ZMP
si:dkey-46g23.1
Ensembl ID:
ZFIN ID:
Human Orthologue:
TNRC6B
Human Description:
trinucleotide repeat containing 6B [Source:HGNC Symbol;Acc:29190]
Mouse Orthologue:
Tnrc6b
Mouse Description:
trinucleotide repeat containing 6b Gene [Source:MGI Symbol;Acc:MGI:2443730]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa8537 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa8537
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000108589 | None | None | 776 | None | 17 |
| ENSDART00000109428 | Nonsense | 15 | 808 | 1 | 17 |
| ENSDART00000132746 | None | None | 118 | None | 3 |
| ENSDART00000133089 | None | None | 153 | None | 4 |
| ENSDART00000140482 | None | None | 315 | None | 5 |
| ENSDART00000145824 | None | None | 251 | None | 5 |
Genomic Location (Zv9):
Chromosome 3 (position 3894323)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 3578873 |
| GRCz11 | 3 | 3361126 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GYCGGAAGATGGACATTGAYGACGGCACCTCTGCATGGGGGGATCCGTCM[C/T]GATACAGCAGCAAGAAYGTCAATCTGTGGGATAAGAACAGCTCGCAKCCC
Long Flanking Sequence:
GGGGGGAAGACCAAGAAGGTGCATCTAGGAGGGAAGGAACAGGTTGGAGCCAAGGTGGCGGAAAAGAGTGGACCCCAGTGCCTGAAGCTGGAGGCTGGAAGGAAGAGAAAGGCACGAATCAGAATGAAGGATTGTGGGGCAGCCCTGAAGATTCGGGACCGCGGAGTGGTGGCTGGGATTGTAAAACCCACCAGGGATGGGGCGAGAAACTTCTTCCATCACAGATACCAAACAAACAAGCAGCACTTAAAACCCAAAATCAACAACCGCAGCAGCAATCGCAAACCCAGCAGCAGATGCCGGGATATCCAAAAGTCGTACAGGACCGTGGTCGTACAGGAGAGAACGATGAGCAGAGTAAAGGCTCGGGGTGGAGCTGTGGGCCCATCCCTCAGATTGCTTCAGCTGGTGAGCCGAGCGGGTGGGATGAGCCCTCGCCTCAGTCCATCAGTCGGAAGATGGACATTGACGACGGCACCTCTGCATGGGGGGATCCGTCA[C/T]GATACAGCAGCAAGAACGTCAATCTGTGGGATAAGAACAGCTCGCAGCCCCAACAGCAGTCCTCTGGAAGACCGGCTGGAACTCCATCTAAAAACTCTGGTAAGTGTGCAGAAGGGGTGTTGTAAAAATACCCAGAGTGACTAAAAGCAGTGTTTTTCAACCACCATGTTCCTGGAGGACCACCAGCTCTGCACATTTACCATGTCTCCTTAACCAAACACCGGTCGAGGCAGTGGCGCAGTAGGTAGTGCTGTCGCCTCACAGCAAGAAGGTCGCTGGTTTGAACCTCGGCTCAGCTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCTGCCTTCGTGAGGGTTTCCTCCGGGTGCTTCGGTTTCCCCCACAGTCCAAAGACATGCGGTACAGGTGAATTGGGTAGGCTAAATTGTCCGTAGTGTATGAGTGTGTGTGGATGTTTCCCAGAGATGGGTTGCGGATGGAAGGGCATCCGCTGCATAAAAAACTTGCTGG
Associated Phenotype:
Not determined