Busch Lab

ZMP

thsd7a

Ensembl ID:
ENSDARG00000061479
ZFIN ID:
ZDB-GENE-060503-709
Description:
thrombospondin type-1 domain-containing protein 7A [Source:RefSeq peptide;Acc:NP_001116232]
Human Orthologue:
THSD7A
Human Description:
thrombospondin, type I, domain containing 7A [Source:HGNC Symbol;Acc:22207]
Mouse Orthologue:
Thsd7a
Mouse Description:
thrombospondin, type I, domain containing 7A Gene [Source:MGI Symbol;Acc:MGI:2685683]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa15977 Nonsense Available for shipment Available now
sa8458 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa19218 Nonsense Mutation detected in F1 DNA Not yet available
sa36889 Nonsense Mutation detected in F1 DNA Not yet available
sa39256 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa15977
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000087694 Nonsense 17 1634 1 26
ENSDART00000123812 Nonsense 67 293 2 2
ENSDART00000126447 Nonsense 17 1589 1 31
Genomic Location (Zv9):
Chromosome 19 (position 39250394)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 38114377
GRCz11 19 37701497
KASP Assay ID:
2261-3577.1 (used for ordering genotyping assays)
KASP Sequence:
TAGGACCATGGGGAAGGTGTATGGGTAGTGAGTGTGGTCCGGGAGGAAGT[C/T]AAAGCCGAGCAGTATGGTGTGCCCACTCTGAAGGCTGGACAACRTTACAC
Long Flanking Sequence:
CATTTGTACATAACCTTATTAATATTCATGAGCTACATTTATTTCAAAACCCAGCATGCATGTGAAGCGCTACTTTGTAAGACAATGTGCCAGCTTTTATTCTTTCATCTCCTGCACTCTCTGACCCTCTACTCAAAGATGTCTCCAACACGCTGTGAAATCCATCAGTAAAATCAGCTTGTCTTCACCACTGCAGCTCCCTAGAGTGCTTTGAATTATAGAGTCCCTGGGAATACTGGCATATATTGATTCAGGCGATGGGCATTTGACTCCTCCAGCACATGTCCCGTTCTTAACTCCGTTTAATGTCTTAAGTGCATGACGTTATGACCTGCGCAGGAAGTGAAAGAGGATGCAATCAGGATATTGAACATGCGTGCAAACCAACACTGCTGACTCAATCGCTCGATTGACTTCATTATAAATGTGTTTCTGTTTGTCTTTGTCATTTAGGACCATGGGGAAGGTGTATGGGTAGTGAGTGTGGTCCGGGAGGAAGT[C/T]AAAGCCGAGCAGTATGGTGTGCCCACTCTGAAGGCTGGACAACGTTACACACCAACTGCCAACAGTCGGAGCGGCCCAGCAACCAACAGAGCTGCTTCCGGGTGTGTGATTGGCACAAAGAGCTGTATGACTGGCAACTAGGGGCCTGGAACCAATGTGTCCCGGTGTCCATGCGCAATGCTGGCGTGCCAAGGCCAGCGGTGTGCACTCGGGGCGAAGAGGGCATCCAGACGCGGGAAGTGGGCTGTGTGCACAAGTCGGACGGCGTCCCGGCGGAAGATGCCATCTGTGAGTACTTTGAGCCCAAGCCACGTTTAGAGCAGGCCTGCCTTATCCCGTGTCCACGTGACTGTGTTGTGTCCGAGTTTTCTCCATGGACGTCCTGTTCTAAGAGTTGTGGGATGGGGCTCCAGAACCGCTTGCGTTCGGTTCTTGCTCCTCCACTTTTCGGGGGTTCGGCTTGCCCTAATCTTACGGAGTTTCGCACTTGCCAGCCGGGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa8458
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000087694 Essential Splice Site 459 1634 3 26
ENSDART00000123812 None None 293 None 2
ENSDART00000126447 None None 1589 None 31
Genomic Location (Zv9):
Chromosome 19 (position 39269190)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 38133173
GRCz11 19 37720293
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCCCCAAGYGAAACCTCATCCAACCTCGGCTCCCTCAAGAGCAAAGACG[G/A]TAACAAAACTGGCACATTCATTGTCTTAAMCTTCTGCTTGATTGCAAGYC
Long Flanking Sequence:
