ZMP
synj1
Ensembl ID:
ZFIN ID:
Description:
synaptojanin-1 [Source:RefSeq peptide;Acc:NP_001007031]
Human Orthologue:
SYNJ1
Human Description:
synaptojanin 1 [Source:HGNC Symbol;Acc:11503]
Mouse Orthologue:
Synj1
Mouse Description:
synaptojanin 1 Gene [Source:MGI Symbol;Acc:MGI:1354961]
Alleles
There are 9 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa21748 | Nonsense | Available for shipment | Available now |
sa12222 | Nonsense | Available for shipment | Available now |
sa21749 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa21748
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000039444 | Nonsense | 18 | 1308 | 2 | 30 |
ENSDART00000042829 | Nonsense | 18 | 1558 | 1 | 31 |
ENSDART00000134276 | Nonsense | 18 | 1554 | 2 | 29 |
The following transcripts of ENSDARG00000025011 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 10 (position 27151713)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 10 | 26555570 |
GRCz11 | 10 | 26517283 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCATTCAGTAAAGGTTATCGTATTTATCACAAGCTGGATCCACCTCCATA[C/A]AGTGTGATTGTGGAGACCAGAAATCGAGAAGAATGTCTGATGTTCGAGTC
Long Flanking Sequence:
CTGCATATCTAGATTAAGGTACAATTAGTTTTATAATCGCACATTTGTCCATTTTTGAACAGTGATAACTTATGACAGGGTCTCTATATTGTATACCATGGTACTTAGAAAATTCGGTATGATATCGCATGTAATATGACTTCAAAACAACTTTAGCATTATTTATGTGAACAATGTTGTACCTTGATAAGCACTTGCTGTTATATCTCTTATATAATATCACTATTTTGAATTTGCTAAGACTTATTTTCTGAAATTATATTATAAAGCAGAAACTCTGAATGTGCGAATATAAGACCAACTTTACCTCAGTCATATCTGAAATTGCCGGTGGTTTGAGGGTTGGAATATTGTCTCCACAACCCTTGTGTCATTTGCTTTATATGGTGTGTTTCCATTTAAATTATTTATTTTTGCATTCAGGACTGAAACAGGTTGTGTCGAGCCATGGCATTCAGTAAAGGTTATCGTATTTATCACAAGCTGGATCCACCTCCATA[C/A]AGTGTGATTGTGGAGACCAGAAATCGAGAAGAATGTCTGATGTTCGAGTCTGGAGCTGTTGCTGTACTGTGTAAGACTGTCCACACCCTGAGTTACTGAATTAAACTATTAAATGTTTAGTTAGCATTGATTCTCTGTCTTTCTTAGGTGTAAGAATCAAAACAAAATGACACATTTAAGTATTTATTTCATCTTAATAGTATGTAGTATTATGGCATGTAGATTTTAAGTAAATATTTTGATGTCATCCACAGCGGCGGCAGAGAAAGAGACCATAAAAGCATCGTACACCAAGATGCTGGATGCCTATGGGATCCTGGGAGTTCTGCGTCTGAACCTTGGTACAGTTTCTCAGCCTCTGTTTTTATTTTGGCGGGTACTTGCTAATTCTGTTTGTTTTCATAACAAATCCAAATCCACCCTGTCGCCGGATTAAAAGAAAAATAGATAATTCTGAAGATAATCACCAAAACACTGAAATTCACACCAAAACAAACATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12222
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000039444 | Nonsense | 511 | 1308 | 13 | 30 |
ENSDART00000042829 | Nonsense | 515 | 1558 | 12 | 31 |
ENSDART00000134276 | Nonsense | 508 | 1554 | 13 | 29 |
The following transcripts of ENSDARG00000025011 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 10 (position 27172808)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 10 | 26576665 |
GRCz11 | 10 | 26538378 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCTCTCTCTCTCCCTTTCTTTTCTCTTCAATGCTTGCAACRTTAGTCTCT[G/T]AGCCAATTTTACAGTCAGGTATAGTATACACAAACCGACCATAAATCCAT
