position 14203786)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	13059439
GRCz11	12	13097742

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TCCACCCCCAGCATAAGCGGCTTTTGAGTCAGCGACAGCCAAGACCACAT[A/T]AGTGAGAAGTGAGAAATGTATTTACTNNTAAAGTATGTTTGCCCCTTTTT

Long Flanking Sequence:

CTGCTTTAATACATTTATGCATTGGGCTTACTAGTATAGCCTGTATCATGGCTGCTTGGGCTTCAACACATAAAATGACATTGACATTTATGACCGCAGATTAGCGTCACACAAAAGAAGGTTAGGAAAAATTAACTTCTGAAAAAATCCTATAAGAGTTGACATGCATATTAAACATGCATATTAGACAATGAAAGTGTTATTTGACCTTGCATAAATATCAACCTGCTGTTGCAGACATCAAAACCAAACTATGACCTTTTTATAATGAGTCATAGGATTCAAATATTATGGATTCAAATGTAAATGAATGAATTTGATACGTTAACAACTACTGTATTTTCATGTGAAGTCTTGACCTTGCATTGAGTAACTTGATCTTGCTACTATTTGGTCTGTTTCCATTAAATTTTCCTTGCCATTTTAGTGCGCCAGGTCCTGTTGTCCAGTTCCACCCCCAGCATAAGCGGCTTTTGAGTCAGCGACAGCCAAGACCACAT[A/T]AGTGAGAAGTGAGAAATGTATTTACTTATAAAGTATGTTTGCCCCTTTTTTAAAGCAGGTTATACAATTCACAGAAAGCCATTGAGCTGGGACCCTTATTCCCAAATCATGTCTGACAAGGAGAAGGAGTGGATAATCAGGCTGCAAATGATCCAGCTACAGAGTGAGAACCCACATTTGGATGACTACTATTACCAGGTTTGTTTCACTCTGGAACTTATTGGTCCTGCTGTTCAGGGATGGTGTTAGCTTTCTGTTTTCTCCTAATGCTGACTTTTTGGTTATTTTCTAATGTATGAACGGGTAGAAAAAAAAAAAAAAAAAAGAATTGCTATGCACTGTTGTTCACCTCTGCAGGAATACTATCAGAGAATGGAAACCAAACTGGCTGAAGAAGAGTATGTGGGTGACCGGACGAAGAAGGAACCACCTAAACTTACAACCCCTTATGTTAGCAAAAATGTCTCGTACATCCCAGGTCTGTCAAAATAAACAAATAT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa5851

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000124799	Nonsense	631	714	17	19

Genomic Location (Zv9):

Chromosome 12 (position 14208631)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	13064284
GRCz11	12	13102587

KASP Assay ID:

554-3892.1 (used for ordering genotyping assays)

KASP Sequence:

GCGTTTTTTAACAAAACCTTGTGTTTGCAGTTTGGTCTGTCGTTGCTGTA[T/A]GCTCTACTCTCACAGGGAGAAAGGCTTTTATCTTCTGATCTACCCATGGA

Long Flanking Sequence:

AGACTCCTTCCCTTCCTGTCACATGATTCAGCCCTGCATATTCTGAGCACAGTAACCAAACACCTTCCAGTTCTGATGAGCAGAGATACAGATGAGGTCTGGAAAGTGTTTATATAATTATTTTCTAAATCAGTGTAGCTCTTGAATATGCAATCAGCATCAAGTTCCAACCTCTTCACAGGCTCTTCCTATTCTGTATCCATCTCTCCGGGCTGTGATTAATGGACTTGTATTCAGTCAGCTAATCAGAATTCTCAAAGAGTTCACCGCATTACTGCCAGACTCGCAAGACACCCGGTTAACACTGGCCTGCCAAAACAAGGTCTGCTCTTGAGTTTTGAAAATAGACAATTGAAAACTTTAAATTATACAGTGTAGTTATGGCTTTGGTTTAATTTTCTCATCTTTCTTCAATGGCTATACATTTCTGTGGTGATGCTTTTTTTGAACGCGTTTTTTAACAAAACCTTGTGTTTGCAGTTTGGTCTGTCGTTGCTGTA[T/A]GCTCTACTCTCACAGGGAGAAAGGCTTTTATCTTCTGATCTACCCATGGAACCTAGTATTGGAGATTTTGAGACATGGTACTATTTGTTTGTCTGTGGAAGGTGCTTAGCAGAATGTTCAAATAGTAGATTTGAAAAATCTTTAGAAAACTAGTAATCCTCAGATGAATTTTATGTAACGCTTTCAATATTTTCCAAGTGTCTATAATTCAACTGTGGAAAAACAGACAGTTTAAGGCATCAGTAATTTAACGTAACTATTTCTATGCTAACCATCAAGGACGGACACGGTTTTCCATGTGGCCAGGCAGCTGTCCCAGACATCACTCGTTGAGCCACTGCTTTTGCCTTCCAACCTGCTAACACTCTTCTGTCGATATCTGGACAAGCGGACTGTGCACCAACTAAAAAACAACATGGAGTGAGTCAACATATTGCACTCAGCTTTTCTTACTTTTCTAAACCAGTCTGCTTGAAGAGAATTCACTGAAAAGATAAAAG

Associated Phenotype:

Not determined