AATAGTTGTTCTGTAATGTTGCAATCCATAGCTCATCTTTGATGCCGTTTCCCTTGTGTTCTTTTGCCAACATGATGAATCAAAGAAGAGCAGCCTGGCCTTCAAACCCAATGAAGCTCAATAAAGCCATGACCTCGGTGCACATCGTGACTGGCATGGCTTCTTATTGGTCTATTTAAAATCGTCTGTATTTATAACTCAAAGGACAGTTTATTTTTGTTCAAAAAAACACAAGCTCAGCTTTTCAATCTCTAGGCTTCAGAGGATGAATAAAGGGAACATTAAATACTCATCAGCAGATCTTCGTCTTTTCCGCAGGTATAATTGGAGAAGCACAGAGTGGAGCGACTGCAGGGTGGATGTGCTCCTCAGCCAACAGGACCGCCGCAGGAGCAATCAGACCGGGCTCTGTGGAGGAGGAGTTCAGACAAGAGAGGTCTACTGTGTTCAGGCCCCAAGTGAAACCTCATCCAACCTCGGCTCCCTCAAGAGCAAAGACG[G/A]TAACAAAACTGGCACATTCATTGTCTTAAACTTCTGCTTGATTGCAAGTCATGGGAATAATGCACATGCTGGTTCCTTGATCATTTTCTGTCACACTCCCACCTACTGTTTGAAAAAAGACTTGAAGTTCTACCCTTTCTCTTTAGGAAATCTAAATAAAATCTAGTTAGTTAAACACCAGATGAGAAAACATAAGGATTTGGGCACTTTTCTGTTAATAGTCAAAATTGATCATCTACAGGCAGTCTGTTTTCTGTCTAGTTTTGACTTCCCTCATCAGAACACAGCATTTGAACTGTCATGTAGGATTGTAGTTTCTGAAGTAGACACCCACTGGTGGGACTGACTAATTGTTTTGAATATTTCAAAGAGAAAGCTGATGTAAACTGCTGCATAGTGTATGTTTTACTGCCAATCTTACATTAAAGGACACTGTTAAATATATTTAGTACATAGCAGAGAATTTGTTATAACAGTACATCAATGTATTTTATACTATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19218
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000087694 None None 1634 None 26
ENSDART00000123812 None None 293 None 2
ENSDART00000126447 Nonsense 725 1589 13 31
Genomic Location (Zv9):
Chromosome 19 (position 39328797)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 38192780
GRCz11 19 37779900
KASP Assay ID:
2261-3579.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAATTATTAGATTCACATATTTATGGATGCTTTCACAGGATGGAGATTT[T/A]GAAAGTATGAATCACTGAACCAAGTTTATAAAAAAATCTAAAAAACAAAG
Long Flanking Sequence:
TTGTGGCAGACTGTCAACTGTCTTTGCTCTGCTCAGTATGACAGGTTGATGGCCACTTACGTGCTGAATCTCAGAAATTATAAATATTTAAAATAGATCCTTATAAATAAACTACATAGTTGCAATCTAAACAACTACATTCTCGCCTAAAAAAGCCTTAAAATTTTATTATGTTGTCTAACAGCTTAAATATTTGTCTAATTGTATAGTCCCTCTTTAGTCCTAGTGTGGGCGGAGTAATACACGAGAGTGAAGAGGCTTTACAGGTGCTGATATTACTTTAATATCTCACGGCCAATGTCAGCCAATTATATATTAATAACAACCAATCATATTTAGGATCCAGACAGATTTATTGTATAAACAGAGATATAGATTATTGTCATGGCGTTTTTTTTTTTTTTTTTTGTATTTTACAGAATACAAATGCTATAAATGCTATAAAATGAATGAATTATTAGATTCACATATTTATGGATGCTTTCACAGGATGGAGATTT[T/A]GAAAGTATGAATCACTGAACCAAGTTTATAAAAAAATCTAAAAAACAAAGCTCATCATTATCATTTCAGTTCTCCATTGCATCTAATATTGAAGTCATTAAACCACAGAGCAGATGGGTGTTGAGATGTGCTACCATTTTCAGATTGATAAAACCTAAGGTTGGCTGAAAACCTTGTTAAATTCAGCTCGGCTATACAGAGACTAATGTAGCGATTATTTTTTTGCAAGGTTCCCTATATTTATTCATGACAGTTTCATATTTTGTCTCCATCCTCTTGTGTATATCCAGGTGGTTCTGTGAAAAAAAAGCAATCAAGGAAACGCATTATCATTCAGCTTCCGGCAAACGGTGGCCAAGACTGTCCAGAAGTGCTCTTCCAGGAGAAGGACTGTGATGCTTCATCTGTTTGTCCAGGCTACAGGTAATTCAAATATAGACACTTCTTTAAACAAGTTGCTAAATAAAGATGCAATATATGCATCAAATGTAAATGTTGTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36889
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000087694 Nonsense 792 1634 9 26
ENSDART00000123812 None None 293 None 2
ENSDART00000126447 Nonsense 744 1589 14 31
Genomic Location (Zv9):