Long Flanking Sequence:
ATTGATAAATAATATCACGACAGCTGCTTTAACATGAAGTTATTATTGAGTTGCTTCTTGTTACAGCTATGGAATAGTTTGATAGCAAGCAGGAAATGTTCATGGGCCAATGACATCACCAGATTGAAATGGTCTATTGAGAGAGCGTAATGTAGTACTATGTCGTTATATATGAATATGTACAATGTATTAAAACGTTTAAAATTCGTAGCAAATGCGTTTTTCACTTCACTGTTTCAGGTAAAGTTTCTTTGGTTTCTGTGTTTGTGGTCACGGTTTATGGGATCAGTCTGCTGTAGTGGACTGATTTCAACATGTGGATATGGATTTGAATGAGTTTCCTAATGCTAGCGTGCTAATCTGCGGCTCCCGGCTGCTTTGGGTGTGAGATTAGCTCTGAACCAGAGGGCTAATGCTGTTATCTGTCTAACGGCTAACTGTTAACCTCTCTCTCTCTCTCTCCCTTTCTTTTCTCTTCAATGCTTGCAACGTTAGTCTCT[G/T]AGCCAATTTTACAGTCAGGTATAGTATACACAAACCGACCATAAATCCATAACTGTTTATGGTTCCCTGTTTCATAAAATCAGTGTTTATTTTGGCGCTGCTGACTCTGTGCTGTGTGTTTGTACTTCGTGTAGCCTTTTACTATGGTGTGTTGTCTTGTTTTTTATATTTCTATCCAACTTTTAAGGACAAAATTCTGTCTTTTTGTTGTCTCTCATAGTGGTTTGATTAATGTCATCAAGATCTAATATGTTCTAGATATTATCTTAGAGGATATGAAATTATCGATTGAGTTTACATGCACATTCTTAACCCGATAATGCTTCAAAAGCTGACAATACAGTAGTCATGTATTCATCTTAACCCATTTTCCTTTGTCGGAGTAAAGTAATAAGGTATAAACCGATAATCAAAGCTAGATTTTTGCCTGTCACAATGATTTTATGCAAGTTAATGCATTAACCAACTTTCATATATAATAAAGTGTGTCCTTTCTGTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21749
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000039444 | Nonsense | 947 | 1308 | 22 | 30 |
ENSDART00000042829 | Nonsense | 952 | 1558 | 21 | 31 |
ENSDART00000134276 | Nonsense | 944 | 1554 | 22 | 29 |
The following transcripts of ENSDARG00000025011 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 10 (position 27185402)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 10 | 26589259 |
GRCz11 | 10 | 26550972 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTATTTCCTGCTGAACAGGTTTGTTGAAGAGAAAATGTGGGTGACATTTT[T/A]GGAGGGATACTCAGCTCTGGCCGCTCTGTCTTTGAGTGGGTCTACTGTAA
Long Flanking Sequence:
TTTATATAAAATATATTTTCCAAACAACAAAATTGTGGCTAGTGAAAATGGCAAGTGGCTAGTAATGTTGGAAATCTACTAGCCACAGTGGCTGATGATCAAAAAAGTTAATGTAAAGCCCTGTGTATATATAATTACGCTGTAATCTCTCGGCTGTGTATTTAAAACATGTCGGTCTCTTTGTTTTCATTCTGGCTTGTTGCGTGAACGAGTGACGTATCTCTGTAAACTAATAGCATTCAGCTGTACGTCTAGCTCTGCCTTGCCGAAAAAGTGGTACGGTACGTTCGGTTCGGTATGCCTTTTGACAGTGGAAATGGCCATAAAAGTGTACAAAACCGAACCGTACCACAGTTCAACCATGCCTAGTGAGAGTACACCCATACACATTCATTAAAAAAAATTCTTTAAAAATAAATGTAATAGTTTAATAATAATAAAATAATCTTTTTATTTCCTGCTGAACAGGTTTGTTGAAGAGAAAATGTGGGTGACATTTT[T/A]GGAGGGATACTCAGCTCTGGCCGCTCTGTCTTTGAGTGGGTCTACTGTAAGAGACATCCATACGATACATCTGACACATTTCCAAAAATCGCACTGTATCATAAAACTGACTTCTAATGTGCCTCTCAGGTGAATGGAAAGACCATAGACATCCGCCTGAGGAGTCCTGGATGGATAAAGAGTCTTGAGGAGGAAATGAGTGTGGAGAGAATCTGTGGTAGTATTCCAACATCCACCAGCTCCACCCTGCTGGCAGAAAACTCTGACCTAGGAGAAGAGTATGACATGGAAGGTATAGTATGGGCTCTGCAGTACTGAAATGCAAAATAAAGATGTATATGGAGTTACTTAGATTGCGGATATGTCTTTGACAGGTGATGTGGACGAGGAGGTTGAGGATATTTTACCCCAGCACCTGCAGCCTGGAGCAGGCATGGATCTGAGTGCGTCTCCTGCCACATCTCCACGCACCAGCCCATGCCCTTCACCCACTCACGGAG
Associated Phenotype:
Not determined