Busch Lab

ZMP

synj1

Ensembl ID:
ENSDARG00000025011
ZFIN ID:
ZDB-GENE-030131-9180
Description:
synaptojanin-1 [Source:RefSeq peptide;Acc:NP_001007031]
Human Orthologue:
SYNJ1
Human Description:
synaptojanin 1 [Source:HGNC Symbol;Acc:11503]
Mouse Orthologue:
Synj1
Mouse Description:
synaptojanin 1 Gene [Source:MGI Symbol;Acc:MGI:1354961]

Alleles

There are 9 alleles of this gene:

Allele Name Consequence Status Availability
sa21748 Nonsense Available for shipment Available now
sa12222 Nonsense Available for shipment Available now
sa21749 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa21748
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000039444 Nonsense 18 1308 2 30
ENSDART00000042829 Nonsense 18 1558 1 31
ENSDART00000134276 Nonsense 18 1554 2 29

The following transcripts of ENSDARG00000025011 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 10 (position 27151713)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 26555570
GRCz11 10 26517283
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCATTCAGTAAAGGTTATCGTATTTATCACAAGCTGGATCCACCTCCATA[C/A]AGTGTGATTGTGGAGACCAGAAATCGAGAAGAATGTCTGATGTTCGAGTC
Long Flanking Sequence:
CTGCATATCTAGATTAAGGTACAATTAGTTTTATAATCGCACATTTGTCCATTTTTGAACAGTGATAACTTATGACAGGGTCTCTATATTGTATACCATGGTACTTAGAAAATTCGGTATGATATCGCATGTAATATGACTTCAAAACAACTTTAGCATTATTTATGTGAACAATGTTGTACCTTGATAAGCACTTGCTGTTATATCTCTTATATAATATCACTATTTTGAATTTGCTAAGACTTATTTTCTGAAATTATATTATAAAGCAGAAACTCTGAATGTGCGAATATAAGACCAACTTTACCTCAGTCATATCTGAAATTGCCGGTGGTTTGAGGGTTGGAATATTGTCTCCACAACCCTTGTGTCATTTGCTTTATATGGTGTGTTTCCATTTAAATTATTTATTTTTGCATTCAGGACTGAAACAGGTTGTGTCGAGCCATGGCATTCAGTAAAGGTTATCGTATTTATCACAAGCTGGATCCACCTCCATA[C/A]AGTGTGATTGTGGAGACCAGAAATCGAGAAGAATGTCTGATGTTCGAGTCTGGAGCTGTTGCTGTACTGTGTAAGACTGTCCACACCCTGAGTTACTGAATTAAACTATTAAATGTTTAGTTAGCATTGATTCTCTGTCTTTCTTAGGTGTAAGAATCAAAACAAAATGACACATTTAAGTATTTATTTCATCTTAATAGTATGTAGTATTATGGCATGTAGATTTTAAGTAAATATTTTGATGTCATCCACAGCGGCGGCAGAGAAAGAGACCATAAAAGCATCGTACACCAAGATGCTGGATGCCTATGGGATCCTGGGAGTTCTGCGTCTGAACCTTGGTACAGTTTCTCAGCCTCTGTTTTTATTTTGGCGGGTACTTGCTAATTCTGTTTGTTTTCATAACAAATCCAAATCCACCCTGTCGCCGGATTAAAAGAAAAATAGATAATTCTGAAGATAATCACCAAAACACTGAAATTCACACCAAAACAAACATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12222
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000039444 Nonsense 511 1308 13 30
ENSDART00000042829 Nonsense 515 1558 12 31
ENSDART00000134276 Nonsense 508 1554 13 29