Chromosome 19 (position 39329161)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 38193144
GRCz11 19 37780264
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAAGGAAACGCATTATCATTCAGCTTCCGGCAAACGGTGGCCAAGACTG[T/A]CCAGAAGTGCTCTTCCAGGAGAAGGACTGTGATGCTTCATCTGTTTGTCC
Long Flanking Sequence:
CAGAGATATAGATTATTGTCATGGCGTTTTTTTTTTTTTTTTTTGTATTTTACAGAATACAAATGCTATAAATGCTATAAAATGAATGAATTATTAGATTCACATATTTATGGATGCTTTCACAGGATGGAGATTTTGAAAGTATGAATCACTGAACCAAGTTTATAAAAAAATCTAAAAAACAAAGCTCATCATTATCATTTCAGTTCTCCATTGCATCTAATATTGAAGTCATTAAACCACAGAGCAGATGGGTGTTGAGATGTGCTACCATTTTCAGATTGATAAAACCTAAGGTTGGCTGAAAACCTTGTTAAATTCAGCTCGGCTATACAGAGACTAATGTAGCGATTATTTTTTTGCAAGGTTCCCTATATTTATTCATGACAGTTTCATATTTTGTCTCCATCCTCTTGTGTATATCCAGGTGGTTCTGTGAAAAAAAAGCAATCAAGGAAACGCATTATCATTCAGCTTCCGGCAAACGGTGGCCAAGACTG[T/A]CCAGAAGTGCTCTTCCAGGAGAAGGACTGTGATGCTTCATCTGTTTGTCCAGGCTACAGGTAATTCAAATATAGACACTTCTTTAAACAAGTTGCTAAATAAAGATGCAATATATGCATCAAATGTAAATGTTGTGTGAAGGGATGTCGTTTTTAAGTTTTATAAATATATTATACGTCATTATATATTAATTTTTTTTATTTTAGTAAAGCATGTGTATTGAAGAATGTTGTATACATACAATATACAGTCAACCTGAAATTATTCATACACCTGGAAAATTTGAGCAAGTCCAGGAGTGTCAATTTCAAGCTTGAAGACTTACAATACATCACTTAAAATTATGTTTTGTGCTAATATGAACATAATTGTTGTTCAGCAGTTTGGCATTTAAAGAATAGACATTTAGTCATTCAGTCTATTAAATAATATACACAATGTTATATACACAACCATACATATAGCTATTATTTACTGTACATTATGTACATGTGAACATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39256
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000087694 Nonsense 1177 1634 16 26
ENSDART00000123812 None None 293 None 2
ENSDART00000126447 Nonsense 1130 1589 21 31
Genomic Location (Zv9):
Chromosome 19 (position 39351810)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 38215793
GRCz11 19 37802913
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATAGTACAAGGCAGAGGAGCGCCAGTCCTATCCGTCAGCCCAGTGAGAGG[A/T]AACAGTGTCCTTCCACCACAGAGAAAGAAATATGCACACTCAACTCCAAC
Long Flanking Sequence:
TATCATAAGCATTTTTTACAGTATGAAACACATTATGCCTATGGAGATTCATCATAAACTATATATACAAGTGTGTGTTTGTGTGTGTATGTGTGTGTCTGGGCATTATTGAGGATTCTCTCAGGCGAAGGTTACTCGCTGTGAATCCCAGGCTTTCTGCCACCAAACTGCAAGGGTTGCTAATTGCCATGGACGCTGAGAGTCTCCCTGCGGTGAAAATGCGCAAAGGCTTAAAACATCTTACACATGACATCAGAGACAGATTTATTTCCTTCAGAATGAGCTGCCAGTGGCTGAAATAGCAAGGAGAATGCAAAAGCCAAATAAATCTTATGCGCATATGCTGAATACGTCCTTCTCTCTGATTGTTCTTTGTGTTGTTCATTGAGCATTGTTTGTTCATTTAAAGCTTTGTTTTGTTTTTTGTTTTTTTGAAGCCGTGTAATGTGAATAGTACAAGGCAGAGGAGCGCCAGTCCTATCCGTCAGCCCAGTGAGAGG[A/T]AACAGTGTCCTTCCACCACAGAGAAAGAAATATGCACACTCAACTCCAACTGCTTCCATTACTCCTATAATATCACAGGTAACATCACTGCATCTTAACTAAACTGATGTGGCCGTTAGCTTTCAGACTGTTGCATTAAAATCTCTCTTTCATGGGATTCGTCATAGTATTTGTTTGTTTCTTCTCTTTTATTAAAAACTTTTGCCATTGTATTAATTTATATGTGCTAACTAACTAAAGTTAGTAGATTCATAATGAAATTGTTATTTTTAAAAAGACATAAAATATACAAATATAAATAAAGCATTTTACATGATATTTTAATAATAATAATAATAATAATAGTCATAATAATCGTAATAATAATAATAATAATAATACCCTATTTAGTTATTTATAGGTATTTTTCCCAAACTATTATAGCGTATAATAATTATTATTATTTACCTTTTTGCATTTTTTATTAGAACTTTAGTTTTTCTTCTTTTCTTTTTTTTTCA
Associated Phenotype:
Not determined