The following transcripts of ENSDARG00000025011 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 10 (position 27172808)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 26576665
GRCz11 10 26538378
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCTCTCTCTCTCCCTTTCTTTTCTCTTCAATGCTTGCAACRTTAGTCTCT[G/T]AGCCAATTTTACAGTCAGGTATAGTATACACAAACCGACCATAAATCCAT
Long Flanking Sequence:
ATTGATAAATAATATCACGACAGCTGCTTTAACATGAAGTTATTATTGAGTTGCTTCTTGTTACAGCTATGGAATAGTTTGATAGCAAGCAGGAAATGTTCATGGGCCAATGACATCACCAGATTGAAATGGTCTATTGAGAGAGCGTAATGTAGTACTATGTCGTTATATATGAATATGTACAATGTATTAAAACGTTTAAAATTCGTAGCAAATGCGTTTTTCACTTCACTGTTTCAGGTAAAGTTTCTTTGGTTTCTGTGTTTGTGGTCACGGTTTATGGGATCAGTCTGCTGTAGTGGACTGATTTCAACATGTGGATATGGATTTGAATGAGTTTCCTAATGCTAGCGTGCTAATCTGCGGCTCCCGGCTGCTTTGGGTGTGAGATTAGCTCTGAACCAGAGGGCTAATGCTGTTATCTGTCTAACGGCTAACTGTTAACCTCTCTCTCTCTCTCTCCCTTTCTTTTCTCTTCAATGCTTGCAACGTTAGTCTCT[G/T]AGCCAATTTTACAGTCAGGTATAGTATACACAAACCGACCATAAATCCATAACTGTTTATGGTTCCCTGTTTCATAAAATCAGTGTTTATTTTGGCGCTGCTGACTCTGTGCTGTGTGTTTGTACTTCGTGTAGCCTTTTACTATGGTGTGTTGTCTTGTTTTTTATATTTCTATCCAACTTTTAAGGACAAAATTCTGTCTTTTTGTTGTCTCTCATAGTGGTTTGATTAATGTCATCAAGATCTAATATGTTCTAGATATTATCTTAGAGGATATGAAATTATCGATTGAGTTTACATGCACATTCTTAACCCGATAATGCTTCAAAAGCTGACAATACAGTAGTCATGTATTCATCTTAACCCATTTTCCTTTGTCGGAGTAAAGTAATAAGGTATAAACCGATAATCAAAGCTAGATTTTTGCCTGTCACAATGATTTTATGCAAGTTAATGCATTAACCAACTTTCATATATAATAAAGTGTGTCCTTTCTGTGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21749
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000039444 Nonsense 947 1308 22 30
ENSDART00000042829 Nonsense 952 1558 21 31
ENSDART00000134276 Nonsense 944 1554 22 29

The following transcripts of ENSDARG00000025011 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 10 (position 27185402)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 26589259
GRCz11 10 26550972
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTATTTCCTGCTGAACAGGTTTGTTGAAGAGAAAATGTGGGTGACATTTT[T/A]GGAGGGATACTCAGCTCTGGCCGCTCTGTCTTTGAGTGGGTCTACTGTAA
Long Flanking Sequence:
TTTATATAAAATATATTTTCCAAACAACAAAATTGTGGCTAGTGAAAATGGCAAGTGGCTAGTAATGTTGGAAATCTACTAGCCACAGTGGCTGATGATCAAAAAAGTTAATGTAAAGCCCTGTGTATATATAATTACGCTGTAATCTCTCGGCTGTGTATTTAAAACATGTCGGTCTCTTTGTTTTCATTCTGGCTTGTTGCGTGAACGAGTGACGTATCTCTGTAAACTAATAGCATTCAGCTGTACGTCTAGCTCTGCCTTGCCGAAAAAGTGGTACGGTACGTTCGGTTCGGTATGCCTTTTGACAGTGGAAATGGCCATAAAAGTGTACAAAACCGAACCGTACCACAGTTCAACCATGCCTAGTGAGAGTACACCCATACACATTCATTAAAAAAAATTCTTTAAAAATAAATGTAATAGTTTAATAATAATAAAATAATCTTTTTATTTCCTGCTGAACAGGTTTGTTGAAGAGAAAATGTGGGTGACATTTT[T/A]GGAGGGATACTCAGCTCTGGCCGCTCTGTCTTTGAGTGGGTCTACTGTAAGAGACATCCATACGATACATCTGACACATTTCCAAAAATCGCACTGTATCATAAAACTGACTTCTAATGTGCCTCTCAGGTGAATGGAAAGACCATAGACATCCGCCTGAGGAGTCCTGGATGGATAAAGAGTCTTGAGGAGGAAATGAGTGTGGAGAGAATCTGTGGTAGTATTCCAACATCCACCAGCTCCACCCTGCTGGCAGAAAACTCTGACCTAGGAGAAGAGTATGACATGGAAGGTATAGTATGGGCTCTGCAGTACTGAAATGCAAAATAAAGATGTATATGGAGTTACTTAGATTGCGGATATGTCTTTGACAGGTGATGTGGACGAGGAGGTTGAGGATATTTTACCCCAGCACCTGCAGCCTGGAGCAGGCATGGATCTGAGTGCGTCTCCTGCCACATCTCCACGCACCAGCCCATGCCCTTCACCCACTCACGGAG
Associated Phenotype:
Not determined